| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is ppsA [H]
Identifier: 220904835
GI number: 220904835
Start: 1885550
End: 1888159
Strand: Reverse
Name: ppsA [H]
Synonym: Ddes_1568
Alternate gene names: 220904835
Gene position: 1888159-1885550 (Counterclockwise)
Preceding gene: 220904836
Following gene: 220904834
Centisome position: 65.71
GC content: 61.69
Gene sequence:
>2610_bases ATGCCACTCTCACGCCTTTTGGGCTTTTTTTCGCGGACCGCCCGACGGGCCGCAGCCGGAGCCTCGGCTTCAGACAGCGA GGCCGAGCGCTTCTTTGCCCTGCGGCATCATTCTTTCAAGCTTTTCCTCACGGCATGGAACACTTTTCAGGAAACCATGA CCGCCCTTGAATACACCCTGTGCTGCGACCATCCCTTCGGACTTTACAGGGTGCGCGCCCTGTGTACCAGTATGGCCACA CAGGCGTTTCAGTGTATCAAGCAGCTGGAACGGCTTGATCCCGCCCCCTGCGAAGCCCTGTACGCAAGATTTTCCGAACT GCAGAAAATGGTGGCGGATGACGTGTACGAGCCGGAGTCCTGTCTTCTGGGGCCGCTTGTGCTGCCGCTGGGACCGGATG AAACCGATATGGGGGCGCTCAGCGGCGAGGGACGTTCTCCGCTGGTTGACCCTGTAACCCTGCGGCTGGAAGACGTGCGC CGCCGCCTGCCGGGCCTGATACCCAGAGGTTTTGTGGTTACTGCCGTGGGCTGCCAGCATTTTTTCCAGAGCGGCGACCT TCAGAGCGAGATCAACCGGCGCATACAGGCTGCCGGGGGCCTTGCCCCCAAGCATCTTGCCAAGCTTTCGCGCAGCCTCG GCCAGCTGGTGGAAGATACCCCCATGCCCCAGGATCTGGCGGCGGAAATTCTGACTGCTGTCGCCCGTTTGAGGGCGTCC TGTCCCGAGGGGATGCGGCTTGTACTGCGCGGGCGCTTGTGGCCGCCCGAGGCCCAGGGCAGCGATGACCCCGGCCTTGT GCTCTGGGGGCCGTCAGTGCCGCTGGAAGCCATGGACGAAGAAGTGCTCCACGCTGTTCAGCTGACCCTGGCCCGCAAGC AGCGCGCTCAGGCCCTTGTGTACCGGCGCGCCCGGGGCCTTACCGAGGCTGGCGCCGGTGTGTGTGTTACCTGTATGGCA GTGGAGGACGGCTCTTGGGGCGGGCTTGCCCATTCGTGCAGCCCGGTGAAGGCGCACGGCGACCATGCCCACGTTTATGC CTGCCGCGGTTTGCCGCAGGAACTGGACTATTCTGTTCTGCCCGCAGACCATGCCACTGTGGACAGGCGGCCGCCGTATG ATGTCATCAGTCTTGTGGGGCCTCCCGGAACGGCTCGTCCTCTGCTTGAAGCCGATACCGCCAGAGAAGTGGCCGCGCTG GCCCTTGATCTTGAGGCCGATTTCGGCTGGCCTGTTTCTCTTTCGTGGGTGCGCACGCCGCAGGGGCATCTGCGCCTTTT GCTGGCACGGCCCATTCCCCTGCCTGTGGATGCGGTGGACATGCCGCCGGTAACCGCTGATGTGCGCAGTAATCTGCGGC TTACGGGGGGCTATACGGTCAGCCCCGGCCGGGTGGCGGGGCCGGTTTGCGTAGCGCGGCGATGGGAAGAGGCCAGGCGT TTTCCCGCGGGCGGCATTCTTGTGGTGCCTGACGATAATTACCGCTGGGGCGCCTTGATGGACCGCGCCGCGGGCATTAT CGCCGAAGAAGGCCTGCCCGGTTCACGGCTGGCATCGCTGGCGCGCGAATTTGGCAAACCGGCCATTTTCGGGCTGGACA ATGCCACGGAAATACTGAAAAGCGGGCAACGGATTACCCTGTGCTCGGACATCTGCCAGGTCTATGTTGACAGGCTGGAA TCCCTGTTGCCCAACGTGCCGCCCGGGCGGGACTATATGCCCGGCAGCCCCGTGTACCGCATCCTGCAAAAGGCCTCGGC CCGCATACTGCCTTTGACGATGGATGTTGACAGTCCCGAATTCAGGGCTTCCAACTGTCAGACATACCACGATATTGCCC GCTACTGCCATGAAAGGGCCGTGAGCGCCATGTTCAGCCTCGGGGCGGAGAAAAAGTACGCGCCGCAACGTGTAAAGCAG TTGCGCGACAAGGTGCTCAAGCAGTTCTGGGTGGTGAACCTCAGTGACGGCTTTGCGGTTACCCCTCCCGGGCCGGTCAT TGATATTGAGCAGATATCTTCGGTACCCATGCGTGCGCTCTGGCATGGCATGAACGCCTACGCCTGGCAGGGGCCGCCGC CCGTGGACGGCAAGGGGTTTCTTTCGGTGCTGTTTGAGGCCACGGCCAACCCCAACCTGGATCCGGCCGCACAGACTGCC