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The map label for this gene is ybhR [H]

Identifier: 220904608

GI number: 220904608

Start: 1608075

End: 1609211

Strand: Reverse

Name: ybhR [H]

Synonym: Ddes_1340

Alternate gene names: 220904608

Gene position: 1609211-1608075 (Counterclockwise)

Preceding gene: 220904609

Following gene: 220904607

Centisome position: 56.0

GC content: 55.15

Gene sequence:

>1137_bases
ATGTTCGCGGGTTTTTCCTTCCATCGGTTCTTTGCGCTGCTCACCAAGGAGCTGATCCAGATGAGGCGCGACAAGGCGAC
ATTTTCCATGCTGCTCAGCGTGCCCCTGATGGAAATCCTTCTATTCGGCTATGCCATCAATGCAGACCCGAAGCATTTGC
CGACCCTTGTGGTAGACGCTGACCAGTCAGTCATGAGCAGGTCGCTGGTCAGCACACTGGAAGTGTCGGGCTATTTTGAC
ATCACCAACCGTCATGCCACGGAGGATGAGGCGCGTAGCGCCTTGGCCAACGGGGCTGCCCAGTTTGTGGTGAATATTCC
CGTTGATTTTTCACGAAGGGTTGCACGGGGCGAATGCCCGCAGGTGTTGATTGAAGCTGATGCCACTGATCCTTCTGCAA
CGTCCGCAGCCATCGGGGCGCTGTCAGGTCTGGCGGCAAGGGCCATTGACGAAGATCTGCGGGGGCCGCTGGCCGGACTG
AAGCAGGGCAGCGCACCTTATGAATTGTTGGTTCATCGCCGGTACAATGAAGAAAATGAATCAGCCTTCAGTGTGGTGCC
GGGCATACTTGGTGTGGTTCTTTCCTCCACTATGATCATGATGACCTCCATAGCCATGACCCGCGAACGGGAGAGGGGCA
CGCTGGAGAGCCTGCTTGTGGCCCCTATCCGGCCGCTGGAAATGATGCTGGGCAAGATATCTCCCTACCTGTTGATAGGC
TTCGGCCAGATTCTTGTCATCATGACGGCGGCCAAGGTGCTCTTTCATGTACCCATGCTTGGCTCAATGCTGCTGCTGTT
TATGGTGTGCGTGGTGTTCATTTGTGCCAATCTGGCCTTGGGGTTCATCTTTTCATCCATTGCCAAGAACCAGATGCAGG
CCAACCAGGCTTCGTCAGGTTTTTTGTTGCCCTCCATCATTCTGTCCGGTTTCATGTTTCCGTACCGGGGCATGCCGGAA
TGGGCGCAATGGCTTGGCGAAATACTGCCCGTAACGCATTTCTTGCGCATAGTGCGCGGCATTCTTCTCAAGGGGAATAC
GCTGGGAGACGTCTGGGGCGACTTCTGGGCGCTCGTTCTGATTCTTGGTGTTGTTTGTGCTCTCTCAATACGCTGCTATC
GGCGCACGTTGGATTAA

Upstream 100 bases:

>100_bases
CCGCCCTTGCCTGGTCTGATGCCCATGCTTCGCTGGAAGACCTGTTCATTCTGCTTATGAACCGGGCCTTGAAAGAACAA
ACAATGACGGAGTCATCCTG

Downstream 100 bases:

>100_bases
CTTCGCAGGTACGTTCATGCTTCATGTCCTTTCCAGAAAGCCTCTTTCCGTATGGTTGCTGATTACCAGTCTGTATACGA
CACAATTTCTTGGGCTAAGC

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MFAGFSFHRFFALLTKELIQMRRDKATFSMLLSVPLMEILLFGYAINADPKHLPTLVVDADQSVMSRSLVSTLEVSGYFD
ITNRHATEDEARSALANGAAQFVVNIPVDFSRRVARGECPQVLIEADATDPSATSAAIGALSGLAARAIDEDLRGPLAGL
KQGSAPYELLVHRRYNEENESAFSVVPGILGVVLSSTMIMMTSIAMTRERERGTLESLLVAPIRPLEMMLGKISPYLLIG
FGQILVIMTAAKVLFHVPMLGSMLLLFMVCVVFICANLALGFIFSSIAKNQMQANQASSGFLLPSIILSGFMFPYRGMPE
WAQWLGEILPVTHFLRIVRGILLKGNTLGDVWGDFWALVLILGVVCALSIRCYRRTLD

Sequences:

