Click here to switch to the map view.

The map label for this gene is 220904618

Identifier: 220904618

GI number: 220904618

Start: 1623286

End: 1624698

Strand: Reverse

Name: 220904618

Synonym: Ddes_1350

Alternate gene names: NA

Gene position: 1624698-1623286 (Counterclockwise)

Preceding gene: 220904619

Following gene: 220904617

Centisome position: 56.54

GC content: 58.67

Gene sequence:

>1413_bases
ATGGTGAGTCAGGAACAGTGGAACAGGGATTTGCAGGCTGCCCTGGAGCCTCTGGCTCAGGGGTGCCCTGAAGACAGCCT
TGCGCGGCTGCGTACGCTGTTACGCACATGTGACAATACCCCGTTGTGCCGCGCCACGACCCTTGAGGCCACGGCCCGTG
TGCTGCTGGCTATGAGCCGGGGGGCCGAGGCTGTGTCTGTTATGGAAGAAGGTCTCGCTCTCTTGCGCAATGCCTATGGT
TCATCTTCTCCCTTAACTTTGAACCTGATGCAGAATCTGGCCCATCTCTGGCTGGAAACGGGAAGCTACAGCAAGAGCGA
AGAGCTGGGACTGGAAGCAGCTGCCGCTTGTGAGTCGGCCTTTGGCGCGCATTCTCCCCGTTTGGCCAGCGCGTTGCTTC
ACCTTTCTGCAGTGTATTACCGCCGAAAAGAGTGGGACCGGGCGGAACAGTGCCTGCAACGTGCCAGAGGCATATGGGAA
GGGCATGCCCGCACGTCCGGGACGCTGCCGGACCAGCAACTGGGAACCTGCCTGAACAATCTGGGGCGCCTGTATGAAGA
GCGCGGCCTGCTCGCTGCGGGCATAGACTGGCATCGCCAGGCCGTTGCCCTGCGTCGGAAGGTCTGCGGCGAGCACGAGG
ACACTGCCTTTTCACTGGGTAATCTGGGCGTGGCGCTGGCTTCTGATGGGCAGTGGATCGAGGCCGCCCGTACCCTTGAA
GAGGCGGTAGCCTGTTATGAAAAACTGGGTAAAGGCCGCAGCGCTGAAGCGGAAAGCTATAAAAAAAATCTTGAGCTGTG
CCGCAGGGCCTCGGCAGAGCAGGGGACGCAACCGGTTTCGGGGTCGCAATCTCTTGGGCAGGATGCGCGCGAAGCGCTGT
TGGCGGAAATTATCGAGCGGGAGCTTGTCATGTTTCTGGCAACACCTAATGAAGGCGGAACAGCCATCTGCCAGCAGCGG
CCAGACAGTTTCAGGGTCATGAGGCGTATGGCCCATGAACCACTGAACACCGACACGCTTGCCTCGTATCTTGATGATCT
GCGCAATGCCGAACTGGCGGGGCGCAACTTCATGATTGAAAAATACGCCCGCATGGATGACCGGCTGCCTCCTTTAAGTG
TAAGCCCCTTGCTGGATGAAATTGCGGATGCGGAAGAAATTTTTATGCGTGACGCTTCTGCAAAATATCCCAATGTGATC
GTGCCTGACAACCGGGGGGCTTTTAAAAAATACCTCCGCTGCGAACTTGAAACCCTTTCGCCAGGCACACTTGCCCTGTA
TGCCCGGGATCTGCGGCATGCCCGGCAGACAGGACGCAATACGGCCCTGGAGCGTTACGCCTGCCTGGCCCGCCTCATGG
GCAAGTCCAGCCTTGAAGAACTTGAGGCTTCGGTTCGGGTTGCCGCTGTTTAG

Upstream 100 bases:

>100_bases
ACGGGTAACTGGCTTTGGGCGCATGGCCCGCAGATCATGCGCCATGTGCGGGAACCTCAGTTGCGTCATATGGACATGCT
GCAAGGCTGAAGGAGAGAGT

Downstream 100 bases:

>100_bases
AATTCTTCAACACTTGGTTCTGTTTTTTCAGGATGGGCAAGGCGACTCCCTTGGGTGCAACCCGGCTGGCAAAAAGCCGT
GCCGCACCGCAATGGGCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; NB-ARC Domain-Containing Protein; Tetratricopeptide Repeat-Containing Protein

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MVSQEQWNRDLQAALEPLAQGCPEDSLARLRTLLRTCDNTPLCRATTLEATARVLLAMSRGAEAVSVMEEGLALLRNAYG
SSSPLTLNLMQNLAHLWLETGSYSKSEELGLEAAAACESAFGAHSPRLASALLHLSAVYYRRKEWDRAEQCLQRARGIWE
GHARTSGTLPDQQLGTCLNNLGRLYEERGLLAAGIDWHRQAVALRRKVCGEHEDTAFSLGNLGVALASDGQWIEAARTLE
EAVACYEKLGKGRSAEAESYKKNLELCRRASAEQGTQPVSGSQSLGQDAREALLAEIIERELVMFLATPNEGGTAICQQR
PDSFRVMRRMAHEPLNTDTLASYLDDLRNAELAGRNFMIEKYARMDDRLPPLSVSPLLDEIADAEEIFMRDASAKYPNVI
VPDNRGAFKKYLRCELETLSPGTLALYARDLRHARQTGRNTALERYACLARLMGKSSLEELEASVRVAAV

