| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is 220904543
Identifier: 220904543
GI number: 220904543
Start: 1501886
End: 1502500
Strand: Direct
Name: 220904543
Synonym: Ddes_1274
Alternate gene names: NA
Gene position: 1501886-1502500 (Clockwise)
Preceding gene: 220904542
Following gene: 220904544
Centisome position: 52.27
GC content: 58.7
Gene sequence:
>615_bases ATGGTAGAGATGCGTGTTTTCGGCCTGACCATTGACCCGCAGACCAAAACCCCCATAGTGATACTGCGCGAAATGGAAGG AGAGACCGTACTGCCCGTCTGGGTGGGGGCAATGGAAGCCATGGCCGTTTCGCTTGTACTCAATAAAGAAAACCTGCCCC GGCCCCTTACGCACGATCTTTTGCTTATGGCACTGAGGGCGCTCAAGGCCGGGCTTGTCAAAGTGGAAATCACCGATCTC AAGGATGGGGTATTTTTTGCCCTGCTGGTGCTGCAAGGCCCCGGCGGGCGCGTACGTGTGGACTGCCGCCCTTCGGATGC CATAGCTCTGGCCATGCGGGCCGAAGCACCGATCATGGTCAACGAGGACGTGCTGCGCCGTGCCGCCGAGGCTCAGGAAA AAGCCGAACAGCGCCTGCATGAGGAAGTCCTTTCCCCTGTGCCTGACGCCGCTACCGACATGGTGCGCAAGGCCGGGGCG CGCAAAGAGGCAGACATGCTGCACAGCCGGCTGCTGCACGGCACGGTTCTTTCTGATGATATTGATCCGGAAGAAGAACG CCGCTTTCGTGAAATGCTGCGTTCGCTTGAACCCATCTCACGGCGAAAAATGTAG
Upstream 100 bases:
>100_bases TACCGTTGCCCGCCGGGGCTGATCACACAGGTTTTCTGGTGCAAACCGTCATTACAGAGGCCAAGAAGCACAGCCTGCTG GCCGTGCGCACGGGGGAGCC
Downstream 100 bases:
>100_bases GAAAACGGCTTTTCCATAAGCTTTCTAGAAAACTTTCAATGCCACCTAACATAAAGTTTTTATTTAATTAACAAGCAAAA ACACTTCCCGGCCCGGCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MVEMRVFGLTIDPQTKTPIVILREMEGETVLPVWVGAMEAMAVSLVLNKENLPRPLTHDLLLMALRALKAGLVKVEITDL KDGVFFALLVLQGPGGRVRVDCRPSDAIALAMRAEAPIMVNEDVLRRAAEAQEKAEQRLHEEVLSPVPDAATDMVRKAGA RKEADMLHSRLLHGTVLSDDIDPEEERRFREMLRSLEPISRRKM
Sequences:
>Translated_204_residues MVEMRVFGLTIDPQTKTPIVILREMEGETVLPVWVGAMEAMAVSLVLNKENLPRPLTHDLLLMALRALKAGLVKVEITDL KDGVFFALLVLQGPGGRVRVDCRPSDAIALAMRAEAPIMVNEDVLRRAAEAQEKAEQRLHEEVLSPVPDAATDMVRKAGA RKEADMLHSRLLHGTVLSDDIDPEEERRFREMLRSLEPISRRKM >Mature_204_residues MVEMRVFGLTIDPQTKTPIVILREMEGETVLPVWVGAMEAMAVSLVLNKENLPRPLTHDLLLMALRALKAGLVKVEITDL KDGVFFALLVLQGPGGRVRVDCRPSDAIALAMRAEAPIMVNEDVLRRAAEAQEKAEQRLHEEVLSPVPDAATDMVRKAGA RKEADMLHSRLLHGTVLSDDIDPEEERRFREMLRSLEPISRRKM
Specific function: Unknown
COG id: COG1259
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003729 [H]
Pfam domain/function: PF02577 DUF151 [H]
EC number: NA
Molecular weight: Translated: 22820; Mature: 22820
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEMRVFGLTIDPQTKTPIVILREMEGETVLPVWVGAMEAMAVSLVLNKENLPRPLTHDL CCEEEEEEEEECCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHHEECCCCCCCCHHHHH LLMALRALKAGLVKVEITDLKDGVFFALLVLQGPGGRVRVDCRPSDAIALAMRAEAPIMV HHHHHHHHHCCEEEEEEECCCCCCEEEEEEEECCCCEEEEEECCCCCEEEEEECCCCEEE NEDVLRRAAEAQEKAEQRLHEEVLSPVPDAATDMVRKAGARKEADMLHSRLLHGTVLSDD CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC IDPEEERRFREMLRSLEPISRRKM CCCHHHHHHHHHHHHHCHHHHCCC >Mature Secondary Structure MVEMRVFGLTIDPQTKTPIVILREMEGETVLPVWVGAMEAMAVSLVLNKENLPRPLTHDL CCEEEEEEEEECCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHHEECCCCCCCCHHHHH LLMALRALKAGLVKVEITDLKDGVFFALLVLQGPGGRVRVDCRPSDAIALAMRAEAPIMV HHHHHHHHHCCEEEEEEECCCCCCEEEEEEEECCCCEEEEEECCCCCEEEEEECCCCEEE NEDVLRRAAEAQEKAEQRLHEEVLSPVPDAATDMVRKAGARKEADMLHSRLLHGTVLSDD CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC IDPEEERRFREMLRSLEPISRRKM CCCHHHHHHHHHHHHHCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]