TACTTTTCTGAAAAAAACTACTTTATGATCTCGCGCGACTATTGCAGCCTGCATTCGCGTTTTGGCTTTCATTTTGTCTC TGTAGAGGCGCGCCTTGGCGAGCGCACCCCTGAGAATTATCTCACCTTTCACCTGCGGGGCGGCGCGGCCAATATTGAGC GGCGCATCCTGCGCGTGCGTTTTGTGGCTGAAATTTTGTGGGAATTCGGCTTTGCCCCCATGGTGCGCAATGATGCGGTC AGCGCCACCCTCAAGGGTATGGATCGTGAAGAAGGTGAATTTTTGCTGGCAGTGGCGGGATATATGACCATCCATACCCG CCAGCTGGATATGATCATGCAGGATGCGGCCCAGGTGGCCGCCCGGCGGGAGGAAATGCTCGAACACTGCCGTATGCTGT TCAAGGGCGAAAAATTGCCGCAGGCCGCAACCGGCGTGGAGGAATCATAG
Upstream 100 bases:
>100_bases GCGACACATTTTTGCGCTCACGGTCCGGCGGCTATGCCGCTGGCGGCACAGGTCCCAGGTCATAGAAAACCGGGGCGTTG TCATGAGTTCTGGAGCCGTC
Downstream 100 bases:
>100_bases CCATGTCCGCAGTCGCTCCCGCGCCCCATCGCGGGTACAAGGTCATCTATCGCCGCCTGCTCGTTACGCTGCTGCTTATG GCGCTCACGCCGCTGGTGGC
Product: pyruvate phosphate dikinase
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]
Number of amino acids: Translated: 869; Mature: 868
Protein sequence:
>869_residues MPLSRLLGFFSRTARRAAAGASASDSEAERFFALRHHSFKLFLTAWNTFQETMTALEYTLCCDHPFGLYRVRALCTSMAT QAFQCIKQLERLDPAPCEALYARFSELQKMVADDVYEPESCLLGPLVLPLGPDETDMGALSGEGRSPLVDPVTLRLEDVR RRLPGLIPRGFVVTAVGCQHFFQSGDLQSEINRRIQAAGGLAPKHLAKLSRSLGQLVEDTPMPQDLAAEILTAVARLRAS CPEGMRLVLRGRLWPPEAQGSDDPGLVLWGPSVPLEAMDEEVLHAVQLTLARKQRAQALVYRRARGLTEAGAGVCVTCMA VEDGSWGGLAHSCSPVKAHGDHAHVYACRGLPQELDYSVLPADHATVDRRPPYDVISLVGPPGTARPLLEADTAREVAAL ALDLEADFGWPVSLSWVRTPQGHLRLLLARPIPLPVDAVDMPPVTADVRSNLRLTGGYTVSPGRVAGPVCVARRWEEARR FPAGGILVVPDDNYRWGALMDRAAGIIAEEGLPGSRLASLAREFGKPAIFGLDNATEILKSGQRITLCSDICQVYVDRLE SLLPNVPPGRDYMPGSPVYRILQKASARILPLTMDVDSPEFRASNCQTYHDIARYCHERAVSAMFSLGAEKKYAPQRVKQ LRDKVLKQFWVVNLSDGFAVTPPGPVIDIEQISSVPMRALWHGMNAYAWQGPPPVDGKGFLSVLFEATANPNLDPAAQTA YFSEKNYFMISRDYCSLHSRFGFHFVSVEARLGERTPENYLTFHLRGGAANIERRILRVRFVAEILWEFGFAPMVRNDAV SATLKGMDREEGEFLLAVAGYMTIHTRQLDMIMQDAAQVAARREEMLEHCRMLFKGEKLPQAATGVEES
Sequences:
>Translated_869_residues MPLSRLLGFFSRTARRAAAGASASDSEAERFFALRHHSFKLFLTAWNTFQETMTALEYTLCCDHPFGLYRVRALCTSMAT QAFQCIKQLERLDPAPCEALYARFSELQKMVADDVYEPESCLLGPLVLPLGPDETDMGALSGEGRSPLVDPVTLRLEDVR RRLPGLIPRGFVVTAVGCQHFFQSGDLQSEINRRIQAAGGLAPKHLAKLSRSLGQLVEDTPMPQDLAAEILTAVARLRAS CPEGMRLVLRGRLWPPEAQGSDDPGLVLWGPSVPLEAMDEEVLHAVQLTLARKQRAQALVYRRARGLTEAGAGVCVTCMA VEDGSWGGLAHSCSPVKAHGDHAHVYACRGLPQELDYSVLPADHATVDRRPPYDVISLVGPPGTARPLLEADTAREVAAL ALDLEADFGWPVSLSWVRTPQGHLRLLLARPIPLPVDAVDMPPVTADVRSNLRLTGGYTVSPGRVAGPVCVARRWEEARR FPAGGILVVPDDNYRWGALMDRAAGIIAEEGLPGSRLASLAREFGKPAIFGLDNATEILKSGQRITLCSDICQVYVDRLE SLLPNVPPGRDYMPGSPVYRILQKASARILPLTMDVDSPEFRASNCQTYHDIARYCHERAVSAMFSLGAEKKYAPQRVKQ LRDKVLKQFWVVNLSDGFAVTPPGPVIDIEQISSVPMRALWHGMNAYAWQGPPPVDGKGFLSVLFEATANPNLDPAAQTA