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The map label for this gene is yfbS [H]

Identifier: 220904617

GI number: 220904617

Start: 1620760

End: 1622589

Strand: Reverse

Name: yfbS [H]

Synonym: Ddes_1349

Alternate gene names: 220904617

Gene position: 1622589-1620760 (Counterclockwise)

Preceding gene: 220904618

Following gene: 220904616

Centisome position: 56.47

GC content: 53.11

Gene sequence:

>1830_bases
ATGCTCACTTATGATATGACTGTCACCCTTGCAGTGCTTGGTGTGGCTGTTATTTTTCTTGTAACTAACGCGCTGCGCAA
TGATGTGGTTGCCGTTCTTATTATACTGGCTCTGACGCTCAGCGGCGTATTGCCCGTGCAGGAGGCCATATCCGGATTTG
CCAGCACCACGGTGCTTATTATCAGCTGTATGTTTATAGTGGGTAAGGCCATTATTCATACGGGCATTGCCCAGCGGGTG
GGCGAGATGATCATTCGCCGCGGGGGCAGAAGTGAGCGCAGGCTGCTGCTCATGATTATGGGGGCAGCCGCCTCTGTAGG
AGCGTTCATGAGTTCCACTGCTACGGCTGCCATATTTATTCCCATTACTCTTTCTGTGGCGGAAAAAACCCGTATCAACC
CCAGGCGGCTGCTCATGCCGCTGGCTCTCGCCGCGCTTATCAGCGGCATGATGACTCTGGTGGCGACTACGCCCAACATT
ATTGTCAATGGCATCTTGCGCGAACGGGGCCTTGAAACTTTGGGTTTTTTCAGTTTTACGCCCTTTGGCATACTCATATT
GCTGCTGGCGATGGCTTTTATGCTGCTTTGCGGGCAAGACATGCTGGCCCCCAAAGATTCGCGGATAGAACGCAAAAAAA
GCCTTTCCATCGATGATCTGCTGCGCCATCACAAGATCGACAAACAGCAGTTTTTGTTGCGTATTCCTGAAGGTTCAGAT
CTTGTGGACCGCACTGTGGCGCGCATGCAGCTCAGCGCCCGGTATGGAATCACCCTGCTGGCAGTGGAAGGTGACGGCAA
TGGCAGAAGGCGAACCATTACACCGGCAAAACCCGAAAAAGTGCTCCAGGCCGGGGACCTTCTCATGGTTATAGGTTCGT
CCAATCAGCTGCATACCTTTATAGAAACGTTTTCGCTGGAGCAGGTTTCTGCTACTGCCTCCAAGCGGAGAAATTTTTTT
CAGGTGGTAGGCCTTGCAGAAGTGATGCTCAATCCGGAGTCAACGCTTATCGGAAAGTCGCTGAAAGAAACTCTTTTTCA
AAGCACTTTTCAGAGCATGGTGCTCGGTATACGCCGCAAGGGAGAAACGCTGACGGAAGATGTGGCCGATATTCCTCTCA
AGTTCGGCGACGTTCTGCTGGTCTGCGGCGCGTGGGAAGATATCCTGCGGCTTGAGCGCAATAAAAGCCAGTATCTTCTG
CTTACATTGCCCCAGGACTATAAAGAAGTGATTCCCGCGAGGCAGAAGGGAAAAATTACACTGATCATTATGGCTGCTAT
GGTGGTCCTCATGGCTTTCAGCCTGCTGCCGCCGGTAACGGCCATTCTCGCCGCCACTGCCGCCCTGGTGCTCATGCGTT
GTGTGCCACTGAACTCTATTTATGAGGTGATAGACTGGCAGACCGTTGTCATGATCGCCGGAATTTTGCCGCTGGTGCTT
GCGCTCCAGAAGTCGGGGATTATTTCTCTGGTTTCCGACGGTTTCATTCAGCTTTTATCCGGGGCGGGCCCCTTTGCTGT
GCTGGCCGGGTTGTTTATGATTACGGCCCTGCTGGGGTTTTGCCTTTCCAGCACGGCGGTAGCCATGCTGATCGCCCCTA
TGGCGGTAGATGTGGGCCTGAAAATGGGCATCAGTCCCCAGGCCTGTGCCATGTCTGTAGCCATTGCCTGTTCTGCGGTA
TTTATTTCTCCGCTTGGTTCGGCAGTACATATGCTTGTTCGTGAGCCGGGCGGGTACAGCCTGAAGGACTACGCCAAGGT
CGGTGCGCCCTTGCTGCTGTTGGCGCTGCTGGCGACAATGTTTTTTTGCTGGGTGCTTTATTTGCGTTAA

Upstream 100 bases:

>100_bases
AGGTGGTTGTCTGTCAGCATTTTCATGCAATTTGATTTTATGTGCAATTTGATCCGGTGTTAATCACCGGACGTACTATT
TTTCTGTGGAGACGTTTTTT

Downstream 100 bases:

>100_bases
CTTTCTGGATTTTCTCTGATGATCTGATACAGGCCGGGCTTGCCGCCGTTTGCACAGCCATTTATGATACGGATAACGAC
GACGTGCCGGCGGCCACGAA

Product: Citrate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 609; Mature: 609

Protein sequence:

>609_residues
MLTYDMTVTLAVLGVAVIFLVTNALRNDVVAVLIILALTLSGVLPVQEAISGFASTTVLIISCMFIVGKAIIHTGIAQRV
GEMIIRRGGRSERRLLLMIMGAAASVGAFMSSTATAAIFIPITLSVAEKTRINPRRLLMPLALAALISGMMTLVATTPNI
IVNGILRERGLETLGFFSFTPFGILILLLAMAFMLLCGQDMLAPKDSRIERKKSLSIDDLLRHHKIDKQQFLLRIPEGSD
LVDRTVARMQLSARYGITLLAVEGDGNGRRRTITPAKPEKVLQAGDLLMVIGSSNQLHTFIETFSLEQVSATASKRRNFF
QVVGLAEVMLNPESTLIGKSLKETLFQSTFQSMVLGIRRKGETLTEDVADIPLKFGDVLLVCGAWEDILRLERNKSQYLL
LTLPQDYKEVIPARQKGKITLIIMAAMVVLMAFSLLPPVTAILAATAALVLMRCVPLNSIYEVIDWQTVVMIAGILPLVL
ALQKSGIISLVSDGFIQLLSGAGPFAVLAGLFMITALLGFCLSSTAVAMLIAPMAVDVGLKMGISPQACAMSVAIACSAV
FISPLGSAVHMLVREPGGYSLKDYAKVGAPLLLLALLATMFFCWVLYLR

Sequences:

>Translated_609_residues
MLTYDMTVTLAVLGVAVIFLVTNALRNDVVAVLIILALTLSGVLPVQEAISGFASTTVLIISCMFIVGKAIIHTGIAQRV
GEMIIRRGGRSERRLLLMIMGAAASVGAFMSSTATAAIFIPITLSVAEKTRINPRRLLMPLALAALISGMMTLVATTPNI
IVNGILRERGLETLGFFSFTPFGILILLLAMAFMLLCGQDMLAPKDSRIERKKSLSIDDLLRHHKIDKQQFLLRIPEGSD
LVDRTVARMQLSARYGITLLAVEGDGNGRRRTITPAKPEKVLQAGDLLMVIGSSNQLHTFIETFSLEQVSATASKRRNFF
QVVGLAEVMLNPESTLIGKSLKETLFQSTFQSMVLGIRRKGETLTEDVADIPLKFGDVLLVCGAWEDILRLERNKSQYLL
LTLPQDYKEVIPARQKGKITLIIMAAMVVLMAFSLLPPVTAILAATAALVLMRCVPLNSIYEVIDWQTVVMIAGILPLVL
ALQKSGIISLVSDGFIQLLSGAGPFAVLAGLFMITALLGFCLSSTAVAMLIAPMAVDVGLKMGISPQACAMSVAIACSAV
FISPLGSAVHMLVREPGGYSLKDYAKVGAPLLLLALLATMFFCWVLYLR
>Mature_609_residues
MLTYDMTVTLAVLGVAVIFLVTNALRNDVVAVLIILALTLSGVLPVQEAISGFASTTVLIISCMFIVGKAIIHTGIAQRV
GEMIIRRGGRSERRLLLMIMGAAASVGAFMSSTATAAIFIPITLSVAEKTRINPRRLLMPLALAALISGMMTLVATTPNI
IVNGILRERGLETLGFFSFTPFGILILLLAMAFMLLCGQDMLAPKDSRIERKKSLSIDDLLRHHKIDKQQFLLRIPEGSD
LVDRTVARMQLSARYGITLLAVEGDGNGRRRTITPAKPEKVLQAGDLLMVIGSSNQLHTFIETFSLEQVSATASKRRNFF
QVVGLAEVMLNPESTLIGKSLKETLFQSTFQSMVLGIRRKGETLTEDVADIPLKFGDVLLVCGAWEDILRLERNKSQYLL
LTLPQDYKEVIPARQKGKITLIIMAAMVVLMAFSLLPPVTAILAATAALVLMRCVPLNSIYEVIDWQTVVMIAGILPLVL
ALQKSGIISLVSDGFIQLLSGAGPFAVLAGLFMITALLGFCLSSTAVAMLIAPMAVDVGLKMGISPQACAMSVAIACSAV
FISPLGSAVHMLVREPGGYSLKDYAKVGAPLLLLALLATMFFCWVLYLR

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=604, Percent_Identity=36.4238410596026, Blast_Score=363, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004680
- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF03600 CitMHS; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 65738; Mature: 65738

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTYDMTVTLAVLGVAVIFLVTNALRNDVVAVLIILALTLSGVLPVQEAISGFASTTVLI
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
ISCMFIVGKAIIHTGIAQRVGEMIIRRGGRSERRLLLMIMGAAASVGAFMSSTATAAIFI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHCCCCEEEEE
PITLSVAEKTRINPRRLLMPLALAALISGMMTLVATTPNIIVNGILRERGLETLGFFSFT
EEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCHHCC
PFGILILLLAMAFMLLCGQDMLAPKDSRIERKKSLSIDDLLRHHKIDKQQFLLRIPEGSD
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCHHHEEECCCCCC
LVDRTVARMQLSARYGITLLAVEGDGNGRRRTITPAKPEKVLQAGDLLMVIGSSNQLHTF
HHHHHHHHHHHHHCCCEEEEEEECCCCCCEECCCCCCHHHHHCCCCEEEEECCCCHHHHH
IETFSLEQVSATASKRRNFFQVVGLAEVMLNPESTLIGKSLKETLFQSTFQSMVLGIRRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GETLTEDVADIPLKFGDVLLVCGAWEDILRLERNKSQYLLLTLPQDYKEVIPARQKGKIT
CCHHHHHHHHCCCCCCCEEEEECCHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCCCCEE
LIIMAAMVVLMAFSLLPPVTAILAATAALVLMRCVPLNSIYEVIDWQTVVMIAGILPLVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
ALQKSGIISLVSDGFIQLLSGAGPFAVLAGLFMITALLGFCLSSTAVAMLIAPMAVDVGL
HHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KMGISPQACAMSVAIACSAVFISPLGSAVHMLVREPGGYSLKDYAKVGAPLLLLALLATM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHH
FFCWVLYLR
HHHHHHHCC
>Mature Secondary Structure
MLTYDMTVTLAVLGVAVIFLVTNALRNDVVAVLIILALTLSGVLPVQEAISGFASTTVLI
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
ISCMFIVGKAIIHTGIAQRVGEMIIRRGGRSERRLLLMIMGAAASVGAFMSSTATAAIFI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHCCCCEEEEE
PITLSVAEKTRINPRRLLMPLALAALISGMMTLVATTPNIIVNGILRERGLETLGFFSFT
EEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCHHCC
PFGILILLLAMAFMLLCGQDMLAPKDSRIERKKSLSIDDLLRHHKIDKQQFLLRIPEGSD
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCHHHEEECCCCCC
LVDRTVARMQLSARYGITLLAVEGDGNGRRRTITPAKPEKVLQAGDLLMVIGSSNQLHTF
HHHHHHHHHHHHHCCCEEEEEEECCCCCCEECCCCCCHHHHHCCCCEEEEECCCCHHHHH
IETFSLEQVSATASKRRNFFQVVGLAEVMLNPESTLIGKSLKETLFQSTFQSMVLGIRRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GETLTEDVADIPLKFGDVLLVCGAWEDILRLERNKSQYLLLTLPQDYKEVIPARQKGKIT
CCHHHHHHHHCCCCCCCEEEEECCHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCCCCEE
LIIMAAMVVLMAFSLLPPVTAILAATAALVLMRCVPLNSIYEVIDWQTVVMIAGILPLVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
ALQKSGIISLVSDGFIQLLSGAGPFAVLAGLFMITALLGFCLSSTAVAMLIAPMAVDVGL
HHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KMGISPQACAMSVAIACSAVFISPLGSAVHMLVREPGGYSLKDYAKVGAPLLLLALLATM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHH
FFCWVLYLR
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]