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The map label for this gene is flgC [H]

Identifier: 220904841

GI number: 220904841

Start: 1896082

End: 1896519

Strand: Reverse

Name: flgC [H]

Synonym: Ddes_1575

Alternate gene names: 220904841

Gene position: 1896519-1896082 (Counterclockwise)

Preceding gene: 220904842

Following gene: 220904840

Centisome position: 66.0

GC content: 55.71

Gene sequence:

>438_bases
ATGGACTTCATGACAGCATTTGACATAAGCGCATCGGGGCTTGCAGCCGACCGTACGCGTATCAATACCATATCCATGAA
CCTGGCTAATGCCAAAACCACACGTACGCCCTTGGGCGGGCCATACCGGCGGCGCAGCGTGGTGCAGCAGACGGCTGACG
TGGATGATCCTTTTTCCGTCCATATGCGCTCGGCGCTTGACCGTGCGGTCAAGGGGGTGCGCGTGATGGCCGTAACTATG
GATAACCGCCCCTTCAAGCGGGTGTATGAACCGGGCAATCCCGATGCCAACGCCGAAGGCTATGTAATGTACCCCGACAT
CAATGTGGTGGAAGAAATGGCCAACCTCATGACGGCACAACGCAACTTTGAGGCCAACGTCACCACTGTGGACGCCATCA
AGGGCATGTATGTCAAAGCCCTTGAAATCGGCAAATAA

Upstream 100 bases:

>100_bases
AGTAACAACGCGTATTCAGGGCAGGCAGCCTGCCGGACGGGAACAGCATTTTCGTAGCCAGCCCGGCGGGACAGCATTGA
TTTGAGATCAGGAGAACGCC

Downstream 100 bases:

>100_bases
GATTTTTACCGCCCATCTGACCGGGCGGAGCCGCTGAGGCAATTCAGGAGAAGGCCATGAGCATACAGTCAGTGGGCATG
CGCGCGTACAGTGAGGCCAT

Product: flagellar basal-body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MDFMTAFDISASGLAADRTRINTISMNLANAKTTRTPLGGPYRRRSVVQQTADVDDPFSVHMRSALDRAVKGVRVMAVTM
DNRPFKRVYEPGNPDANAEGYVMYPDINVVEEMANLMTAQRNFEANVTTVDAIKGMYVKALEIGK

Sequences:

>Translated_145_residues
MDFMTAFDISASGLAADRTRINTISMNLANAKTTRTPLGGPYRRRSVVQQTADVDDPFSVHMRSALDRAVKGVRVMAVTM
DNRPFKRVYEPGNPDANAEGYVMYPDINVVEEMANLMTAQRNFEANVTTVDAIKGMYVKALEIGK
>Mature_145_residues
MDFMTAFDISASGLAADRTRINTISMNLANAKTTRTPLGGPYRRRSVVQQTADVDDPFSVHMRSALDRAVKGVRVMAVTM
DNRPFKRVYEPGNPDANAEGYVMYPDINVVEEMANLMTAQRNFEANVTTVDAIKGMYVKALEIGK

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=145, Percent_Identity=40.6896551724138, Blast_Score=108, Evalue=2e-25,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 16053; Mature: 16053

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.9 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.9 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFMTAFDISASGLAADRTRINTISMNLANAKTTRTPLGGPYRRRSVVQQTADVDDPFSV
CCCCEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHH
HMRSALDRAVKGVRVMAVTMDNRPFKRVYEPGNPDANAEGYVMYPDINVVEEMANLMTAQ
HHHHHHHHHHCCEEEEEEEECCCCHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHH
RNFEANVTTVDAIKGMYVKALEIGK
CCCCCCCEEHHHHCCCEEEEEECCC
>Mature Secondary Structure
MDFMTAFDISASGLAADRTRINTISMNLANAKTTRTPLGGPYRRRSVVQQTADVDDPFSV
CCCCEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHH
HMRSALDRAVKGVRVMAVTMDNRPFKRVYEPGNPDANAEGYVMYPDINVVEEMANLMTAQ
HHHHHHHHHHCCEEEEEEEECCCCHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHH
RNFEANVTTVDAIKGMYVKALEIGK
CCCCCCCEEHHHHCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1905667; 9384377 [H]