| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904584
Identifier: 220904584
GI number: 220904584
Start: 1563912
End: 1565927
Strand: Direct
Name: 220904584
Synonym: Ddes_1316
Alternate gene names: NA
Gene position: 1563912-1565927 (Clockwise)
Preceding gene: 220904583
Following gene: 220904585
Centisome position: 54.43
GC content: 56.0
Gene sequence:
>2016_bases ATGCGCCCCACCACCATCATATCTTGCCGTCATTGTATGTTCGGTGCTCTGTCCGGCATAGCGGCCTGCTCTCTTGCACT GTTTTTTTTTATGGTTGCCGGAAATATCTTTGCTGCATCACATGTACAGGCTGCGCCCCTGTTACTGGAAGGTAAAAAAA CGCTTTTCCAGCGGGTGGTCAGTCACCCAGGGGCACGCCTCATGGCCGGCCCTGCGGCAGACGCCGCAGTGGTAAAGGAA AACGTAACACCTTTTACCGTTTTTTACGTTTACGCCCGCAATGAGGGCTGGCTTCAGGTCGGGGCAGGCGCCGCCGCCCC CGAAGGCTGGCTGGAAACGACCAGGGCAACAGACTGGAACCAGTCCCTCACCCTGCTCTTCACGCCGCGCACAGGCCGCG ACCCGGTGCTTTTCTTCAAAACAGAAAACGCGCTGAATGACGTCTGCGCCGCTCCGGATATGGACGCGCGTCTGGACAAA CTCAATGCCGAATCTGCCAGTCTGCTGCAAGGCGGCAAAATTCCGCCAAACGATTTTCCCGTGCTGGCCAGCGAACCTGC GGATGCAACCGGGGCGGTTTCAGAAAAGCGGTTTTATCTCATGCCCATTCTGGACATGAAGGACCCCTTTGACGGGGTAA AGTTTCTGCGCGTGGCTTCCATCGACCCCGGCGGCATGCCGGGCAGCCAGAGTGGCAAAAGCGGCCCGCCCAAAACAGGC ATAGCCCTTGTCATAGATACCACAATTTCCATGAAGCCATACATAGATCAAAGCCTTAACGTGGTGCGCCAGATATACGA CAAAATTGAACAGGACAAGCTGGAAGACAACGTGGGTTTTGCTGTGGTTGCTTTTCGCAACAGCACAAAAGCCACTCCAG GTCTAAGCTATGTTGCTGAAGTTGTAAGCGATTTCACTACGGCAAAAAACCGTAAAAGCCTTGAAGAAAAGCTCTCCAAG GTGCAGGAAGCCACCGTCTCCAGCCACGACTTCAATGAAGACTCCCTGGCAGGCGTGTACAAGGCCGTAGAGACCCTCAA CTGGGGTGATTATTCCTCGCGGCTCATCCTGCTCATTACCGATGCCGGTCCTCTCAAAAGCACGGACAAATACGCCTCTG TCAGTATGGGGCCCAGTGAGCTCAATGATTTTGCGCGGCAAAAAGGCATCTGGATATCCATCCTGCACATCAAAAGCCCC GGCGGAGCCAAAAACCACGCCTACGCTGAACAGAATTACCGCGCCCTGAGCAAACTCTCGGGCAATCGCTCAAACTATCA GGTGGTTGCCGCGCCCACAGCCGCAGCCGGGGCCAAGCAGTTTGCTGAGGTCGCCAAAGTGCTGGCCACAGGCATGGTGG ATATGGTCAAAAACACTGCCTTGGGCAAAGTCATGACCAAACCAAAAGACGAAAAACCGCAAAAACTTACTGCCGAGGAA GAAGCCGCCCGTCTTGCCGCCACCCTGGGCTATGCCATGCAACTGGAATATCTTGGCAAGGCGCGTGAAAATCAGGCGCC CAGCGTCGTCAGTTCGTGGATTGCCGATATGGATCTCAAACGTCTTGCCAGGAGCGAGCAAAGCCCCAGCGTTGAGGTGG CCGTACTGCTGACCAAAAACCAGCTCAATGACCTGAGCGCCCAGATCAAGGCTGTCATTGACAGTGCGGAGCGCACCAAA AAAACCGACTCGCGCGATTTCTTTCAGGGAGTGCTCTCTGCCTCCACGCGCATGGCCCGCGATCCCAATATGCCGACGCA GGGGAAAAATCTGGCGCAACTGGGTGTGCTGGCGGAATTTCTGGATGGGCTGCCCTACAAGAGCGACATCATGCTGCTGC GCGAAGAAGACTGGTATCGCATGAGCGTGGGCGAGCAGACGGCCTTTATCAACAGGCTCAAGTCACGCCTGGCCCGCTAT GAAGAGTACGACCGCGACCGCGCCAACTGGGAAAGCTTCGGCCAGCCCAATCCCGGCGACTGGGTATACCGCGTACCTTT GAGCATGCTGCCCTAG
Upstream 100 bases:
>100_bases TCCGGCGCAGGTAGCCATTTTACCGGCAGATCCGGTGATATTCAGGCTGCAACCGCGCCGATGCTGTCAATATAAAACGG AGTCCGGGAGGATACCCGCC
Downstream 100 bases:
>100_bases ACTGAGTCTGACAAGGCCTTCATATGGATAATCAGGTTTTTTCCCTGCGGCAGATAAGCAAAAGCCGCCCCGGCGCTGAA GGCTTCAGCCTGCATGTGGA
