| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is zraS [H]
Identifier: 220904834
GI number: 220904834
Start: 1883844
End: 1885547
Strand: Reverse
Name: zraS [H]
Synonym: Ddes_1567
Alternate gene names: 220904834
Gene position: 1885547-1883844 (Counterclockwise)
Preceding gene: 220904835
Following gene: 220904833
Centisome position: 65.62
GC content: 55.11
Gene sequence:
>1704_bases ATGTCCGCAGTCGCTCCCGCGCCCCATCGCGGGTACAAGGTCATCTATCGCCGCCTGCTCGTTACGCTGCTGCTTATGGC GCTCACGCCGCTGGTGGCTCTGGGGCTGTTCTGCCTGGACAGGCTGAGCGCCATCTATGACGAAAAGATCAGCGCGGGCA TCGAGGCTGTAGCCAGCAGCAAACACCGCGCGCTGGATACATTTATGGTGGAGCGCATCGCCCAGATAAAAAATCTGGCC TTCACCCATCCTTATGCAGAATTGAGCAATTCCGCGCGTCTGAGCGATATCTTCAGCATCATGCAGAACAACAGCCGCTC CTTTGTGGATGTGGGTGTCATCGGCATGGACGGCCGCCATGTCTCCTATGTGGGACCATATGACCTCAGCGACAACAATT ACTCCGACACTCCCTGGTTCAGAGAGGTGCTGCGCAAGGGTGTGTATGTGAGTGATGTGTTTATGGGCTACAGGAACGAG CCTCATTTCATCATAGCGGTGCTGCGGCACGAGGGGGGGCGCAGCTACATAGTACGGGCTACCATTGATATGGACGCTAT GGGGGCCTTGCTGCGTCGCGTGTATTCCGGTCCGCACAGCGATGCCTTTCTGGTCAATGCCAGAGGCGAGCTCCAGACGG ATTCGCGCTATCACGGCAAAAGCATGGCGCGGTTTGGTGTGCCACTGCCGGATATGACCCGCAAAAATGTGTCCACCCAG CATCTGACCACATCCAAAGGGCAGGAAATGCTGGCCGCCATGATGCCTCTGGAGTCCATGCCCTGGGCGCTTGTGGTGCT TGATGATGTGCGTGACAGCCTCCAACCGTTACGGCAACTCAAAGCGCTGATTGTTTTTTTCATGATTCTGGGCAGCGGGC TTATCTGTATGGGGGCCGAACTCTGCACCCGGCGGCTCGTGGCTTCGCTTGAAGAGTCTGACCAGAAACAGGCCCATATC GATGCCCGCATGCTTCAGTCCAGCAAAATGGCGGCCCTTGGCAAAATGGCCGCCGGGGTGGCCCATGAGGTAAACAATCC CCTTATGCTCATTCAGGAAAATGCGGGCTGGATACGTGACCTGCTGGACGATGAAAAACCCGAAGCAATGAAAAATTATC AAGAAATACTGGAAAGTACAGAAAAAATTGACCAGCATGTCAAGCGCGCCAAAGGCATAACCCAGCGCATGCTCGGCTTT GGCCGCCGCATGAACCCCGGCCGTACGGAAATACTGATCAACTCCCTGACGGATCAGGCTGCTGAAATGCTTAAAACAGA AGCCACCAATCGCAATATTGACATTATCAGAGAGTATGATCCGCAGGTGCCGGTTATCCTGTCAGATCCCGCGCAGCTTG AGCAGATTTTTATCAATATTATCGACAACGCCATTGATGCCATCGGCAAAAACGGCTCTCTGACCATTCGCACCCTTGCC TGGAAGAAGGGTGTTCGCATATTGTTTACCGATAGCGGTCCCGGTATGGATCAGGAAACCGTAACCCGTATTTTTGATCC TTTTTTTACTACCAAGAAGGTGGGCGAGGGTACGGGCCTTGGGCTGGCTATCTGTTATACCATACTTGAAAAGCTGGGCG GCCGCATTGAGGTGCAGAGCCGGCTGGGAGAAGGAACCACCTTCAGCATAACCCTGCCCGCCGAACCGCCGCAGCTTCCG CCGGAAGACGGTCTGCCAGCCTGA
Upstream 100 bases:
>100_bases AGGTGGCCGCCCGGCGGGAGGAAATGCTCGAACACTGCCGTATGCTGTTCAAGGGCGAAAAATTGCCGCAGGCCGCAACC GGCGTGGAGGAATCATAGCC
Downstream 100 bases:
>100_bases GGCACGTACCGGCGAATGAAGTAATCTGATGATGCCGGGGGCGGCCTTGGGCCTGCCCTAACTATACGCTCCGGCGTCAC TTGCTGCACGAGACACGTCA
Product: histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 567; Mature: 566
Protein sequence:
