| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is eutM [C]
Identifier: 220904623
GI number: 220904623
Start: 1629270
End: 1629866
Strand: Direct
Name: eutM [C]
Synonym: Ddes_1355
Alternate gene names: 220904623
Gene position: 1629270-1629866 (Clockwise)
Preceding gene: 220904595
Following gene: 220904624
Centisome position: 56.7
GC content: 58.12
Gene sequence:
>597_bases ATGCTGTATGCAGGTGAGGAGGCCCTCGGCCTCATTGAAACGCTGGGGATGGTGCCTGCCATTTATGGGGCGGACAACAT GCTCAAAGCCGCAGATGTAGAACTGATCGCTTACGAAAACGTAGGTTCTACTCTTGTAACCATTATGGTAAAGGGCGATG TGGCAGCCGTGCAGGCCTCTGTGGCCGCCGGGGCCGCAGCTGCAGCCACCATAGGCAAGCTCACGGCGCAAAATGTCATG CCGCGCCCGGTTCGCGGGGTTGGCGGCATCGCCATGGCCCACGTTGTGGACTCCATACCCGAGGGTGACCCCGGCCTACG TTCGCTGGGCATGATTGAAACCTTCGGGATCGTCTATCTTATGGAAGCGGCTGACGCCATGATAAAGACGGCCGATGTGG AGCTTATCGGCTATGAAAACGTGGCTTCTGGCTACTGTTCCGCCCTTGTTCAGGGCGACGTGGCGGCCTGCAAATCCGCA GTGGAGGCGGGCGTCAAGGCCGTAAAAAATATGGGTACAGACGTCTACAGTTCTTGCGTCATCCCCACCCCTCACCGGCA TCTTGTAAAACTTGTACGGCGGTACACCCTGGCCTAG
Upstream 100 bases:
>100_bases TGACCTTGCCCCATAGGGGAAAGGTTACAAAGAAGATAAGAATCATTTTCACCGCCGCCAAGGTGGCTTGCGGCACAAAT ACGAAGCTCATGGAGCGTGT
Downstream 100 bases:
>100_bases CCGGGCACAGACCACGGAGCAGCATCATGATCGGCGACAAGGACCTCATTTCTATACAGCAGGCGCGCATTCTGGCCGAA AATGCCATTGAAGCCGGCAA
Product: microcompartments protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MLYAGEEALGLIETLGMVPAIYGADNMLKAADVELIAYENVGSTLVTIMVKGDVAAVQASVAAGAAAAATIGKLTAQNVM PRPVRGVGGIAMAHVVDSIPEGDPGLRSLGMIETFGIVYLMEAADAMIKTADVELIGYENVASGYCSALVQGDVAACKSA VEAGVKAVKNMGTDVYSSCVIPTPHRHLVKLVRRYTLA
Sequences:
>Translated_198_residues MLYAGEEALGLIETLGMVPAIYGADNMLKAADVELIAYENVGSTLVTIMVKGDVAAVQASVAAGAAAAATIGKLTAQNVM PRPVRGVGGIAMAHVVDSIPEGDPGLRSLGMIETFGIVYLMEAADAMIKTADVELIGYENVASGYCSALVQGDVAACKSA VEAGVKAVKNMGTDVYSSCVIPTPHRHLVKLVRRYTLA >Mature_198_residues MLYAGEEALGLIETLGMVPAIYGADNMLKAADVELIAYENVGSTLVTIMVKGDVAAVQASVAAGAAAAATIGKLTAQNVM PRPVRGVGGIAMAHVVDSIPEGDPGLRSLGMIETFGIVYLMEAADAMIKTADVELIGYENVASGYCSALVQGDVAACKSA VEAGVKAVKNMGTDVYSSCVIPTPHRHLVKLVRRYTLA
Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]
COG id: COG4577
COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial microcompartments protein family [H]
Homologues:
Organism=Escherichia coli, GI87082108, Length=83, Percent_Identity=50.6024096385542, Blast_Score=76, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020808 - InterPro: IPR000249 [H]
Pfam domain/function: PF00936 BMC [H]
EC number: NA
Molecular weight: Translated: 20414; Mature: 20414
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYAGEEALGLIETLGMVPAIYGADNMLKAADVELIAYENVGSTLVTIMVKGDVAAVQAS CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCEEEEEECCCCCEEEEEEECCCHHHHHHH VAAGAAAAATIGKLTAQNVMPRPVRGVGGIAMAHVVDSIPEGDPGLRSLGMIETFGIVYL HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH MEAADAMIKTADVELIGYENVASGYCSALVQGDVAACKSAVEAGVKAVKNMGTDVYSSCV HHHHHHHHHHCCEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHCCC IPTPHRHLVKLVRRYTLA CCCCHHHHHHHHHHHHCC >Mature Secondary Structure MLYAGEEALGLIETLGMVPAIYGADNMLKAADVELIAYENVGSTLVTIMVKGDVAAVQAS CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCEEEEEECCCCCEEEEEEECCCHHHHHHH VAAGAAAAATIGKLTAQNVMPRPVRGVGGIAMAHVVDSIPEGDPGLRSLGMIETFGIVYL HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH MEAADAMIKTADVELIGYENVASGYCSALVQGDVAACKSAVEAGVKAVKNMGTDVYSSCV HHHHHHHHHHCCEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHCCC IPTPHRHLVKLVRRYTLA CCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]