| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is yheT [H]
Identifier: 220904575
GI number: 220904575
Start: 1550113
End: 1551111
Strand: Reverse
Name: yheT [H]
Synonym: Ddes_1307
Alternate gene names: 220904575
Gene position: 1551111-1550113 (Counterclockwise)
Preceding gene: 220904577
Following gene: 220904573
Centisome position: 53.98
GC content: 58.36
Gene sequence:
>999_bases ATGCCGATACTTGATTCACGCTATACCTGCCCCTGGTATGTAACAAATCCCCATGCCAACACCATGTGGCCTGTGCTTTT TCGTCCGTATCCCGACCTTCCGCCGGATACGCGGCGGCAGCGCATTGAAACGCCTGACGGGGATTTTCTGGATGTAGACA TGCAGCCCGCCGTGAATGCACGCGGCGGCAATTTCGGGCAAGGGCGCGGCATAGCCATAATATCCCACGGGCTTGAAGGC AACAGCCGCCGCAAGTATGTGCTTGGCATGGGTGCTGTCCTGCGGTCTTTGGGCCTTGATGTGCTTGCCTGGAACATGCG CTCCTGCTCGGGCGAGCCTGGCCGCACCTCGCGTCTATACCATATGGGGGAAACAGAAGACCTTTCCACGGTAGTGCGCT TTGCAGAAATGTTTGACCGGCCGCTGCTGCTGACAGGGTTCAGCATGGGGGGAAACCAGATATGCCGTTATCTCGGTCGG GGGCAGATATCGCCTCTGATAAAGGGGGCTGTTGCCGTGTCTGTGCCGTGCGATCTTTCTGCTGCTGCCCCTGTTATGGA CGGCCCGGCCTGCCGCCTGTACATGTGGTATTTTTTGAGAACGTTGCGCAAAAAAGTGCAGTACAATGCCGGGCGTTTTC CCGGCTACCCTTCGGTTGAGGGCATTGAGGGCATCCGCACCTTTTCGGAATTTGACAGCCGCTTTACTGCGCCGGCCTTC GGCTTTTCGTCAGCCAGCGACTACTGGGAAAAAAATACAGTGCTGCCTGACCTGCCCAACATCACTGTTCCCACATATCT GCTGCTTGCGGCGGACGATCCTTTCTGTGCTCCATCGTGCTACCCGTGGGATGCCGCGGAAGCCAGCCCACACCTGCATC TCGAAGTCGCGGCCCACGGCGGACATGTGGGCTTTGTGCAGCCCGGCGGTCTCTATTACAGTGAGCAGCGCGCCCGTGGC TTTGTCGGTATGCTGCTGGAGCAGGGAGCCTTTGACTGA
Upstream 100 bases:
>100_bases TAAACTGGTTTTTTGCATACACTGAAGGTATACGAGGCCGGACGGTCTGCCAAGATGTTCAATTGATGTTCAGCAATAAA ATACACCTGTTGAGAAAACC
Downstream 100 bases:
>100_bases ACGGGCAGCGGGAGAGGTTGCCGGATACTGTCATGCCCGGCGGGCGGGATGCGGATTGCGGGCTTCGGAACATGTATTCT GCCTGTTACGCTTCGGCTTG
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MPILDSRYTCPWYVTNPHANTMWPVLFRPYPDLPPDTRRQRIETPDGDFLDVDMQPAVNARGGNFGQGRGIAIISHGLEG NSRRKYVLGMGAVLRSLGLDVLAWNMRSCSGEPGRTSRLYHMGETEDLSTVVRFAEMFDRPLLLTGFSMGGNQICRYLGR GQISPLIKGAVAVSVPCDLSAAAPVMDGPACRLYMWYFLRTLRKKVQYNAGRFPGYPSVEGIEGIRTFSEFDSRFTAPAF GFSSASDYWEKNTVLPDLPNITVPTYLLLAADDPFCAPSCYPWDAAEASPHLHLEVAAHGGHVGFVQPGGLYYSEQRARG FVGMLLEQGAFD
Sequences:
>Translated_332_residues MPILDSRYTCPWYVTNPHANTMWPVLFRPYPDLPPDTRRQRIETPDGDFLDVDMQPAVNARGGNFGQGRGIAIISHGLEG NSRRKYVLGMGAVLRSLGLDVLAWNMRSCSGEPGRTSRLYHMGETEDLSTVVRFAEMFDRPLLLTGFSMGGNQICRYLGR GQISPLIKGAVAVSVPCDLSAAAPVMDGPACRLYMWYFLRTLRKKVQYNAGRFPGYPSVEGIEGIRTFSEFDSRFTAPAF GFSSASDYWEKNTVLPDLPNITVPTYLLLAADDPFCAPSCYPWDAAEASPHLHLEVAAHGGHVGFVQPGGLYYSEQRARG FVGMLLEQGAFD >Mature_331_residues PILDSRYTCPWYVTNPHANTMWPVLFRPYPDLPPDTRRQRIETPDGDFLDVDMQPAVNARGGNFGQGRGIAIISHGLEGN SRRKYVLGMGAVLRSLGLDVLAWNMRSCSGEPGRTSRLYHMGETEDLSTVVRFAEMFDRPLLLTGFSMGGNQICRYLGRG QISPLIKGAVAVSVPCDLSAAAPVMDGPACRLYMWYFLRTLRKKVQYNAGRFPGYPSVEGIEGIRTFSEFDSRFTAPAFG FSSASDYWEKNTVLPDLPNITVPTYLLLAADDPFCAPSCYPWDAAEASPHLHLEVAAHGGHVGFVQPGGLYYSEQRARGF VGMLLEQGAFD
Specific function: Unknown
COG id: COG0429
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. AB hydrolase 4 family [H]
Homologues:
Organism=Homo sapiens, GI23397663, Length=335, Percent_Identity=28.955223880597, Blast_Score=133, Evalue=3e-31, Organism=Homo sapiens, GI194578891, Length=269, Percent_Identity=28.6245353159851, Blast_Score=112, Evalue=4e-25, Organism=Escherichia coli, GI1789752, Length=298, Percent_Identity=32.8859060402685, Blast_Score=149, Evalue=3e-37, Organism=Caenorhabditis elegans, GI17566110, Length=332, Percent_Identity=26.2048192771084, Blast_Score=96, Evalue=3e-20, Organism=Caenorhabditis elegans, GI71985405, Length=330, Percent_Identity=26.0606060606061, Blast_Score=88, Evalue=6e-18, Organism=Saccharomyces cerevisiae, GI6323866, Length=268, Percent_Identity=27.9850746268657, Blast_Score=97, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6319655, Length=263, Percent_Identity=27.3764258555133, Blast_Score=79, Evalue=8e-16, Organism=Drosophila melanogaster, GI281398151, Length=319, Percent_Identity=28.8401253918495, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI24652003, Length=319, Percent_Identity=28.8401253918495, Blast_Score=116, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012020 - InterPro: IPR000073 - InterPro: IPR000952 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 36705; Mature: 36574
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPILDSRYTCPWYVTNPHANTMWPVLFRPYPDLPPDTRRQRIETPDGDFLDVDMQPAVNA CCCCCCCCCCCEEEECCCCCCCCEEEECCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCC RGGNFGQGRGIAIISHGLEGNSRRKYVLGMGAVLRSLGLDVLAWNMRSCSGEPGRTSRLY CCCCCCCCCCEEEEEECCCCCCCEEEEEEHHHHHHHCCCCEEEECHHHCCCCCCCCCEEE HMGETEDLSTVVRFAEMFDRPLLLTGFSMGGNQICRYLGRGQISPLIKGAVAVSVPCDLS ECCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCCHHHHCEEEEECCCCCC AAAPVMDGPACRLYMWYFLRTLRKKVQYNAGRFPGYPSVEGIEGIRTFSEFDSRFTAPAF CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC GFSSASDYWEKNTVLPDLPNITVPTYLLLAADDPFCAPSCYPWDAAEASPHLHLEVAAHG CCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECC GHVGFVQPGGLYYSEQRARGFVGMLLEQGAFD CEEEEECCCCCEECHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PILDSRYTCPWYVTNPHANTMWPVLFRPYPDLPPDTRRQRIETPDGDFLDVDMQPAVNA CCCCCCCCCCEEEECCCCCCCCEEEECCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCC RGGNFGQGRGIAIISHGLEGNSRRKYVLGMGAVLRSLGLDVLAWNMRSCSGEPGRTSRLY CCCCCCCCCCEEEEEECCCCCCCEEEEEEHHHHHHHCCCCEEEECHHHCCCCCCCCCEEE HMGETEDLSTVVRFAEMFDRPLLLTGFSMGGNQICRYLGRGQISPLIKGAVAVSVPCDLS ECCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCCHHHHCEEEEECCCCCC AAAPVMDGPACRLYMWYFLRTLRKKVQYNAGRFPGYPSVEGIEGIRTFSEFDSRFTAPAF CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC GFSSASDYWEKNTVLPDLPNITVPTYLLLAADDPFCAPSCYPWDAAEASPHLHLEVAAHG CCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECC GHVGFVQPGGLYYSEQRARGFVGMLLEQGAFD CEEEEECCCCCEECHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]