>567_residues MSAVAPAPHRGYKVIYRRLLVTLLLMALTPLVALGLFCLDRLSAIYDEKISAGIEAVASSKHRALDTFMVERIAQIKNLA FTHPYAELSNSARLSDIFSIMQNNSRSFVDVGVIGMDGRHVSYVGPYDLSDNNYSDTPWFREVLRKGVYVSDVFMGYRNE PHFIIAVLRHEGGRSYIVRATIDMDAMGALLRRVYSGPHSDAFLVNARGELQTDSRYHGKSMARFGVPLPDMTRKNVSTQ HLTTSKGQEMLAAMMPLESMPWALVVLDDVRDSLQPLRQLKALIVFFMILGSGLICMGAELCTRRLVASLEESDQKQAHI DARMLQSSKMAALGKMAAGVAHEVNNPLMLIQENAGWIRDLLDDEKPEAMKNYQEILESTEKIDQHVKRAKGITQRMLGF GRRMNPGRTEILINSLTDQAAEMLKTEATNRNIDIIREYDPQVPVILSDPAQLEQIFINIIDNAIDAIGKNGSLTIRTLA WKKGVRILFTDSGPGMDQETVTRIFDPFFTTKKVGEGTGLGLAICYTILEKLGGRIEVQSRLGEGTTFSITLPAEPPQLP PEDGLPA
Sequences:
>Translated_567_residues MSAVAPAPHRGYKVIYRRLLVTLLLMALTPLVALGLFCLDRLSAIYDEKISAGIEAVASSKHRALDTFMVERIAQIKNLA FTHPYAELSNSARLSDIFSIMQNNSRSFVDVGVIGMDGRHVSYVGPYDLSDNNYSDTPWFREVLRKGVYVSDVFMGYRNE PHFIIAVLRHEGGRSYIVRATIDMDAMGALLRRVYSGPHSDAFLVNARGELQTDSRYHGKSMARFGVPLPDMTRKNVSTQ HLTTSKGQEMLAAMMPLESMPWALVVLDDVRDSLQPLRQLKALIVFFMILGSGLICMGAELCTRRLVASLEESDQKQAHI DARMLQSSKMAALGKMAAGVAHEVNNPLMLIQENAGWIRDLLDDEKPEAMKNYQEILESTEKIDQHVKRAKGITQRMLGF GRRMNPGRTEILINSLTDQAAEMLKTEATNRNIDIIREYDPQVPVILSDPAQLEQIFINIIDNAIDAIGKNGSLTIRTLA WKKGVRILFTDSGPGMDQETVTRIFDPFFTTKKVGEGTGLGLAICYTILEKLGGRIEVQSRLGEGTTFSITLPAEPPQLP PEDGLPA >Mature_566_residues SAVAPAPHRGYKVIYRRLLVTLLLMALTPLVALGLFCLDRLSAIYDEKISAGIEAVASSKHRALDTFMVERIAQIKNLAF THPYAELSNSARLSDIFSIMQNNSRSFVDVGVIGMDGRHVSYVGPYDLSDNNYSDTPWFREVLRKGVYVSDVFMGYRNEP HFIIAVLRHEGGRSYIVRATIDMDAMGALLRRVYSGPHSDAFLVNARGELQTDSRYHGKSMARFGVPLPDMTRKNVSTQH LTTSKGQEMLAAMMPLESMPWALVVLDDVRDSLQPLRQLKALIVFFMILGSGLICMGAELCTRRLVASLEESDQKQAHID ARMLQSSKMAALGKMAAGVAHEVNNPLMLIQENAGWIRDLLDDEKPEAMKNYQEILESTEKIDQHVKRAKGITQRMLGFG RRMNPGRTEILINSLTDQAAEMLKTEATNRNIDIIREYDPQVPVILSDPAQLEQIFINIIDNAIDAIGKNGSLTIRTLAW KKGVRILFTDSGPGMDQETVTRIFDPFFTTKKVGEGTGLGLAICYTILEKLGGRIEVQSRLGEGTTFSITLPAEPPQLPP EDGLPA
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=239, Percent_Identity=32.2175732217573, Blast_Score=132, Evalue=8e-32, Organism=Escherichia coli, GI1788549, Length=235, Percent_Identity=33.6170212765957, Blast_Score=126, Evalue=3e-30, Organism=Escherichia coli, GI1790300, Length=250, Percent_Identity=29.2, Blast_Score=102, Evalue=5e-23, Organism=Escherichia coli, GI145693157, Length=284, Percent_Identity=27.8169014084507, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1788393, Length=222, Percent_Identity=24.3243243243243, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI48994928, Length=125, Percent_Identity=32.8, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1786912, Length=227, Percent_Identity=24.6696035242291, Blast_Score=63, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 63013; Mature: 62882
