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The map label for this gene is 220905214

Identifier: 220905214

GI number: 220905214

Start: 2353158

End: 2354603

Strand: Reverse

Name: 220905214

Synonym: Ddes_1952

Alternate gene names: NA

Gene position: 2354603-2353158 (Counterclockwise)

Preceding gene: 220905216

Following gene: 220905213

Centisome position: 81.94

GC content: 62.79

Gene sequence:

>1446_bases
ATGGCTGCCCAACATATTGAGCCGCATCTGGTCATGGCCGATGAGCAGGGGAATATCTATGATGATGAGCGCCTGCTCAT
GGTCTGCCGCCGCGGTGCGCAGTGGGGCCTGCCACGGCCGGATGAACTTATGCCCCTGCCGGAAGAAAGTGAATTCTTTC
TGCTGCCGGGGCGTCAGGCCGTGGGCCTTGACCCGGACAGCGGCGAGATAGTCCAGCCCGAGGGCGAGGCCCAGCTTGCA
GTGGCGGCTTTTGCCGCTCCGGCGCACACCATTTCGGCGCATCCCGCCTATACCAGCGGTCCCGGCGCGCCTTTGCTGCC
CCTGTTTGCCTATGGAGCCGTGGGTTTTGCGCGAGGCCGCTTTTATGTCTGCGCGCGCAGGGTTGATGCCGATCAGCGTC
AGGTTTTTAGCCGCATTCCGCGACACCGTATAGAGCAGGGCGCGCGCAGGCTGCTGCGGGACTACCCCGGCAACCGCCTT
GTCCGGCATATTCTGGACAACTGCGTGGCCCGTTATGACTGCCCGGCGGCCCGCAATTTTGCCTTGGGCCGTTACGAAGC
GCCCCTGCCCACCTCCCGGGCCTGCAACGCCCGCTGTGTGGGCTGTATTTCGGCCCAGGAAAAGGATTCTCCTGTGGCCG
TGACCCCTCAGTGCCGGCTGGCTTTTACGCCGGATCCGAGGGAAGTGGCCGAGGTCATGCACATCCATGCCGGGCGTGAA
AGCCGCGCGCCCATCTATTCTTTCGGTCAGGGGTGTGAGGGTGACCCGCTCATGAATGCGGACCTGCTGGAAGAAAGCAT
ACGCCTCTTCCGTTCCGGCGGCGGCGCGGGAACCGTCAACTGCAACACCAACGCCTCGCGGCCGCAGGCTGTGGCCCGCC
TGGCAGAAGCCGGGCTGACCAGCATGCGGGTCAGCCTTAACAGCGCCCGTCCTGTTCTGTATGAGCGCTATTACCGCCCG
GTGGACTACTGTTTGGATGATGTGAAAGAATCCATACGCGCCGCCAGAAGCCGCGGAATTTTTGTGGCCCTGAACCTGCT
GTTCTTTCCCGGCATCACAGACACGGAAGAAGAGCTTGACGCCCTGGCGCGGATGGTGGGCGAAAACGGTGTGAGCATGA
TACAGTGGCGCAACCTCAACATTGACCCCGAATGGTACTTCAGGCTCATGAACGGGGGCGAAGGTTCCGGCGGCGGGCGG
CTTGAGTTTTCGCCCAGCATGGGGCTGACGCAGTTCATGAAGCGGTTGAAAAAGCTTTGTCCCTGGCTGCGTTACGGCTA
TTTTAACCCGTATGTGGGAGACAGGGCCGAACTTGAGGCGCCTGCGCCCGGTGACTGGAGCATGCCCGCGCCCCGTGCCA
AAGAAGGGGCCCTGGCACCCGGTGAAAGTGCGGACGGCAACGCGGGTAGCGCTGCAGGCGAGCCTGTTGCAGGCGAAAAT
TCCTGA

Upstream 100 bases:

>100_bases
ATTATGGAAAACATGAAAGGCCTCCAAAAGTACGGGCCGGGAATCCCCGGCCACGTAGGGCCGTTATATACGTTCGCCCG
CGCCGGGGCAAGGAGCTTTT

Downstream 100 bases:

>100_bases
GTGCTTTTTTGTTTTTTGTGAGCGCGATCACAGAATTGTGCACACATTTTCATATGGTAAAGACGCTGGCTGGCCGGCGT
CTTTACTGTTTCAGGCCTTC

Product: Radical SAM domain-containing protein

Products: NA

Alternate protein names: Radical SAM Domain-Containing Protein; Radical SAM Family Protein; Elongator /MiaB/NifB; Radical SAM Domain Family Protein

Number of amino acids: Translated: 481; Mature: 480

Protein sequence:

>481_residues
MAAQHIEPHLVMADEQGNIYDDERLLMVCRRGAQWGLPRPDELMPLPEESEFFLLPGRQAVGLDPDSGEIVQPEGEAQLA
VAAFAAPAHTISAHPAYTSGPGAPLLPLFAYGAVGFARGRFYVCARRVDADQRQVFSRIPRHRIEQGARRLLRDYPGNRL
VRHILDNCVARYDCPAARNFALGRYEAPLPTSRACNARCVGCISAQEKDSPVAVTPQCRLAFTPDPREVAEVMHIHAGRE
SRAPIYSFGQGCEGDPLMNADLLEESIRLFRSGGGAGTVNCNTNASRPQAVARLAEAGLTSMRVSLNSARPVLYERYYRP
VDYCLDDVKESIRAARSRGIFVALNLLFFPGITDTEEELDALARMVGENGVSMIQWRNLNIDPEWYFRLMNGGEGSGGGR
LEFSPSMGLTQFMKRLKKLCPWLRYGYFNPYVGDRAELEAPAPGDWSMPAPRAKEGALAPGESADGNAGSAAGEPVAGEN
S

