| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is flgE [H]
Identifier: 220904530
GI number: 220904530
Start: 1482602
End: 1485028
Strand: Direct
Name: flgE [H]
Synonym: Ddes_1261
Alternate gene names: 220904530
Gene position: 1482602-1485028 (Clockwise)
Preceding gene: 220904529
Following gene: 220904533
Centisome position: 51.6
GC content: 54.84
Gene sequence:
>2427_bases ATGGGTCTTTCAGCAAGTATGTGGACAAGCGTTTCAGGCTTGCTCAGCCACGGTCAGAAGATGAACGTTGTCGGCAACAA TATCGCCAACGTGAGTACGCTGGGTTTTAAAAGTCAGCGTATGGACTTCAATGACTACCTGTACCGGGGCATCGGGACCA CCAGTGGTCCCAGCCAGATCGGTGCCGGCGCCAGCGTCTATGCCATATTGGGCGACTTTTCCCAGGGTTCGCTTGAGAGC ACCAACTCGGTGACGGACCTTGCCATTGACGGCAACGGTTTTTTTCAGGTGCGCAAGCCCAACAGCAAGCAGATGTATTA CACGCGCGCAGGTGACTTTTATTTCAACAAGGACCGCGAACTTCAGAACCCTGAGGGCTATCTGCTGCAGGGCTGGAAGG TGAACAACGAAAAAAAGCTCACCTTTAACAGCGGCGCAACTAACCTGGGCAATACCGACCTCAGCAAATCCGCCTATGTC GGTTCGGGTACGCCCACTGACATTGTGCTGGACAGCTGGAATATCATTCCCCAGCAGACTACCAATGTCACCTTTACCAT GGGGCTTACCAACGACGGCAAGGGTGACCGCACCACCAGCAACACCAGCCCCATGACCGCCCTCTTCGACCTGTGGGATG CCAGCAGCAAGCCGCCCCTGGCGGATACGGCCTATGCCACGCAGTCCAGCATTGACGTCTATGATGAAGGCGGTGGTACG CACACCCTGACGGTCTACTATGATCAGGTTGATGCAAGAAAGACCGACAGCAACGGCAACACCATCTATGACATCAAGGG ACTGCCCGCCGGATACACCATATATGAATATCTGGTAACCATCCCGCCCTCTGAAGACAGGCGTAGCTATGGTGGCGAAG GTTATAACGCTGCCACCAATACGTGGACCAAAGAACCCACCAAATTTTATGACGACCCCATCACGGGGACCAACAAGCAG GCTGGCGTGCTCATGAGCGGTGTCATGATCTTTGACGCCAGCGGGCAGCTCGTCAACCAGACTGCGTACAGCTACGGCGC GACGGAAACACCGACAGCAAATAACCAAGTGGCTGTCAATCCGTCCGAAAAATCTTCGTGGCAGCCCACCAGAACGTCCA GCAACGGTCTGCCTGTTTTTTCGGCAAACTTCAGCGGACAGCCTCTGGCAAACAGCGTGAGCGAAACCATGCAGACCAGC GTGGGCGGCACTCCTGTGAGCCAGGTGCAAAACTACATTACCGAACTGGATTTCGGCCTCAAAAACATCGGCAACCCGGC ATGGAACAACCCCACCGCCACCGCCGTGAAGACAAACAGCCTTGGACAACCCGTTGATACCGGCGGCAATGCCCTGGGTA TGGACAAATACGGCTACTACTACCTCGGTGCCCCCGAGCCGGGTTCTTACGGAACCGCAACACCAGTCGGTGGCGGCGCG GCCGAACCGGTCTATGCCGACTCCACAGGCTATTACTATAAAAATGGCGCCAATAAAGTCTATGGTTCCGCCTCCGTTAA TGGAGCAACGGTTGAAGCGATGAGCAACGGCAGCAGTTATTACTTTATAGACGCTGCAAACGGCAACGCCAACTGCTACA ATACAACAGTTGTCGGCGGCAACACAGTACCTGCCTACCAGGACAGCTATGGCTATTACCATATCGGCGCAAACGGTCCG GTATATGGGCAGACTCCTGGCGGTGTTGACGTGCTGCACGATAGCGGTGGCTATTATCTGGACGACGGCACGGTGCCGCA TAACTACATCACCACCAGTGACTTTACGGCCATAACGGCTACGGCCTTCAAGCCTACAGCCTACACGGCTCCCACGGATG CCTCGCGCCCCGTCGCGGACACAGAAACAGCCAACAGCAGCCTGGCCAGCCTGACAACCATGTCTCGGGTCAGTGGCACT TCGCCTACGGGCGTGCCGGTGTTTGAAAACGTCATCAACTACGGCACAACCATCCCAACCATGACGGCCGTGGAACGCCA GGAATATGCCAGTGTGGCCAATACGACCTCTTATACAGTACAAAACCGCACGCAGGACGGATATGCCTCCGGAACACTGA