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVAPAPHRGYKVIYRRLLVTLLLMALTPLVALGLFCLDRLSAIYDEKISAGIEAVASS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KHRALDTFMVERIAQIKNLAFTHPYAELSNSARLSDIFSIMQNNSRSFVDVGVIGMDGRH HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCE VSYVGPYDLSDNNYSDTPWFREVLRKGVYVSDVFMGYRNEPHFIIAVLRHEGGRSYIVRA EEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEEEECCCCEEEEEE TIDMDAMGALLRRVYSGPHSDAFLVNARGELQTDSRYHGKSMARFGVPLPDMTRKNVSTQ EECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCHHCCCCHH HLTTSKGQEMLAAMMPLESMPWALVVLDDVRDSLQPLRQLKALIVFFMILGSGLICMGAE HHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LCTRRLVASLEESDQKQAHIDARMLQSSKMAALGKMAAGVAHEVNNPLMLIQENAGWIRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHH LLDDEKPEAMKNYQEILESTEKIDQHVKRAKGITQRMLGFGRRMNPGRTEILINSLTDQA HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH AEMLKTEATNRNIDIIREYDPQVPVILSDPAQLEQIFINIIDNAIDAIGKNGSLTIRTLA HHHHHHHCCCCCCEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE WKKGVRILFTDSGPGMDQETVTRIFDPFFTTKKVGEGTGLGLAICYTILEKLGGRIEVQS ECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEHH RLGEGTTFSITLPAEPPQLPPEDGLPA HCCCCCEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure SAVAPAPHRGYKVIYRRLLVTLLLMALTPLVALGLFCLDRLSAIYDEKISAGIEAVASS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KHRALDTFMVERIAQIKNLAFTHPYAELSNSARLSDIFSIMQNNSRSFVDVGVIGMDGRH HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCE VSYVGPYDLSDNNYSDTPWFREVLRKGVYVSDVFMGYRNEPHFIIAVLRHEGGRSYIVRA EEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEEEECCCCEEEEEE TIDMDAMGALLRRVYSGPHSDAFLVNARGELQTDSRYHGKSMARFGVPLPDMTRKNVSTQ EECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCHHCCCCHH HLTTSKGQEMLAAMMPLESMPWALVVLDDVRDSLQPLRQLKALIVFFMILGSGLICMGAE HHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LCTRRLVASLEESDQKQAHIDARMLQSSKMAALGKMAAGVAHEVNNPLMLIQENAGWIRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHH LLDDEKPEAMKNYQEILESTEKIDQHVKRAKGITQRMLGFGRRMNPGRTEILINSLTDQA HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH AEMLKTEATNRNIDIIREYDPQVPVILSDPAQLEQIFINIIDNAIDAIGKNGSLTIRTLA HHHHHHHCCCCCCEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE WKKGVRILFTDSGPGMDQETVTRIFDPFFTTKKVGEGTGLGLAICYTILEKLGGRIEVQS ECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEHH RLGEGTTFSITLPAEPPQLPPEDGLPA HCCCCCEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 2666400; 11243806 [H]