YFSEKNYFMISRDYCSLHSRFGFHFVSVEARLGERTPENYLTFHLRGGAANIERRILRVRFVAEILWEFGFAPMVRNDAV SATLKGMDREEGEFLLAVAGYMTIHTRQLDMIMQDAAQVAARREEMLEHCRMLFKGEKLPQAATGVEES >Mature_868_residues PLSRLLGFFSRTARRAAAGASASDSEAERFFALRHHSFKLFLTAWNTFQETMTALEYTLCCDHPFGLYRVRALCTSMATQ AFQCIKQLERLDPAPCEALYARFSELQKMVADDVYEPESCLLGPLVLPLGPDETDMGALSGEGRSPLVDPVTLRLEDVRR RLPGLIPRGFVVTAVGCQHFFQSGDLQSEINRRIQAAGGLAPKHLAKLSRSLGQLVEDTPMPQDLAAEILTAVARLRASC PEGMRLVLRGRLWPPEAQGSDDPGLVLWGPSVPLEAMDEEVLHAVQLTLARKQRAQALVYRRARGLTEAGAGVCVTCMAV EDGSWGGLAHSCSPVKAHGDHAHVYACRGLPQELDYSVLPADHATVDRRPPYDVISLVGPPGTARPLLEADTAREVAALA LDLEADFGWPVSLSWVRTPQGHLRLLLARPIPLPVDAVDMPPVTADVRSNLRLTGGYTVSPGRVAGPVCVARRWEEARRF PAGGILVVPDDNYRWGALMDRAAGIIAEEGLPGSRLASLAREFGKPAIFGLDNATEILKSGQRITLCSDICQVYVDRLES LLPNVPPGRDYMPGSPVYRILQKASARILPLTMDVDSPEFRASNCQTYHDIARYCHERAVSAMFSLGAEKKYAPQRVKQL RDKVLKQFWVVNLSDGFAVTPPGPVIDIEQISSVPMRALWHGMNAYAWQGPPPVDGKGFLSVLFEATANPNLDPAAQTAY FSEKNYFMISRDYCSLHSRFGFHFVSVEARLGERTPENYLTFHLRGGAANIERRILRVRFVAEILWEFGFAPMVRNDAVS ATLKGMDREEGEFLLAVAGYMTIHTRQLDMIMQDAAQVAARREEMLEHCRMLFKGEKLPQAATGVEES
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=476, Percent_Identity=23.5294117647059, Blast_Score=78, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR006319 - InterPro: IPR018274 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.2 [H]
Molecular weight: Translated: 95806; Mature: 95675
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSRLLGFFSRTARRAAAGASASDSEAERFFALRHHSFKLFLTAWNTFQETMTALEYTL CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHH CCDHPFGLYRVRALCTSMATQAFQCIKQLERLDPAPCEALYARFSELQKMVADDVYEPES CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHH CLLGPLVLPLGPDETDMGALSGEGRSPLVDPVTLRLEDVRRRLPGLIPRGFVVTAVGCQH HHHCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHEEHHHHHH FFQSGDLQSEINRRIQAAGGLAPKHLAKLSRSLGQLVEDTPMPQDLAAEILTAVARLRAS HHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC CPEGMRLVLRGRLWPPEAQGSDDPGLVLWGPSVPLEAMDEEVLHAVQLTLARKQRAQALV CCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH YRRARGLTEAGAGVCVTCMAVEDGSWGGLAHSCSPVKAHGDHAHVYACRGLPQELDYSVL HHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHCCCEEC PADHATVDRRPPYDVISLVGPPGTARPLLEADTAREVAALALDLEADFGWPVSLSWVRTP CCCCCCCCCCCCHHHHEEECCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCEEEEEEECC QGHLRLLLARPIPLPVDAVDMPPVTADVRSNLRLTGGYTVSPGRVAGPVCVARRWEEARR CHHEEEEEECCCCCCCCCCCCCCCCHHHHCCEEEECCEEECCCCCCCHHHHHHHHHHHHC FPAGGILVVPDDNYRWGALMDRAAGIIAEEGLPGSRLASLAREFGKPAIFGLDNATEILK CCCCCEEEECCCCCCHHHHHHHHHCHHCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHH SGQRITLCSDICQVYVDRLESLLPNVPPGRDYMPGSPVYRILQKASARILPLTMDVDSPE CCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCC FRASNCQTYHDIARYCHERAVSAMFSLGAEKKYAPQRVKQLRDKVLKQFWVVNLSDGFAV CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEECCCCEEE TPPGPVIDIEQISSVPMRALWHGMNAYAWQGPPPVDGKGFLSVLFEATANPNLDPAAQTA CCCCCEEEHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHH YFSEKNYFMISRDYCSLHSRFGFHFVSVEARLGERTPENYLTFHLRGGAANIERRILRVR EECCCCEEEEECHHHHHHHHCCEEEEEEEHHHCCCCCCCEEEEEEECCCHHHHHHHHHHH FVAEILWEFGFAPMVRNDAVSATLKGMDREEGEFLLAVAGYMTIHTRQLDMIMQDAAQVA HHHHHHHHHCCCCHHCCCHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH ARREEMLEHCRMLFKGEKLPQAATGVEES HHHHHHHHHHHHHHCCCCCCHHHCCCCCC >Mature Secondary Structure PLSRLLGFFSRTARRAAAGASASDSEAERFFALRHHSFKLFLTAWNTFQETMTALEYTL CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHH CCDHPFGLYRVRALCTSMATQAFQCIKQLERLDPAPCEALYARFSELQKMVADDVYEPES CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHH CLLGPLVLPLGPDETDMGALSGEGRSPLVDPVTLRLEDVRRRLPGLIPRGFVVTAVGCQH HHHCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHEEHHHHHH FFQSGDLQSEINRRIQAAGGLAPKHLAKLSRSLGQLVEDTPMPQDLAAEILTAVARLRAS HHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC CPEGMRLVLRGRLWPPEAQGSDDPGLVLWGPSVPLEAMDEEVLHAVQLTLARKQRAQALV CCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH YRRARGLTEAGAGVCVTCMAVEDGSWGGLAHSCSPVKAHGDHAHVYACRGLPQELDYSVL HHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHCCCEEC PADHATVDRRPPYDVISLVGPPGTARPLLEADTAREVAALALDLEADFGWPVSLSWVRTP CCCCCCCCCCCCHHHHEEECCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCEEEEEEECC QGHLRLLLARPIPLPVDAVDMPPVTADVRSNLRLTGGYTVSPGRVAGPVCVARRWEEARR CHHEEEEEECCCCCCCCCCCCCCCCHHHHCCEEEECCEEECCCCCCCHHHHHHHHHHHHC FPAGGILVVPDDNYRWGALMDRAAGIIAEEGLPGSRLASLAREFGKPAIFGLDNATEILK CCCCCEEEECCCCCCHHHHHHHHHCHHCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHH SGQRITLCSDICQVYVDRLESLLPNVPPGRDYMPGSPVYRILQKASARILPLTMDVDSPE CCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCC FRASNCQTYHDIARYCHERAVSAMFSLGAEKKYAPQRVKQLRDKVLKQFWVVNLSDGFAV CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEECCCCEEE TPPGPVIDIEQISSVPMRALWHGMNAYAWQGPPPVDGKGFLSVLFEATANPNLDPAAQTA CCCCCEEEHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHH YFSEKNYFMISRDYCSLHSRFGFHFVSVEARLGERTPENYLTFHLRGGAANIERRILRVR EECCCCEEEEECHHHHHHHHCCEEEEEEEHHHCCCCCCCEEEEEEECCCHHHHHHHHHHH FVAEILWEFGFAPMVRNDAVSATLKGMDREEGEFLLAVAGYMTIHTRQLDMIMQDAAQVA HHHHHHHHHCCCCHHCCCHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH ARREEMLEHCRMLFKGEKLPQAATGVEES HHHHHHHHHHHHHHCCCCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]