GCAACGTGAACATTGATAACGGTGGCGTAGTTTACGGTATATACTCCAACGGCAAGACCATTCCGCTCTATCAAATCGCC TTGTATGATTTCCAGAACCATCAGGGGCTGTATCGCGAAGGTGGCAACCTTTTCTCTGCCACCAACGACTCGGGCGAACC CCAGTTGGGCGTGGCGGGCGATAATGGCTTCGGCAAAACCAAGGCGTATAACATCGAGCAATCAAACGTAGATATGACCA CGGAATTCGTGCAGATGATTTCGACACAGCGCGGATTCCAGGCAAACTCCAAGGGCATAACCACGGTGGATACCATGCTT GAAACTGTTATCGGCATGAAGAGATAA
Upstream 100 bases:
>100_bases GCAATACGAATGCCTGACGACAAACAGGAGCCAGGGCTGCGCCAGTAGCGCGTCCTCTCTGAAAATAGATATCCCCCTAT CCCGATACACGGAGGAAATT
Downstream 100 bases:
>100_bases CAAAAATTGTAATCTGAAAGGCCGGAGAGCCGGACCCGGGCGTGAGCGACGGTCCGGCCCCCTCCACAGCGTTGGGGATA GCGCTGCACCTTTCTCTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 808; Mature: 807
Protein sequence:
>808_residues MGLSASMWTSVSGLLSHGQKMNVVGNNIANVSTLGFKSQRMDFNDYLYRGIGTTSGPSQIGAGASVYAILGDFSQGSLES TNSVTDLAIDGNGFFQVRKPNSKQMYYTRAGDFYFNKDRELQNPEGYLLQGWKVNNEKKLTFNSGATNLGNTDLSKSAYV GSGTPTDIVLDSWNIIPQQTTNVTFTMGLTNDGKGDRTTSNTSPMTALFDLWDASSKPPLADTAYATQSSIDVYDEGGGT HTLTVYYDQVDARKTDSNGNTIYDIKGLPAGYTIYEYLVTIPPSEDRRSYGGEGYNAATNTWTKEPTKFYDDPITGTNKQ AGVLMSGVMIFDASGQLVNQTAYSYGATETPTANNQVAVNPSEKSSWQPTRTSSNGLPVFSANFSGQPLANSVSETMQTS VGGTPVSQVQNYITELDFGLKNIGNPAWNNPTATAVKTNSLGQPVDTGGNALGMDKYGYYYLGAPEPGSYGTATPVGGGA AEPVYADSTGYYYKNGANKVYGSASVNGATVEAMSNGSSYYFIDAANGNANCYNTTVVGGNTVPAYQDSYGYYHIGANGP VYGQTPGGVDVLHDSGGYYLDDGTVPHNYITTSDFTAITATAFKPTAYTAPTDASRPVADTETANSSLASLTTMSRVSGT SPTGVPVFENVINYGTTIPTMTAVERQEYASVANTTSYTVQNRTQDGYASGTLSNVNIDNGGVVYGIYSNGKTIPLYQIA LYDFQNHQGLYREGGNLFSATNDSGEPQLGVAGDNGFGKTKAYNIEQSNVDMTTEFVQMISTQRGFQANSKGITTVDTML ETVIGMKR
Sequences:
>Translated_808_residues MGLSASMWTSVSGLLSHGQKMNVVGNNIANVSTLGFKSQRMDFNDYLYRGIGTTSGPSQIGAGASVYAILGDFSQGSLES TNSVTDLAIDGNGFFQVRKPNSKQMYYTRAGDFYFNKDRELQNPEGYLLQGWKVNNEKKLTFNSGATNLGNTDLSKSAYV GSGTPTDIVLDSWNIIPQQTTNVTFTMGLTNDGKGDRTTSNTSPMTALFDLWDASSKPPLADTAYATQSSIDVYDEGGGT HTLTVYYDQVDARKTDSNGNTIYDIKGLPAGYTIYEYLVTIPPSEDRRSYGGEGYNAATNTWTKEPTKFYDDPITGTNKQ AGVLMSGVMIFDASGQLVNQTAYSYGATETPTANNQVAVNPSEKSSWQPTRTSSNGLPVFSANFSGQPLANSVSETMQTS VGGTPVSQVQNYITELDFGLKNIGNPAWNNPTATAVKTNSLGQPVDTGGNALGMDKYGYYYLGAPEPGSYGTATPVGGGA AEPVYADSTGYYYKNGANKVYGSASVNGATVEAMSNGSSYYFIDAANGNANCYNTTVVGGNTVPAYQDSYGYYHIGANGP VYGQTPGGVDVLHDSGGYYLDDGTVPHNYITTSDFTAITATAFKPTAYTAPTDASRPVADTETANSSLASLTTMSRVSGT SPTGVPVFENVINYGTTIPTMTAVERQEYASVANTTSYTVQNRTQDGYASGTLSNVNIDNGGVVYGIYSNGKTIPLYQIA LYDFQNHQGLYREGGNLFSATNDSGEPQLGVAGDNGFGKTKAYNIEQSNVDMTTEFVQMISTQRGFQANSKGITTVDTML ETVIGMKR >Mature_807_residues GLSASMWTSVSGLLSHGQKMNVVGNNIANVSTLGFKSQRMDFNDYLYRGIGTTSGPSQIGAGASVYAILGDFSQGSLEST NSVTDLAIDGNGFFQVRKPNSKQMYYTRAGDFYFNKDRELQNPEGYLLQGWKVNNEKKLTFNSGATNLGNTDLSKSAYVG SGTPTDIVLDSWNIIPQQTTNVTFTMGLTNDGKGDRTTSNTSPMTALFDLWDASSKPPLADTAYATQSSIDVYDEGGGTH TLTVYYDQVDARKTDSNGNTIYDIKGLPAGYTIYEYLVTIPPSEDRRSYGGEGYNAATNTWTKEPTKFYDDPITGTNKQA GVLMSGVMIFDASGQLVNQTAYSYGATETPTANNQVAVNPSEKSSWQPTRTSSNGLPVFSANFSGQPLANSVSETMQTSV GGTPVSQVQNYITELDFGLKNIGNPAWNNPTATAVKTNSLGQPVDTGGNALGMDKYGYYYLGAPEPGSYGTATPVGGGAA EPVYADSTGYYYKNGANKVYGSASVNGATVEAMSNGSSYYFIDAANGNANCYNTTVVGGNTVPAYQDSYGYYHIGANGPV YGQTPGGVDVLHDSGGYYLDDGTVPHNYITTSDFTAITATAFKPTAYTAPTDASRPVADTETANSSLASLTTMSRVSGTS PTGVPVFENVINYGTTIPTMTAVERQEYASVANTTSYTVQNRTQDGYASGTLSNVNIDNGGVVYGIYSNGKTIPLYQIAL YDFQNHQGLYREGGNLFSATNDSGEPQLGVAGDNGFGKTKAYNIEQSNVDMTTEFVQMISTQRGFQANSKGITTVDTMLE TVIGMKR
Specific function: Unknown
COG id: COG1749
COG function: function code N; Flagellar hook protein FlgE
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787316, Length=134, Percent_Identity=41.7910447761194, Blast_Score=98, Evalue=2e-21, Organism=Escherichia coli, GI1787318, Length=138, Percent_Identity=39.8550724637681, Blast_Score=87, Evalue=4e-18,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR011491 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 [H]
Pfam domain/function: PF06429 DUF1078; PF07559 FlaE; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 86049; Mature: 85918
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLSASMWTSVSGLLSHGQKMNVVGNNIANVSTLGFKSQRMDFNDYLYRGIGTTSGPSQI CCCCHHHHHHHHHHHHCCCEEEECCCCCCCEEECCCCHHCCCHHHHHHHCCCCCCCHHHH GAGASVYAILGDFSQGSLESTNSVTDLAIDGNGFFQVRKPNSKQMYYTRAGDFYFNKDRE CCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCEEECCCCC LQNPEGYLLQGWKVNNEKKLTFNSGATNLGNTDLSKSAYVGSGTPTDIVLDSWNIIPQQT CCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCC TNVTFTMGLTNDGKGDRTTSNTSPMTALFDLWDASSKPPLADTAYATQSSIDVYDEGGGT CCEEEEEEECCCCCCCCCCCCCCCCEEEHHHHCCCCCCCCCCCHHCCCCCCEEEECCCCE HTLTVYYDQVDARKTDSNGNTIYDIKGLPAGYTIYEYLVTIPPSEDRRSYGGEGYNAATN EEEEEEEECCCCEECCCCCCEEEEECCCCCCCEEEEEEEECCCCHHHHHCCCCCCCCCCC TWTKEPTKFYDDPITGTNKQAGVLMSGVMIFDASGQLVNQTAYSYGATETPTANNQVAVN CCCCCCHHHCCCCCCCCCCCCCEEEEEEEEECCCCCEEHHHHHHCCCCCCCCCCCEEEEC PSEKSSWQPTRTSSNGLPVFSANFSGQPLANSVSETMQTSVGGTPVSQVQNYITELDFGL CCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH KNIGNPAWNNPTATAVKTNSLGQPVDTGGNALGMDKYGYYYLGAPEPGSYGTATPVGGGA HHCCCCCCCCCCEEEEEECCCCCCCCCCCCEECCCCCCEEEEECCCCCCCCCCCCCCCCC