Sequences:

>Translated_470_residues
MVSQEQWNRDLQAALEPLAQGCPEDSLARLRTLLRTCDNTPLCRATTLEATARVLLAMSRGAEAVSVMEEGLALLRNAYG
SSSPLTLNLMQNLAHLWLETGSYSKSEELGLEAAAACESAFGAHSPRLASALLHLSAVYYRRKEWDRAEQCLQRARGIWE
GHARTSGTLPDQQLGTCLNNLGRLYEERGLLAAGIDWHRQAVALRRKVCGEHEDTAFSLGNLGVALASDGQWIEAARTLE
EAVACYEKLGKGRSAEAESYKKNLELCRRASAEQGTQPVSGSQSLGQDAREALLAEIIERELVMFLATPNEGGTAICQQR
PDSFRVMRRMAHEPLNTDTLASYLDDLRNAELAGRNFMIEKYARMDDRLPPLSVSPLLDEIADAEEIFMRDASAKYPNVI
VPDNRGAFKKYLRCELETLSPGTLALYARDLRHARQTGRNTALERYACLARLMGKSSLEELEASVRVAAV
>Mature_470_residues
MVSQEQWNRDLQAALEPLAQGCPEDSLARLRTLLRTCDNTPLCRATTLEATARVLLAMSRGAEAVSVMEEGLALLRNAYG
SSSPLTLNLMQNLAHLWLETGSYSKSEELGLEAAAACESAFGAHSPRLASALLHLSAVYYRRKEWDRAEQCLQRARGIWE
GHARTSGTLPDQQLGTCLNNLGRLYEERGLLAAGIDWHRQAVALRRKVCGEHEDTAFSLGNLGVALASDGQWIEAARTLE
EAVACYEKLGKGRSAEAESYKKNLELCRRASAEQGTQPVSGSQSLGQDAREALLAEIIERELVMFLATPNEGGTAICQQR
PDSFRVMRRMAHEPLNTDTLASYLDDLRNAELAGRNFMIEKYARMDDRLPPLSVSPLLDEIADAEEIFMRDASAKYPNVI
VPDNRGAFKKYLRCELETLSPGTLALYARDLRHARQTGRNTALERYACLARLMGKSSLEELEASVRVAAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51913; Mature: 51913

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSQEQWNRDLQAALEPLAQGCPEDSLARLRTLLRTCDNTPLCRATTLEATARVLLAMSR
CCCHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHC
GAEAVSVMEEGLALLRNAYGSSSPLTLNLMQNLAHLWLETGSYSKSEELGLEAAAACESA
CHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHH
FGAHSPRLASALLHLSAVYYRRKEWDRAEQCLQRARGIWEGHARTSGTLPDQQLGTCLNN
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
LGRLYEERGLLAAGIDWHRQAVALRRKVCGEHEDTAFSLGNLGVALASDGQWIEAARTLE
HHHHHHHCCCEEECCHHHHHHHHHHHHHCCCCCCCCEECCCCCEEECCCCHHHHHHHHHH
EAVACYEKLGKGRSAEAESYKKNLELCRRASAEQGTQPVSGSQSLGQDAREALLAEIIER
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
ELVMFLATPNEGGTAICQQRPDSFRVMRRMAHEPLNTDTLASYLDDLRNAELAGRNFMIE
HHEEEEECCCCCCCHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHCCCHHHHH
KYARMDDRLPPLSVSPLLDEIADAEEIFMRDASAKYPNVIVPDNRGAFKKYLRCELETLS
HHHHHHCCCCCCCHHHHHHHHHCHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHCCC
PGTLALYARDLRHARQTGRNTALERYACLARLMGKSSLEELEASVRVAAV
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVSQEQWNRDLQAALEPLAQGCPEDSLARLRTLLRTCDNTPLCRATTLEATARVLLAMSR
CCCHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHC
GAEAVSVMEEGLALLRNAYGSSSPLTLNLMQNLAHLWLETGSYSKSEELGLEAAAACESA
CHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHH
FGAHSPRLASALLHLSAVYYRRKEWDRAEQCLQRARGIWEGHARTSGTLPDQQLGTCLNN
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
LGRLYEERGLLAAGIDWHRQAVALRRKVCGEHEDTAFSLGNLGVALASDGQWIEAARTLE
HHHHHHHCCCEEECCHHHHHHHHHHHHHCCCCCCCCEECCCCCEEECCCCHHHHHHHHHH
EAVACYEKLGKGRSAEAESYKKNLELCRRASAEQGTQPVSGSQSLGQDAREALLAEIIER
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
ELVMFLATPNEGGTAICQQRPDSFRVMRRMAHEPLNTDTLASYLDDLRNAELAGRNFMIE
HHEEEEECCCCCCCHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHCCCHHHHH
KYARMDDRLPPLSVSPLLDEIADAEEIFMRDASAKYPNVIVPDNRGAFKKYLRCELETLS
HHHHHHCCCCCCCHHHHHHHHHCHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHCCC
PGTLALYARDLRHARQTGRNTALERYACLARLMGKSSLEELEASVRVAAV
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA