| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is adhE [H]
Identifier: 220904624
GI number: 220904624
Start: 1629893
End: 1631371
Strand: Direct
Name: adhE [H]
Synonym: Ddes_1356
Alternate gene names: 220904624
Gene position: 1629893-1631371 (Clockwise)
Preceding gene: 220904623
Following gene: 220904625
Centisome position: 56.72
GC content: 59.97
Gene sequence:
>1479_bases ATGATCGGCGACAAGGACCTCATTTCTATACAGCAGGCGCGCATTCTGGCCGAAAATGCCATTGAAGCCGGCAAAAAACT GGCCGCCCTGCCACAAGAGAATCTGGATAGCATTGTTGAAGCCATGGCAGACGCTGTGGAAACGCATGCGCAGTCCCTTG CCGTCATGTGTCATGAAGAAAGCGACTGTGGCCGCTGGCAGGACAAAATGGCCAAAAACCTTTTTGTCTGTCGCCGGGTC CGGCAGAGCCTGCGCGGCATGCGCTGCGTCGGCTATCTTGGCGGGCAGGAGCAGGAAGGCGTTTATGACGTTGGTGTGCC CCTGGGCGTCATTGTAGCCCTCTGCCCGGTGACCAGTCCTGTATCTACCGCCATCTATAACGTTCTGCTGGCCATCAAGT CCGGCAATGCCATAATTTTTTCCCTCCACCCCCGTGCTGTGGACAGCATGCGCCACGCCCTGGATATCATGATTGCCGCC GGTCAGGCCCACGGCCTGCCCGAAGGGGCCATATCCTACCTGGACATTGTGGCAAAAAGCGGCACGGAAGAACTCATGCG CCACCCCGGCGTGGCCCTGGTCATGGTTACGGGCGTGCTCGGCATGTTCGAGGCTGCCCGCACCAGCGGCAAGCCCCTCA TCTATGGCGGCACAGGTAACGGCCCGGTTTTCATCGAGCGCAGCGCCGACATTCCCGCCGCCGTGGAGCATATTATCGCC AGCAAAACCTTTGATAACGGGCTGGCGCCTTCAGCCGAGCAGTGCGTCATCGTGGATGGCTGTGTTGAGCGGCAGACCCG CCGGGCCTTTCAGGACAAAGGCGCATATTTCATGAGCGAGGCCGAGGCGCAGGCCCTGTCACGGGTACTCTTTCATGAAG ACGGACGCCGTCACCGCCACATGGTGGGCCAGTCTGCCGAGGCCCTTGCAACCAAGGCCGGCTTTTCCATTCCTGCCGAT ACAAAAGTGCTCATGGCTGAACGCAAGTACGTTACAGGCGAGGATCCCTATGTCAGGGAACTGCTCTCGCCCGTCCTCGG TTATTACGTGGAACCTGACTGGATGCACGCCTGCGAAAAGTGCGTGGAACTGCTGCTTCAGGAGCGGCATGCGCAAACTC TGGCTATCCATAGCCGGGATGAAGAAGTCATCCGCCAGTTTGCCCTCAAAAAACCCGTGGCGCGCCTGCTGGTCAACACC GGCGCTGCTTTTGGCGGCATGGGGCTGACAACCAACCTTACCCCCGCCATGACGCAGGGCAGTGGCATTGCGGGCTACGG CATCACATCAGACAATATTTCGCCCATGAATCTCATTTATCGCAGAAAGATAGGCTATGGCGTGCGTGATCTCGCCCAGC TGGCGGATTTCACCGCACCGTCCGCCCCCGGCGGGGGCGCGACCGGCAACGAGCAGAACTTTGACCTGCTCAGACGCGTA CTGCGCGAGGCTCTGGGCGCTCTGCCCCAGGCTCGCTGA
Upstream 100 bases:
>100_bases TCTACAGTTCTTGCGTCATCCCCACCCCTCACCGGCATCTTGTAAAACTTGTACGGCGGTACACCCTGGCCTAGCCGGGC ACAGACCACGGAGCAGCATC
Downstream 100 bases:
>100_bases CCCCGGGGCACACACCAAGCCCGCAGGCCCTTCTGACCGCAGAATACGGAGGATAGAACGTGGATCTTCATGATTTTTCG AGCAAAATAGCGGAAGTTAC
Product: aldehyde-alcohol dehydrogenase 2
Products: NA
Alternate protein names: Alcohol dehydrogenase; ADH; Acetaldehyde dehydrogenase [acetylating]; ACDH; Pyruvate-formate-lyase deactivase; PFL deactivase [H]
Number of amino acids: Translated: 492; Mature: 492
Protein sequence:
>492_residues MIGDKDLISIQQARILAENAIEAGKKLAALPQENLDSIVEAMADAVETHAQSLAVMCHEESDCGRWQDKMAKNLFVCRRV RQSLRGMRCVGYLGGQEQEGVYDVGVPLGVIVALCPVTSPVSTAIYNVLLAIKSGNAIIFSLHPRAVDSMRHALDIMIAA GQAHGLPEGAISYLDIVAKSGTEELMRHPGVALVMVTGVLGMFEAARTSGKPLIYGGTGNGPVFIERSADIPAAVEHIIA SKTFDNGLAPSAEQCVIVDGCVERQTRRAFQDKGAYFMSEAEAQALSRVLFHEDGRRHRHMVGQSAEALATKAGFSIPAD TKVLMAERKYVTGEDPYVRELLSPVLGYYVEPDWMHACEKCVELLLQERHAQTLAIHSRDEEVIRQFALKKPVARLLVNT GAAFGGMGLTTNLTPAMTQGSGIAGYGITSDNISPMNLIYRRKIGYGVRDLAQLADFTAPSAPGGGATGNEQNFDLLRRV LREALGALPQAR
Sequences:
>Translated_492_residues MIGDKDLISIQQARILAENAIEAGKKLAALPQENLDSIVEAMADAVETHAQSLAVMCHEESDCGRWQDKMAKNLFVCRRV RQSLRGMRCVGYLGGQEQEGVYDVGVPLGVIVALCPVTSPVSTAIYNVLLAIKSGNAIIFSLHPRAVDSMRHALDIMIAA GQAHGLPEGAISYLDIVAKSGTEELMRHPGVALVMVTGVLGMFEAARTSGKPLIYGGTGNGPVFIERSADIPAAVEHIIA SKTFDNGLAPSAEQCVIVDGCVERQTRRAFQDKGAYFMSEAEAQALSRVLFHEDGRRHRHMVGQSAEALATKAGFSIPAD TKVLMAERKYVTGEDPYVRELLSPVLGYYVEPDWMHACEKCVELLLQERHAQTLAIHSRDEEVIRQFALKKPVARLLVNT GAAFGGMGLTTNLTPAMTQGSGIAGYGITSDNISPMNLIYRRKIGYGVRDLAQLADFTAPSAPGGGATGNEQNFDLLRRV LREALGALPQAR >Mature_492_residues MIGDKDLISIQQARILAENAIEAGKKLAALPQENLDSIVEAMADAVETHAQSLAVMCHEESDCGRWQDKMAKNLFVCRRV RQSLRGMRCVGYLGGQEQEGVYDVGVPLGVIVALCPVTSPVSTAIYNVLLAIKSGNAIIFSLHPRAVDSMRHALDIMIAA GQAHGLPEGAISYLDIVAKSGTEELMRHPGVALVMVTGVLGMFEAARTSGKPLIYGGTGNGPVFIERSADIPAAVEHIIA SKTFDNGLAPSAEQCVIVDGCVERQTRRAFQDKGAYFMSEAEAQALSRVLFHEDGRRHRHMVGQSAEALATKAGFSIPAD TKVLMAERKYVTGEDPYVRELLSPVLGYYVEPDWMHACEKCVELLLQERHAQTLAIHSRDEEVIRQFALKKPVARLLVNT GAAFGGMGLTTNLTPAMTQGSGIAGYGITSDNISPMNLIYRRKIGYGVRDLAQLADFTAPSAPGGGATGNEQNFDLLRRV LREALGALPQAR
Specific function: This enzyme has three activities:ADH, ACDH, and PFL- deactivase. In aerobic conditions it acts as a hydrogen peroxide scavenger. The PFL deactivase activity catalyzes the quenching of the pyruvate-formate-lyase catalyst in an iron, NAD, and CoA dependent
COG id: COG1012
COG function: function code C; NAD-dependent aldehyde dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the iron- containing alcohol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1787493, Length=443, Percent_Identity=35.4401805869075, Blast_Score=248, Evalue=8e-67, Organism=Escherichia coli, GI1788797, Length=380, Percent_Identity=30.7894736842105, Blast_Score=149, Evalue=4e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 - InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 - InterPro: IPR012079 [H]
Pfam domain/function: PF00171 Aldedh; PF00465 Fe-ADH [H]
EC number: =1.1.1.1; =1.2.1.10 [H]
Molecular weight: Translated: 53067; Mature: 53067
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGDKDLISIQQARILAENAIEAGKKLAALPQENLDSIVEAMADAVETHAQSLAVMCHEE CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SDCGRWQDKMAKNLFVCRRVRQSLRGMRCVGYLGGQEQEGVYDVGVPLGVIVALCPVTSP CCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCEEECCCHHHHHHHHHCCCCH VSTAIYNVLLAIKSGNAIIFSLHPRAVDSMRHALDIMIAAGQAHGLPEGAISYLDIVAKS HHHHHHHHHHEEECCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC GTEELMRHPGVALVMVTGVLGMFEAARTSGKPLIYGGTGNGPVFIERSADIPAAVEHIIA CHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCHHHHHHHHH SKTFDNGLAPSAEQCVIVDGCVERQTRRAFQDKGAYFMSEAEAQALSRVLFHEDGRRHRH HHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHH MVGQSAEALATKAGFSIPADTKVLMAERKYVTGEDPYVRELLSPVLGYYVEPDWMHACEK HHCCCHHHHHHHCCCCCCCCCHHEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH CVELLLQERHAQTLAIHSRDEEVIRQFALKKPVARLLVNTGAAFGGMGLTTNLTPAMTQG HHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC SGIAGYGITSDNISPMNLIYRRKIGYGVRDLAQLADFTAPSAPGGGATGNEQNFDLLRRV CCCEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH LREALGALPQAR HHHHHHCCCCCC >Mature Secondary Structure MIGDKDLISIQQARILAENAIEAGKKLAALPQENLDSIVEAMADAVETHAQSLAVMCHEE CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SDCGRWQDKMAKNLFVCRRVRQSLRGMRCVGYLGGQEQEGVYDVGVPLGVIVALCPVTSP CCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCEEECCCHHHHHHHHHCCCCH VSTAIYNVLLAIKSGNAIIFSLHPRAVDSMRHALDIMIAAGQAHGLPEGAISYLDIVAKS HHHHHHHHHHEEECCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC GTEELMRHPGVALVMVTGVLGMFEAARTSGKPLIYGGTGNGPVFIERSADIPAAVEHIIA CHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCHHHHHHHHH SKTFDNGLAPSAEQCVIVDGCVERQTRRAFQDKGAYFMSEAEAQALSRVLFHEDGRRHRH HHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHH MVGQSAEALATKAGFSIPADTKVLMAERKYVTGEDPYVRELLSPVLGYYVEPDWMHACEK HHCCCHHHHHHHCCCCCCCCCHHEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH CVELLLQERHAQTLAIHSRDEEVIRQFALKKPVARLLVNTGAAFGGMGLTTNLTPAMTQG HHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC SGIAGYGITSDNISPMNLIYRRKIGYGVRDLAQLADFTAPSAPGGGATGNEQNFDLLRRV CCCEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH LREALGALPQAR HHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]