Product: PpkA-like protein
Products: NA
Alternate protein names: PpkA-Related Protein; Serine/Threonine Protein Kinase; Serine/Threonine Protein Kinase PpkA; Von Willebrand Factor Type A Domain-Containing Protein; Protein Kinase; Exported Protein
Number of amino acids: Translated: 671; Mature: 671
Protein sequence:
>671_residues MRPTTIISCRHCMFGALSGIAACSLALFFFMVAGNIFAASHVQAAPLLLEGKKTLFQRVVSHPGARLMAGPAADAAVVKE NVTPFTVFYVYARNEGWLQVGAGAAAPEGWLETTRATDWNQSLTLLFTPRTGRDPVLFFKTENALNDVCAAPDMDARLDK LNAESASLLQGGKIPPNDFPVLASEPADATGAVSEKRFYLMPILDMKDPFDGVKFLRVASIDPGGMPGSQSGKSGPPKTG IALVIDTTISMKPYIDQSLNVVRQIYDKIEQDKLEDNVGFAVVAFRNSTKATPGLSYVAEVVSDFTTAKNRKSLEEKLSK VQEATVSSHDFNEDSLAGVYKAVETLNWGDYSSRLILLITDAGPLKSTDKYASVSMGPSELNDFARQKGIWISILHIKSP GGAKNHAYAEQNYRALSKLSGNRSNYQVVAAPTAAAGAKQFAEVAKVLATGMVDMVKNTALGKVMTKPKDEKPQKLTAEE EAARLAATLGYAMQLEYLGKARENQAPSVVSSWIADMDLKRLARSEQSPSVEVAVLLTKNQLNDLSAQIKAVIDSAERTK KTDSRDFFQGVLSASTRMARDPNMPTQGKNLAQLGVLAEFLDGLPYKSDIMLLREEDWYRMSVGEQTAFINRLKSRLARY EEYDRDRANWESFGQPNPGDWVYRVPLSMLP
Sequences:
>Translated_671_residues MRPTTIISCRHCMFGALSGIAACSLALFFFMVAGNIFAASHVQAAPLLLEGKKTLFQRVVSHPGARLMAGPAADAAVVKE NVTPFTVFYVYARNEGWLQVGAGAAAPEGWLETTRATDWNQSLTLLFTPRTGRDPVLFFKTENALNDVCAAPDMDARLDK LNAESASLLQGGKIPPNDFPVLASEPADATGAVSEKRFYLMPILDMKDPFDGVKFLRVASIDPGGMPGSQSGKSGPPKTG IALVIDTTISMKPYIDQSLNVVRQIYDKIEQDKLEDNVGFAVVAFRNSTKATPGLSYVAEVVSDFTTAKNRKSLEEKLSK VQEATVSSHDFNEDSLAGVYKAVETLNWGDYSSRLILLITDAGPLKSTDKYASVSMGPSELNDFARQKGIWISILHIKSP GGAKNHAYAEQNYRALSKLSGNRSNYQVVAAPTAAAGAKQFAEVAKVLATGMVDMVKNTALGKVMTKPKDEKPQKLTAEE EAARLAATLGYAMQLEYLGKARENQAPSVVSSWIADMDLKRLARSEQSPSVEVAVLLTKNQLNDLSAQIKAVIDSAERTK KTDSRDFFQGVLSASTRMARDPNMPTQGKNLAQLGVLAEFLDGLPYKSDIMLLREEDWYRMSVGEQTAFINRLKSRLARY EEYDRDRANWESFGQPNPGDWVYRVPLSMLP >Mature_671_residues MRPTTIISCRHCMFGALSGIAACSLALFFFMVAGNIFAASHVQAAPLLLEGKKTLFQRVVSHPGARLMAGPAADAAVVKE NVTPFTVFYVYARNEGWLQVGAGAAAPEGWLETTRATDWNQSLTLLFTPRTGRDPVLFFKTENALNDVCAAPDMDARLDK LNAESASLLQGGKIPPNDFPVLASEPADATGAVSEKRFYLMPILDMKDPFDGVKFLRVASIDPGGMPGSQSGKSGPPKTG IALVIDTTISMKPYIDQSLNVVRQIYDKIEQDKLEDNVGFAVVAFRNSTKATPGLSYVAEVVSDFTTAKNRKSLEEKLSK VQEATVSSHDFNEDSLAGVYKAVETLNWGDYSSRLILLITDAGPLKSTDKYASVSMGPSELNDFARQKGIWISILHIKSP GGAKNHAYAEQNYRALSKLSGNRSNYQVVAAPTAAAGAKQFAEVAKVLATGMVDMVKNTALGKVMTKPKDEKPQKLTAEE EAARLAATLGYAMQLEYLGKARENQAPSVVSSWIADMDLKRLARSEQSPSVEVAVLLTKNQLNDLSAQIKAVIDSAERTK KTDSRDFFQGVLSASTRMARDPNMPTQGKNLAQLGVLAEFLDGLPYKSDIMLLREEDWYRMSVGEQTAFINRLKSRLARY EEYDRDRANWESFGQPNPGDWVYRVPLSMLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73314; Mature: 73314