>Translated_378_residues
MFAGFSFHRFFALLTKELIQMRRDKATFSMLLSVPLMEILLFGYAINADPKHLPTLVVDADQSVMSRSLVSTLEVSGYFD
ITNRHATEDEARSALANGAAQFVVNIPVDFSRRVARGECPQVLIEADATDPSATSAAIGALSGLAARAIDEDLRGPLAGL
KQGSAPYELLVHRRYNEENESAFSVVPGILGVVLSSTMIMMTSIAMTRERERGTLESLLVAPIRPLEMMLGKISPYLLIG
FGQILVIMTAAKVLFHVPMLGSMLLLFMVCVVFICANLALGFIFSSIAKNQMQANQASSGFLLPSIILSGFMFPYRGMPE
WAQWLGEILPVTHFLRIVRGILLKGNTLGDVWGDFWALVLILGVVCALSIRCYRRTLD
>Mature_378_residues
MFAGFSFHRFFALLTKELIQMRRDKATFSMLLSVPLMEILLFGYAINADPKHLPTLVVDADQSVMSRSLVSTLEVSGYFD
ITNRHATEDEARSALANGAAQFVVNIPVDFSRRVARGECPQVLIEADATDPSATSAAIGALSGLAARAIDEDLRGPLAGL
KQGSAPYELLVHRRYNEENESAFSVVPGILGVVLSSTMIMMTSIAMTRERERGTLESLLVAPIRPLEMMLGKISPYLLIG
FGQILVIMTAAKVLFHVPMLGSMLLLFMVCVVFICANLALGFIFSSIAKNQMQANQASSGFLLPSIILSGFMFPYRGMPE
WAQWLGEILPVTHFLRIVRGILLKGNTLGDVWGDFWALVLILGVVCALSIRCYRRTLD

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=369, Percent_Identity=27.10027100271, Blast_Score=166, Evalue=2e-42,
Organism=Escherichia coli, GI48994943, Length=370, Percent_Identity=28.3783783783784, Blast_Score=148, Evalue=5e-37,
Organism=Escherichia coli, GI1787011, Length=348, Percent_Identity=30.1724137931034, Blast_Score=148, Evalue=7e-37,
Organism=Escherichia coli, GI226510979, Length=376, Percent_Identity=28.4574468085106, Blast_Score=125, Evalue=6e-30,
Organism=Drosophila melanogaster, GI24650855, Length=364, Percent_Identity=23.6263736263736, Blast_Score=92, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24650853, Length=364, Percent_Identity=23.6263736263736, Blast_Score=92, Evalue=7e-19,
Organism=Drosophila melanogaster, GI85725260, Length=401, Percent_Identity=22.1945137157107, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI85725262, Length=401, Percent_Identity=22.1945137157107, Blast_Score=88, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 41485; Mature: 41485

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAGFSFHRFFALLTKELIQMRRDKATFSMLLSVPLMEILLFGYAINADPKHLPTLVVDA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
DQSVMSRSLVSTLEVSGYFDITNRHATEDEARSALANGAAQFVVNIPVDFSRRVARGECP
CHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHCCHHHEEEECCCCHHHHHHCCCCC
QVLIEADATDPSATSAAIGALSGLAARAIDEDLRGPLAGLKQGSAPYELLVHRRYNEENE
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHCCCCCC
SAFSVVPGILGVVLSSTMIMMTSIAMTRERERGTLESLLVAPIRPLEMMLGKISPYLLIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHCCCCHHHHH
FGQILVIMTAAKVLFHVPMLGSMLLLFMVCVVFICANLALGFIFSSIAKNQMQANQASSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
FLLPSIILSGFMFPYRGMPEWAQWLGEILPVTHFLRIVRGILLKGNTLGDVWGDFWALVL
CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
ILGVVCALSIRCYRRTLD
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFAGFSFHRFFALLTKELIQMRRDKATFSMLLSVPLMEILLFGYAINADPKHLPTLVVDA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
DQSVMSRSLVSTLEVSGYFDITNRHATEDEARSALANGAAQFVVNIPVDFSRRVARGECP
CHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHCCHHHEEEECCCCHHHHHHCCCCC
QVLIEADATDPSATSAAIGALSGLAARAIDEDLRGPLAGLKQGSAPYELLVHRRYNEENE
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHCCCCCC
SAFSVVPGILGVVLSSTMIMMTSIAMTRERERGTLESLLVAPIRPLEMMLGKISPYLLIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHCCCCHHHHH
FGQILVIMTAAKVLFHVPMLGSMLLLFMVCVVFICANLALGFIFSSIAKNQMQANQASSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
FLLPSIILSGFMFPYRGMPEWAQWLGEILPVTHFLRIVRGILLKGNTLGDVWGDFWALVL
CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
ILGVVCALSIRCYRRTLD
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]