Click here to switch to the map view.

The map label for this gene is fliE [H]

Identifier: 220904840

GI number: 220904840

Start: 1895579

End: 1896025

Strand: Reverse

Name: fliE [H]

Synonym: Ddes_1574

Alternate gene names: 220904840

Gene position: 1896025-1895579 (Counterclockwise)

Preceding gene: 220904841

Following gene: 220904839

Centisome position: 65.98

GC content: 56.15

Gene sequence:

>447_bases
ATGAGCATACAGTCAGTGGGCATGCGCGCGTACAGTGAGGCCATGCAGCATTTCAACAGGGTAGAGGGCAGCCTGCAGCA
GGGTTCGTCTGTCAGCGGCAAAACGCTTTTTTCCCGCACCCTGGATCAGAGCCTTGCCCGCAGCAAGGTGGATACCGGCG
AAAATTTCGGCGCCCAGGTGGACATGGTGCAGTTTCCCGGCAAGGCGCATACCCCGGTAACTTCCGAGAGCAGCTTTACC
GGAACCCTCAGGGATTCACTGAACAAGGTAAACCAGTTGCAGGGCGTCAAGGATGAAGCCATCAGCGAATTTGCTTCGGG
CCGCACCCAGAACGTGCAGGAACTCATGATAACCATGCAGAAATCCAGCCTTGCCATGAAGCTGACTACCGCCGTGCGCG
GCAAGGTGCTGGAAGCCTACAAGGAAATTTCCAAGATGCAGTTCTAG

Upstream 100 bases:

>100_bases
CCATCAAGGGCATGTATGTCAAAGCCCTTGAAATCGGCAAATAAGATTTTTACCGCCCATCTGACCGGGCGGAGCCGCTG
AGGCAATTCAGGAGAAGGCC

Downstream 100 bases:

>100_bases
AGCGGCTCAACCTTGAAAAATCTGGAACACGCTGCGTGGATTTGAGACAAACCCACATCGCGAAGTGTTTGCAAGGCAAC
CTTGCTTCGGCCGTTGCGAC

Product: flagellar hook-basal body complex subunit FliE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MSIQSVGMRAYSEAMQHFNRVEGSLQQGSSVSGKTLFSRTLDQSLARSKVDTGENFGAQVDMVQFPGKAHTPVTSESSFT
GTLRDSLNKVNQLQGVKDEAISEFASGRTQNVQELMITMQKSSLAMKLTTAVRGKVLEAYKEISKMQF

Sequences:

>Translated_148_residues
MSIQSVGMRAYSEAMQHFNRVEGSLQQGSSVSGKTLFSRTLDQSLARSKVDTGENFGAQVDMVQFPGKAHTPVTSESSFT
GTLRDSLNKVNQLQGVKDEAISEFASGRTQNVQELMITMQKSSLAMKLTTAVRGKVLEAYKEISKMQF
>Mature_147_residues
SIQSVGMRAYSEAMQHFNRVEGSLQQGSSVSGKTLFSRTLDQSLARSKVDTGENFGAQVDMVQFPGKAHTPVTSESSFTG
TLRDSLNKVNQLQGVKDEAISEFASGRTQNVQELMITMQKSSLAMKLTTAVRGKVLEAYKEISKMQF

Specific function: Unknown

COG id: COG1677

COG function: function code NU; Flagellar hook-basal body protein

Gene ontology:

Cell location: Bacterial flagellum basal body (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001624 [H]

Pfam domain/function: PF02049 FliE [H]

EC number: NA

Molecular weight: Translated: 16234; Mature: 16102

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIQSVGMRAYSEAMQHFNRVEGSLQQGSSVSGKTLFSRTLDQSLARSKVDTGENFGAQV
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEE
DMVQFPGKAHTPVTSESSFTGTLRDSLNKVNQLQGVKDEAISEFASGRTQNVQELMITMQ
EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHH
KSSLAMKLTTAVRGKVLEAYKEISKMQF
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SIQSVGMRAYSEAMQHFNRVEGSLQQGSSVSGKTLFSRTLDQSLARSKVDTGENFGAQV
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEE
DMVQFPGKAHTPVTSESSFTGTLRDSLNKVNQLQGVKDEAISEFASGRTQNVQELMITMQ
EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHH
KSSLAMKLTTAVRGKVLEAYKEISKMQF
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]