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPTTIISCRHCMFGALSGIAACSLALFFFMVAGNIFAASHVQAAPLLLEGKKTLFQRVV CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEECCHHHHHHHHH SHPGARLMAGPAADAAVVKENVTPFTVFYVYARNEGWLQVGAGAAAPEGWLETTRATDWN HCCCCEEEECCCCCHHHHHCCCCEEEEEEEEECCCCCEEECCCCCCCCHHHHHCCCCCCC QSLTLLFTPRTGRDPVLFFKTENALNDVCAAPDMDARLDKLNAESASLLQGGKIPPNDFP CCEEEEECCCCCCCCEEEEECCCHHHHHHCCCCCHHHHHHCCCCHHHHHCCCCCCCCCCC VLASEPADATGAVSEKRFYLMPILDMKDPFDGVKFLRVASIDPGGMPGSQSGKSGPPKTG EEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC IALVIDTTISMKPYIDQSLNVVRQIYDKIEQDKLEDNVGFAVVAFRNSTKATPGLSYVAE EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHH VVSDFTTAKNRKSLEEKLSKVQEATVSSHDFNEDSLAGVYKAVETLNWGDYSSRLILLIT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEE DAGPLKSTDKYASVSMGPSELNDFARQKGIWISILHIKSPGGAKNHAYAEQNYRALSKLS CCCCCCCCCCCEEECCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHC GNRSNYQVVAAPTAAAGAKQFAEVAKVLATGMVDMVKNTALGKVMTKPKDEKPQKLTAEE CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH EAARLAATLGYAMQLEYLGKARENQAPSVVSSWIADMDLKRLARSEQSPSVEVAVLLTKN HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC QLNDLSAQIKAVIDSAERTKKTDSRDFFQGVLSASTRMARDPNMPTQGKNLAQLGVLAEF HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH LDGLPYKSDIMLLREEDWYRMSVGEQTAFINRLKSRLARYEEYDRDRANWESFGQPNPGD HCCCCCCCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCC WVYRVPLSMLP EEEECCHHCCC >Mature Secondary Structure MRPTTIISCRHCMFGALSGIAACSLALFFFMVAGNIFAASHVQAAPLLLEGKKTLFQRVV CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEECCHHHHHHHHH SHPGARLMAGPAADAAVVKENVTPFTVFYVYARNEGWLQVGAGAAAPEGWLETTRATDWN HCCCCEEEECCCCCHHHHHCCCCEEEEEEEEECCCCCEEECCCCCCCCHHHHHCCCCCCC QSLTLLFTPRTGRDPVLFFKTENALNDVCAAPDMDARLDKLNAESASLLQGGKIPPNDFP CCEEEEECCCCCCCCEEEEECCCHHHHHHCCCCCHHHHHHCCCCHHHHHCCCCCCCCCCC VLASEPADATGAVSEKRFYLMPILDMKDPFDGVKFLRVASIDPGGMPGSQSGKSGPPKTG EEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC IALVIDTTISMKPYIDQSLNVVRQIYDKIEQDKLEDNVGFAVVAFRNSTKATPGLSYVAE EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHH VVSDFTTAKNRKSLEEKLSKVQEATVSSHDFNEDSLAGVYKAVETLNWGDYSSRLILLIT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEE DAGPLKSTDKYASVSMGPSELNDFARQKGIWISILHIKSPGGAKNHAYAEQNYRALSKLS CCCCCCCCCCCEEECCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHC GNRSNYQVVAAPTAAAGAKQFAEVAKVLATGMVDMVKNTALGKVMTKPKDEKPQKLTAEE CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH EAARLAATLGYAMQLEYLGKARENQAPSVVSSWIADMDLKRLARSEQSPSVEVAVLLTKN HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC QLNDLSAQIKAVIDSAERTKKTDSRDFFQGVLSASTRMARDPNMPTQGKNLAQLGVLAEF HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH LDGLPYKSDIMLLREEDWYRMSVGEQTAFINRLKSRLARYEEYDRDRANWESFGQPNPGD HCCCCCCCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCC WVYRVPLSMLP EEEECCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA