| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is ampG [H]
Identifier: 220904607
GI number: 220904607
Start: 1606838
End: 1608058
Strand: Reverse
Name: ampG [H]
Synonym: Ddes_1339
Alternate gene names: 220904607
Gene position: 1608058-1606838 (Counterclockwise)
Preceding gene: 220904608
Following gene: 220904606
Centisome position: 55.96
GC content: 51.6
Gene sequence:
>1221_bases ATGCTTCATGTCCTTTCCAGAAAGCCTCTTTCCGTATGGTTGCTGATTACCAGTCTGTATACGACACAATTTCTTGGGCT AAGCTTTTTTTCAGTGGCCCTGGTTGCCATTCTGCGTGGGCAGGGAGCGTCGCTTGAGCAGGTCAGTTCGGTATATATTC TGGGTATGATCGGTGCCTGCAAATTCCTGTGGGCTCCCCTGGTGGACAGGGTCCGGTTTACGCCCAGGATCGGTCACTTT CGTGGCTGGTTGCTGCTGATGCAGTCTCTGATGGTTGTTGTATTATGTTTTCTCGCCAACCTGGATGTAACGACAGATTT TGGCGCCATTTACCTGCTCTGCATCGTCATGGCTGTTTGTGGCGCTACGCAGGACATAGCAACGGATGCTCTCGTCTGTT CCCTGTTGACGGAAGAGGAGCGGGGCATGGGCAATGGCATACAGACTGCGGGCGGCATGTTCGGGTTTATGGTAGGGGCT GGGCTTGTTCTTATGGCCTACCCGAGCCTTGGCTGGCAGAAAGCAGTGATGATACTGGCAGCGGGAACCGCCATCTCGTT AGCACAGCTGATATTTTTTGTTGAACCTGAATTTAAAATTCAAAGTCGAAAAGGTTGGCAAGTGGCAACGCGCCTTGTCA CTTTCTGGCAGCAACCGGGTAGCCTTAGCTGGCTGGCCATGCTTTTGCTTTTTCCTGTGGGTATCACAATTGCCTACAGC CTTTTAACGCCATTTCTTGTGGACAGCCTGTGGCCGCTGGAGCGCATTGGTCTCATTGTGAATGTTTTGGGCCCCGTGAT GGGTATTGCCTCCAGCCTGTTTGCGGGGTGGCTGATTTCACGTTTCGGGCGCAGCAAGACTATGAACTACTGCATTGTCA TGCAATTTCTGAGTGTTGTTGCCGTGCTATTCGTCGTGCAGGGGCACGTTTCAACCATGGCGGTAGTTTTTGCTGTTGTT ATACATTTTTTGGGTTACGTACCTTCCGTCACCATGCTGAGCACGCTGATGATGGATCGCGCATCCAGAGAAAGTCCTGC CACTGACTATACTGTGCAGTTCAGCGTTTATCAGTTTTTTGCCATGGGTACGGGGGGCCTCGGCATGGTCATGGCCGGAC GTCTGGGCTATGTCGGCGCAATTTTCGGAGCTATCGGCTGTGCCGTTTTGGCAGGCTTTGTTGCAAAATTTTATATATCA AAGCGAGTTATGTGCCGGTAG
Upstream 100 bases:
>100_bases TGGGGCGACTTCTGGGCGCTCGTTCTGATTCTTGGTGTTGTTTGTGCTCTCTCAATACGCTGCTATCGGCGCACGTTGGA TTAACTTCGCAGGTACGTTC
Downstream 100 bases:
>100_bases CAGCAATCTCAATGCATTAACGCTTATTGGCTTTTAACCAGGCAATGGCCAGTCACGCGCCGTCAGGGGGTGAGCTTTCA CCAGCCTGCCCTGTTCAACC
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MLHVLSRKPLSVWLLITSLYTTQFLGLSFFSVALVAILRGQGASLEQVSSVYILGMIGACKFLWAPLVDRVRFTPRIGHF RGWLLLMQSLMVVVLCFLANLDVTTDFGAIYLLCIVMAVCGATQDIATDALVCSLLTEEERGMGNGIQTAGGMFGFMVGA GLVLMAYPSLGWQKAVMILAAGTAISLAQLIFFVEPEFKIQSRKGWQVATRLVTFWQQPGSLSWLAMLLLFPVGITIAYS LLTPFLVDSLWPLERIGLIVNVLGPVMGIASSLFAGWLISRFGRSKTMNYCIVMQFLSVVAVLFVVQGHVSTMAVVFAVV IHFLGYVPSVTMLSTLMMDRASRESPATDYTVQFSVYQFFAMGTGGLGMVMAGRLGYVGAIFGAIGCAVLAGFVAKFYIS KRVMCR
Sequences:
>Translated_406_residues MLHVLSRKPLSVWLLITSLYTTQFLGLSFFSVALVAILRGQGASLEQVSSVYILGMIGACKFLWAPLVDRVRFTPRIGHF RGWLLLMQSLMVVVLCFLANLDVTTDFGAIYLLCIVMAVCGATQDIATDALVCSLLTEEERGMGNGIQTAGGMFGFMVGA GLVLMAYPSLGWQKAVMILAAGTAISLAQLIFFVEPEFKIQSRKGWQVATRLVTFWQQPGSLSWLAMLLLFPVGITIAYS LLTPFLVDSLWPLERIGLIVNVLGPVMGIASSLFAGWLISRFGRSKTMNYCIVMQFLSVVAVLFVVQGHVSTMAVVFAVV IHFLGYVPSVTMLSTLMMDRASRESPATDYTVQFSVYQFFAMGTGGLGMVMAGRLGYVGAIFGAIGCAVLAGFVAKFYIS KRVMCR >Mature_406_residues MLHVLSRKPLSVWLLITSLYTTQFLGLSFFSVALVAILRGQGASLEQVSSVYILGMIGACKFLWAPLVDRVRFTPRIGHF RGWLLLMQSLMVVVLCFLANLDVTTDFGAIYLLCIVMAVCGATQDIATDALVCSLLTEEERGMGNGIQTAGGMFGFMVGA GLVLMAYPSLGWQKAVMILAAGTAISLAQLIFFVEPEFKIQSRKGWQVATRLVTFWQQPGSLSWLAMLLLFPVGITIAYS LLTPFLVDSLWPLERIGLIVNVLGPVMGIASSLFAGWLISRFGRSKTMNYCIVMQFLSVVAVLFVVQGHVSTMAVVFAVV IHFLGYVPSVTMLSTLMMDRASRESPATDYTVQFSVYQFFAMGTGGLGMVMAGRLGYVGAIFGAIGCAVLAGFVAKFYIS KRVMCR
Specific function: Probably acts as a permease in the beta-lactamase induction system and in peptidoglycan recycling [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1786636, Length=338, Percent_Identity=29.2899408284024, Blast_Score=97, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004752 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 44210; Mature: 44210
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHVLSRKPLSVWLLITSLYTTQFLGLSFFSVALVAILRGQGASLEQVSSVYILGMIGAC CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH KFLWAPLVDRVRFTPRIGHFRGWLLLMQSLMVVVLCFLANLDVTTDFGAIYLLCIVMAVC HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH GATQDIATDALVCSLLTEEERGMGNGIQTAGGMFGFMVGAGLVLMAYPSLGWQKAVMILA CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH AGTAISLAQLIFFVEPEFKIQSRKGWQVATRLVTFWQQPGSLSWLAMLLLFPVGITIAYS CCHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH LLTPFLVDSLWPLERIGLIVNVLGPVMGIASSLFAGWLISRFGRSKTMNYCIVMQFLSVV HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AVLFVVQGHVSTMAVVFAVVIHFLGYVPSVTMLSTLMMDRASRESPATDYTVQFSVYQFF HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHH AMGTGGLGMVMAGRLGYVGAIFGAIGCAVLAGFVAKFYISKRVMCR HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLHVLSRKPLSVWLLITSLYTTQFLGLSFFSVALVAILRGQGASLEQVSSVYILGMIGAC CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH KFLWAPLVDRVRFTPRIGHFRGWLLLMQSLMVVVLCFLANLDVTTDFGAIYLLCIVMAVC HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH GATQDIATDALVCSLLTEEERGMGNGIQTAGGMFGFMVGAGLVLMAYPSLGWQKAVMILA CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH AGTAISLAQLIFFVEPEFKIQSRKGWQVATRLVTFWQQPGSLSWLAMLLLFPVGITIAYS CCHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH LLTPFLVDSLWPLERIGLIVNVLGPVMGIASSLFAGWLISRFGRSKTMNYCIVMQFLSVV HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AVLFVVQGHVSTMAVVFAVVIHFLGYVPSVTMLSTLMMDRASRESPATDYTVQFSVYQFF HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHH AMGTGGLGMVMAGRLGYVGAIFGAIGCAVLAGFVAKFYISKRVMCR HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]