AEPVYADSTGYYYKNGANKVYGSASVNGATVEAMSNGSSYYFIDAANGNANCYNTTVVGG CCCEEECCCCCEEECCCCEEEECCCCCCEEEEEECCCCEEEEEECCCCCCCEEEEEEECC NTVPAYQDSYGYYHIGANGPVYGQTPGGVDVLHDSGGYYLDDGTVPHNYITTSDFTAITA CCCCCEECCCCEEEECCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCEEECCCCEEEEE TAFKPTAYTAPTDASRPVADTETANSSLASLTTMSRVSGTSPTGVPVFENVINYGTTIPT EEECCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCC MTAVERQEYASVANTTSYTVQNRTQDGYASGTLSNVNIDNGGVVYGIYSNGKTIPLYQIA HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEECCCCEEEEEECCCCEEEEEEEE LYDFQNHQGLYREGGNLFSATNDSGEPQLGVAGDNGFGKTKAYNIEQSNVDMTTEFVQMI EEECCCCCCHHHCCCCEEEECCCCCCCCEEEECCCCCCCCEEEECCCCCCCHHHHHHHHH STQRGFQANSKGITTVDTMLETVIGMKR HHHCCCCCCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure GLSASMWTSVSGLLSHGQKMNVVGNNIANVSTLGFKSQRMDFNDYLYRGIGTTSGPSQI CCCHHHHHHHHHHHHCCCEEEECCCCCCCEEECCCCHHCCCHHHHHHHCCCCCCCHHHH GAGASVYAILGDFSQGSLESTNSVTDLAIDGNGFFQVRKPNSKQMYYTRAGDFYFNKDRE CCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCEEECCCCC LQNPEGYLLQGWKVNNEKKLTFNSGATNLGNTDLSKSAYVGSGTPTDIVLDSWNIIPQQT CCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCC TNVTFTMGLTNDGKGDRTTSNTSPMTALFDLWDASSKPPLADTAYATQSSIDVYDEGGGT CCEEEEEEECCCCCCCCCCCCCCCCEEEHHHHCCCCCCCCCCCHHCCCCCCEEEECCCCE HTLTVYYDQVDARKTDSNGNTIYDIKGLPAGYTIYEYLVTIPPSEDRRSYGGEGYNAATN EEEEEEEECCCCEECCCCCCEEEEECCCCCCCEEEEEEEECCCCHHHHHCCCCCCCCCCC TWTKEPTKFYDDPITGTNKQAGVLMSGVMIFDASGQLVNQTAYSYGATETPTANNQVAVN CCCCCCHHHCCCCCCCCCCCCCEEEEEEEEECCCCCEEHHHHHHCCCCCCCCCCCEEEEC PSEKSSWQPTRTSSNGLPVFSANFSGQPLANSVSETMQTSVGGTPVSQVQNYITELDFGL CCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH KNIGNPAWNNPTATAVKTNSLGQPVDTGGNALGMDKYGYYYLGAPEPGSYGTATPVGGGA HHCCCCCCCCCCEEEEEECCCCCCCCCCCCEECCCCCCEEEEECCCCCCCCCCCCCCCCC AEPVYADSTGYYYKNGANKVYGSASVNGATVEAMSNGSSYYFIDAANGNANCYNTTVVGG CCCEEECCCCCEEECCCCEEEECCCCCCEEEEEECCCCEEEEEECCCCCCCEEEEEEECC NTVPAYQDSYGYYHIGANGPVYGQTPGGVDVLHDSGGYYLDDGTVPHNYITTSDFTAITA CCCCCEECCCCEEEECCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCEEECCCCEEEEE TAFKPTAYTAPTDASRPVADTETANSSLASLTTMSRVSGTSPTGVPVFENVINYGTTIPT EEECCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCC MTAVERQEYASVANTTSYTVQNRTQDGYASGTLSNVNIDNGGVVYGIYSNGKTIPLYQIA HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEECCCCEEEEEECCCCEEEEEEEE LYDFQNHQGLYREGGNLFSATNDSGEPQLGVAGDNGFGKTKAYNIEQSNVDMTTEFVQMI EEECCCCCCHHHCCCCEEEECCCCCCCCEEEECCCCCCCCEEEECCCCCCCHHHHHHHHH STQRGFQANSKGITTVDTMLETVIGMKR HHHCCCCCCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8206841 [H]