| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is gmk [H]
Identifier: 220904674
GI number: 220904674
Start: 1681356
End: 1681964
Strand: Direct
Name: gmk [H]
Synonym: Ddes_1406
Alternate gene names: 220904674
Gene position: 1681356-1681964 (Clockwise)
Preceding gene: 220904673
Following gene: 220904675
Centisome position: 58.51
GC content: 61.25
Gene sequence:
>609_bases ATGCCCCGACAAGGCATTGCCCTGGTCTTGAGCGCCCCCTCCGGGGCTGGAAAAACGACATTGGTTCAACGCCTGCTGCG GGCCTTCCCCCTGCTGGGCTACTCTGTTTCCTGCACCACGCGCCTGCCCCGGCAGGGCGAAGTGGACGGCAAGGACTATA TATTCATCAGCCGTGAAGAATTTGAACAGCGCCGCGCCGAAGGCTATTTTGCCGAATGGGCCGAAGTGCACGGCAATCTT TACGGCACGCCGCTGGCCCCGGTGAAGGAAAAACTGCGCCTTGGGCAGGACCTGCTTTTTGACATTGACGTGCAGGGCGC CGCCCAGCTCAAGCTTTCCTTGACCGAGGCGGTCTTTGTTTTCATACTGCCGCCCGGCATGACCGAGCTTGAACGCCGCC TGCGCAACCGGGGCCTGGATGATGAAAAAACCATTGAGCGCCGCCTGGCCAACGCCCGGCAGGAAATACTCGAAGCCCGC TGGTATGATGCGCTTGTGGTCAATGACAACCTGGACGTGGCCTATGACGAGCTGCGCTCGGTTTTTGTGGCGGCAAGCCT TGCCCCCGACCGCAACCCCGACCTGTCGGAAACAGTGCTGCGCGGCTGA
Upstream 100 bases:
>100_bases AAACGCGCTCCATTCTTGTGACGGATTCCAACCACGTCATTCTTTCATCCATACAACCTGAAACCATCAGCCAGCGCTTT GCGCAAGAGGAAGGAATCTG
Downstream 100 bases:
>100_bases GCCGCTGCCGTACGGCAGCCATACCAGTACAGCAGGTACCTTTACTTTATTGACGCCACGAACCGGATTAAATCATGAAA AGCGCAAATATCGCTCCACA
Product: Guanylate kinase
Products: NA
Alternate protein names: GMP kinase [H]
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MPRQGIALVLSAPSGAGKTTLVQRLLRAFPLLGYSVSCTTRLPRQGEVDGKDYIFISREEFEQRRAEGYFAEWAEVHGNL YGTPLAPVKEKLRLGQDLLFDIDVQGAAQLKLSLTEAVFVFILPPGMTELERRLRNRGLDDEKTIERRLANARQEILEAR WYDALVVNDNLDVAYDELRSVFVAASLAPDRNPDLSETVLRG
Sequences:
>Translated_202_residues MPRQGIALVLSAPSGAGKTTLVQRLLRAFPLLGYSVSCTTRLPRQGEVDGKDYIFISREEFEQRRAEGYFAEWAEVHGNL YGTPLAPVKEKLRLGQDLLFDIDVQGAAQLKLSLTEAVFVFILPPGMTELERRLRNRGLDDEKTIERRLANARQEILEAR WYDALVVNDNLDVAYDELRSVFVAASLAPDRNPDLSETVLRG >Mature_201_residues PRQGIALVLSAPSGAGKTTLVQRLLRAFPLLGYSVSCTTRLPRQGEVDGKDYIFISREEFEQRRAEGYFAEWAEVHGNLY GTPLAPVKEKLRLGQDLLFDIDVQGAAQLKLSLTEAVFVFILPPGMTELERRLRNRGLDDEKTIERRLANARQEILEARW YDALVVNDNLDVAYDELRSVFVAASLAPDRNPDLSETVLRG
Specific function: Essential for recycling GMP and indirectly, cGMP [H]
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain [H]
Homologues:
Organism=Homo sapiens, GI226874831, Length=176, Percent_Identity=40.9090909090909, Blast_Score=139, Evalue=1e-33, Organism=Homo sapiens, GI226874833, Length=176, Percent_Identity=40.9090909090909, Blast_Score=139, Evalue=1e-33, Organism=Homo sapiens, GI4504221, Length=176, Percent_Identity=40.9090909090909, Blast_Score=139, Evalue=1e-33, Organism=Homo sapiens, GI21361598, Length=204, Percent_Identity=29.9019607843137, Blast_Score=89, Evalue=2e-18, Organism=Homo sapiens, GI38570142, Length=174, Percent_Identity=32.183908045977, Blast_Score=86, Evalue=2e-17, Organism=Homo sapiens, GI111154074, Length=165, Percent_Identity=29.6969696969697, Blast_Score=77, Evalue=7e-15, Organism=Homo sapiens, GI262118259, Length=188, Percent_Identity=28.1914893617021, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI262118255, Length=188, Percent_Identity=28.1914893617021, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI4505237, Length=188, Percent_Identity=28.1914893617021, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI262118263, Length=188, Percent_Identity=28.1914893617021, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI52630447, Length=187, Percent_Identity=28.3422459893048, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI119943106, Length=170, Percent_Identity=27.6470588235294, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI21389483, Length=176, Percent_Identity=30.1136363636364, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI148539628, Length=172, Percent_Identity=30.8139534883721, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI148539578, Length=172, Percent_Identity=30.8139534883721, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI119943108, Length=160, Percent_Identity=28.125, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI261862237, Length=170, Percent_Identity=27.6470588235294, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI14780902, Length=197, Percent_Identity=26.9035532994924, Blast_Score=68, Evalue=4e-12, Organism=Homo sapiens, GI186700627, Length=191, Percent_Identity=24.0837696335079, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI186700629, Length=191, Percent_Identity=24.0837696335079, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI186972120, Length=191, Percent_Identity=24.0837696335079, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI218156340, Length=173, Percent_Identity=30.635838150289, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI218156270, Length=177, Percent_Identity=30.5084745762712, Blast_Score=65, Evalue=3e-11, Organism=Homo sapiens, GI218156338, Length=172, Percent_Identity=30.8139534883721, Blast_Score=64, Evalue=9e-11, Organism=Escherichia coli, GI1790080, Length=191, Percent_Identity=44.5026178010471, Blast_Score=161, Evalue=3e-41, Organism=Caenorhabditis elegans, GI193203132, Length=176, Percent_Identity=37.5, Blast_Score=123, Evalue=5e-29, Organism=Caenorhabditis elegans, GI17508835, Length=176, Percent_Identity=37.5, Blast_Score=123, Evalue=7e-29, Organism=Caenorhabditis elegans, GI17557440, Length=186, Percent_Identity=23.6559139784946, Blast_Score=68, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6320662, Length=181, Percent_Identity=43.0939226519337, Blast_Score=156, Evalue=3e-39, Organism=Drosophila melanogaster, GI21356141, Length=180, Percent_Identity=42.2222222222222, Blast_Score=136, Evalue=9e-33, Organism=Drosophila melanogaster, GI45554489, Length=175, Percent_Identity=30.8571428571429, Blast_Score=81, Evalue=4e-16, Organism=Drosophila melanogaster, GI45554481, Length=175, Percent_Identity=30.8571428571429, Blast_Score=81, Evalue=4e-16, Organism=Drosophila melanogaster, GI24640542, Length=175, Percent_Identity=30.8571428571429, Blast_Score=81, Evalue=4e-16, Organism=Drosophila melanogaster, GI116007136, Length=175, Percent_Identity=30.8571428571429, Blast_Score=81, Evalue=4e-16, Organism=Drosophila melanogaster, GI85724806, Length=175, Percent_Identity=30.8571428571429, Blast_Score=81, Evalue=4e-16, Organism=Drosophila melanogaster, GI161077626, Length=175, Percent_Identity=30.8571428571429, Blast_Score=81, Evalue=5e-16, Organism=Drosophila melanogaster, GI161077752, Length=167, Percent_Identity=31.1377245508982, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI45554804, Length=167, Percent_Identity=31.1377245508982, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI161077754, Length=167, Percent_Identity=31.1377245508982, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI45554813, Length=167, Percent_Identity=31.1377245508982, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI45554791, Length=167, Percent_Identity=31.1377245508982, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI221330166, Length=192, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI221330162, Length=192, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI221330164, Length=192, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI85816281, Length=206, Percent_Identity=27.6699029126214, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI45551002, Length=206, Percent_Identity=27.6699029126214, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI85816106, Length=206, Percent_Identity=27.6699029126214, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI281360700, Length=177, Percent_Identity=30.5084745762712, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI24641280, Length=177, Percent_Identity=30.5084745762712, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI24641282, Length=177, Percent_Identity=30.5084745762712, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI45554818, Length=177, Percent_Identity=30.5084745762712, Blast_Score=67, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 [H]
Pfam domain/function: PF00625 Guanylate_kin [H]
EC number: =2.7.4.8 [H]
Molecular weight: Translated: 22718; Mature: 22587
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS00856 GUANYLATE_KINASE_1 ; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRQGIALVLSAPSGAGKTTLVQRLLRAFPLLGYSVSCTTRLPRQGEVDGKDYIFISREE CCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEEEEHHH FEQRRAEGYFAEWAEVHGNLYGTPLAPVKEKLRLGQDLLFDIDVQGAAQLKLSLTEAVFV HHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCHHEEEEHHHEEEE FILPPGMTELERRLRNRGLDDEKTIERRLANARQEILEARWYDALVVNDNLDVAYDELRS EEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHH VFVAASLAPDRNPDLSETVLRG HHHHHHCCCCCCCCHHHHHHCC >Mature Secondary Structure PRQGIALVLSAPSGAGKTTLVQRLLRAFPLLGYSVSCTTRLPRQGEVDGKDYIFISREE CCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEEEEHHH FEQRRAEGYFAEWAEVHGNLYGTPLAPVKEKLRLGQDLLFDIDVQGAAQLKLSLTEAVFV HHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCHHEEEEHHHEEEE FILPPGMTELERRLRNRGLDDEKTIERRLANARQEILEARWYDALVVNDNLDVAYDELRS EEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHH VFVAASLAPDRNPDLSETVLRG HHHHHHCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA