Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is fldA [C]
Identifier: 220905213
GI number: 220905213
Start: 2352438
End: 2352884
Strand: Reverse
Name: fldA [C]
Synonym: Ddes_1951
Alternate gene names: 220905213
Gene position: 2352884-2352438 (Counterclockwise)
Preceding gene: 220905214
Following gene: 220905212
Centisome position: 81.88
GC content: 57.05
Gene sequence:
>447_bases ATGAGCAAGGTTTTGATTCTCTTTGGTTCCAGCACCGGCAATACGGAAAGCATCGCGCAAAAGCTGGAAGAGCTTGTAGC GGCTGGCGGGCATGAAGTGACCCTGCTGAATGCCGCCGAAGCGTCGGCCGACAATCTGGCAGACGGTTATGACGCCGTGC TCATGGGCTGCTCGGCTTGGGGCATGGAAGATCTGGAACTGCAGGATGACTTTGCCCCCCTGTTTGACGAAATGGAAAAC ATGGGCCTCAAGGGCAAGAAGCTGGCCGCCTTTGCCTCGGGTGATATGGAATATGAGCATTACTGCGGCGCGGTGCCTGC CATTGAAGAAAAGGCCAGGGGGCTGGGTGCGGAAGTCATCTGCGAAGGCCTCAAGATAGAAGGTGATGCCTCCAGCGATC CGGATGCCGTGAGCGCCTTTGCCGAAGACGTGCTCAAGAAGCTGTAG
Upstream 100 bases:
>100_bases TTCGGCTGCATGGTCTTGACATGGGAGTGGAAGGTATTTATCTCAGTTGAAAATGAATTTCATTTTATAATTGTCCGGCC ATAGCCGGAAGGAGCGTATC
Downstream 100 bases:
>100_bases GCGTCGGCAGGCCTGACCGTATCGGCCGTTCGCGCGGCGATACGCGGTGGGCGGAGCCACAGGCGTCGTCAGACCCAGGC ACCATCCTGCGGCGAAAAAA
Product: flavodoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MSKVLILFGSSTGNTESIAQKLEELVAAGGHEVTLLNAAEASADNLADGYDAVLMGCSAWGMEDLELQDDFAPLFDEMEN MGLKGKKLAAFASGDMEYEHYCGAVPAIEEKARGLGAEVICEGLKIEGDASSDPDAVSAFAEDVLKKL
Sequences:
>Translated_148_residues MSKVLILFGSSTGNTESIAQKLEELVAAGGHEVTLLNAAEASADNLADGYDAVLMGCSAWGMEDLELQDDFAPLFDEMEN MGLKGKKLAAFASGDMEYEHYCGAVPAIEEKARGLGAEVICEGLKIEGDASSDPDAVSAFAEDVLKKL >Mature_147_residues SKVLILFGSSTGNTESIAQKLEELVAAGGHEVTLLNAAEASADNLADGYDAVLMGCSAWGMEDLELQDDFAPLFDEMENM GLKGKKLAAFASGDMEYEHYCGAVPAIEEKARGLGAEVICEGLKIEGDASSDPDAVSAFAEDVLKKL
Specific function: Low-potential electron donor to a number of redox enzymes
COG id: COG0716
COG function: function code C; Flavodoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain
Homologues:
None
Paralogues:
None
Copy number: 242 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): FLAW_DESDA (P80312)
Other databases:
- EMBL: CP001358 - PIR: S42570 - RefSeq: YP_002480525.1 - PDB: 3KAP - PDB: 3KAQ - PDBsum: 3KAP - PDBsum: 3KAQ - ProteinModelPortal: P80312 - GeneID: 7285667 - GenomeReviews: CP001358_GR - KEGG: dds:Ddes_1951 - HOGENOM: HBG686708 - GO: GO:0006810 - InterPro: IPR010087 - InterPro: IPR008254 - InterPro: IPR001226 - TIGRFAMs: TIGR01753
Pfam domain/function: PF00258 Flavodoxin_1
EC number: NA
Molecular weight: Translated: 15567; Mature: 15435
Theoretical pI: Translated: 3.88; Mature: 3.88
Prosite motif: PS00201 FLAVODOXIN; PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVLILFGSSTGNTESIAQKLEELVAAGGHEVTLLNAAEASADNLADGYDAVLMGCSAW CCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCCC GMEDLELQDDFAPLFDEMENMGLKGKKLAAFASGDMEYEHYCGAVPAIEEKARGLGAEVI CCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHCCCCCCHHHHHHCCCHHHH CEGLKIEGDASSDPDAVSAFAEDVLKKL HCCCEECCCCCCCHHHHHHHHHHHHHHC >Mature Secondary Structure SKVLILFGSSTGNTESIAQKLEELVAAGGHEVTLLNAAEASADNLADGYDAVLMGCSAW CEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCCC GMEDLELQDDFAPLFDEMENMGLKGKKLAAFASGDMEYEHYCGAVPAIEEKARGLGAEVI CCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHCCCCCCHHHHHHCCCHHHH CEGLKIEGDASSDPDAVSAFAEDVLKKL HCCCEECCCCCCCHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8143752