Sequences:

>Translated_481_residues
MAAQHIEPHLVMADEQGNIYDDERLLMVCRRGAQWGLPRPDELMPLPEESEFFLLPGRQAVGLDPDSGEIVQPEGEAQLA
VAAFAAPAHTISAHPAYTSGPGAPLLPLFAYGAVGFARGRFYVCARRVDADQRQVFSRIPRHRIEQGARRLLRDYPGNRL
VRHILDNCVARYDCPAARNFALGRYEAPLPTSRACNARCVGCISAQEKDSPVAVTPQCRLAFTPDPREVAEVMHIHAGRE
SRAPIYSFGQGCEGDPLMNADLLEESIRLFRSGGGAGTVNCNTNASRPQAVARLAEAGLTSMRVSLNSARPVLYERYYRP
VDYCLDDVKESIRAARSRGIFVALNLLFFPGITDTEEELDALARMVGENGVSMIQWRNLNIDPEWYFRLMNGGEGSGGGR
LEFSPSMGLTQFMKRLKKLCPWLRYGYFNPYVGDRAELEAPAPGDWSMPAPRAKEGALAPGESADGNAGSAAGEPVAGEN
S
>Mature_480_residues
AAQHIEPHLVMADEQGNIYDDERLLMVCRRGAQWGLPRPDELMPLPEESEFFLLPGRQAVGLDPDSGEIVQPEGEAQLAV
AAFAAPAHTISAHPAYTSGPGAPLLPLFAYGAVGFARGRFYVCARRVDADQRQVFSRIPRHRIEQGARRLLRDYPGNRLV
RHILDNCVARYDCPAARNFALGRYEAPLPTSRACNARCVGCISAQEKDSPVAVTPQCRLAFTPDPREVAEVMHIHAGRES
RAPIYSFGQGCEGDPLMNADLLEESIRLFRSGGGAGTVNCNTNASRPQAVARLAEAGLTSMRVSLNSARPVLYERYYRPV
DYCLDDVKESIRAARSRGIFVALNLLFFPGITDTEEELDALARMVGENGVSMIQWRNLNIDPEWYFRLMNGGEGSGGGRL
EFSPSMGLTQFMKRLKKLCPWLRYGYFNPYVGDRAELEAPAPGDWSMPAPRAKEGALAPGESADGNAGSAAGEPVAGENS

Specific function: Unknown

COG id: COG1180

COG function: function code O; Pyruvate-formate lyase-activating enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52641; Mature: 52510

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAQHIEPHLVMADEQGNIYDDERLLMVCRRGAQWGLPRPDELMPLPEESEFFLLPGRQA
CCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCE
VGLDPDSGEIVQPEGEAQLAVAAFAAPAHTISAHPAYTSGPGAPLLPLFAYGAVGFARGR
ECCCCCCCCEECCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
FYVCARRVDADQRQVFSRIPRHRIEQGARRLLRDYPGNRLVRHILDNCVARYDCPAARNF
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC
ALGRYEAPLPTSRACNARCVGCISAQEKDSPVAVTPQCRLAFTPDPREVAEVMHIHAGRE
CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCEEEECCCHHHHHHHHHHHCCCC
SRAPIYSFGQGCEGDPLMNADLLEESIRLFRSGGGAGTVNCNTNASRPQAVARLAEAGLT
CCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCHH
SMRVSLNSARPVLYERYYRPVDYCLDDVKESIRAARSRGIFVALNLLFFPGITDTEEELD
EEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEEEEHHHCCCCCCCHHHHH
ALARMVGENGVSMIQWRNLNIDPEWYFRLMNGGEGSGGGRLEFSPSMGLTQFMKRLKKLC
HHHHHHCCCCCEEEEEECCCCCHHHHEEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHH
PWLRYGYFNPYVGDRAELEAPAPGDWSMPAPRAKEGALAPGESADGNAGSAAGEPVAGEN
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
S
C
>Mature Secondary Structure 
AAQHIEPHLVMADEQGNIYDDERLLMVCRRGAQWGLPRPDELMPLPEESEFFLLPGRQA
CCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCE
VGLDPDSGEIVQPEGEAQLAVAAFAAPAHTISAHPAYTSGPGAPLLPLFAYGAVGFARGR
ECCCCCCCCEECCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
FYVCARRVDADQRQVFSRIPRHRIEQGARRLLRDYPGNRLVRHILDNCVARYDCPAARNF
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC
ALGRYEAPLPTSRACNARCVGCISAQEKDSPVAVTPQCRLAFTPDPREVAEVMHIHAGRE
CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCEEEECCCHHHHHHHHHHHCCCC
SRAPIYSFGQGCEGDPLMNADLLEESIRLFRSGGGAGTVNCNTNASRPQAVARLAEAGLT
CCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCHH
SMRVSLNSARPVLYERYYRPVDYCLDDVKESIRAARSRGIFVALNLLFFPGITDTEEELD
EEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEEEEHHHCCCCCCCHHHHH
ALARMVGENGVSMIQWRNLNIDPEWYFRLMNGGEGSGGGRLEFSPSMGLTQFMKRLKKLC
HHHHHHCCCCCEEEEEECCCCCHHHHEEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHH
PWLRYGYFNPYVGDRAELEAPAPGDWSMPAPRAKEGALAPGESADGNAGSAAGEPVAGEN
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA