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The map label for this gene is flgD [H]

Identifier: 220904529

GI number: 220904529

Start: 1481636

End: 1482490

Strand: Direct

Name: flgD [H]

Synonym: Ddes_1260

Alternate gene names: 220904529

Gene position: 1481636-1482490 (Clockwise)

Preceding gene: 220904528

Following gene: 220904530

Centisome position: 51.56

GC content: 51.58

Gene sequence:

>855_bases
ATGTCCAGCATTACACAGTCACTGAACAGAACCAATAATGAATTCAATACCGCCCTGAGCAAGCAAAAGGGCAGTAATCT
GGACAAGGATTCCTTCATGCTGCTGCTGGTTACGCAGTTCAAGTACCAGGACCCGCTCAATCCGATGGAAGACAAGGAAT
TTATTGCCCAGATGGCGCAATTCTCCAGTCTTGAGCAGCTCATGAATCTCAATACGAGCATGGAAGGCCTTACAAACGCC
ACCAATAACCAGCAGATGATCAATGCCACGTCTTACATAGGCAAGCAGGTTACTGTCAGTGGTAATACCATCGGCAAGGT
CACCGACGAAACCACCAAGGAATCTACCATTACGCGCTTCCGGTACGCCCCTGCGGACAATACCGTGGGCGGAACCATCA
CAGTACGCGATGCCGACAATAACGTCGTATACGTTGAAGAAGTCAGCCCCAAAAATAAGGGAACCACATACGAATTTTTG
TGGAACGGCAAGGCTACTGACGGAACTGTTGCTGGCGATGGCGTCTATACGGTCAACCTTGTGTTGCGCGATTCCAATGG
CGATGCGGTTCTTTCTGACCAGGTAGTGGACGCCAAGGTTACCGGCGTGGTCAACGACGGCGGCGTGGTCTATCTCGGTC
TTGAGGGCGGCCAGCTCATGCCGCTTGCCAATGTGCGGCAGGTTGCTGAACCTGCCACCGTTGCCGCCAAGCCGGACGAC
AAGGACAAGGAAGAAGGCGAAGACAAGGAATCTGAAGACGACAAGGACGAGGAACAGCCCGAATCCCGTGCAAGCGCGAT
GAGTATTGGTGATGTCAATATCAGCAATATCAACTTTAGCGGCAGACTTTTTTAA

Upstream 100 bases:

>100_bases
ACGTTGGAACAGCCTGTGCATTCCCATACGCATGCGGCAAGATATGCCACCCGCTCTTTGCATGTGGTGGCGTAAAAACA
GCCCGGCGTGAGGAGTAGCC

Downstream 100 bases:

>100_bases
CAGGCAACAACGCAATACGAATGCCTGACGACAAACAGGAGCCAGGGCTGCGCCAGTAGCGCGTCCTCTCTGAAAATAGA
TATCCCCCTATCCCGATACA

Product: flagellar hook capping protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MSSITQSLNRTNNEFNTALSKQKGSNLDKDSFMLLLVTQFKYQDPLNPMEDKEFIAQMAQFSSLEQLMNLNTSMEGLTNA
TNNQQMINATSYIGKQVTVSGNTIGKVTDETTKESTITRFRYAPADNTVGGTITVRDADNNVVYVEEVSPKNKGTTYEFL
WNGKATDGTVAGDGVYTVNLVLRDSNGDAVLSDQVVDAKVTGVVNDGGVVYLGLEGGQLMPLANVRQVAEPATVAAKPDD
KDKEEGEDKESEDDKDEEQPESRASAMSIGDVNISNINFSGRLF

Sequences:

>Translated_284_residues
MSSITQSLNRTNNEFNTALSKQKGSNLDKDSFMLLLVTQFKYQDPLNPMEDKEFIAQMAQFSSLEQLMNLNTSMEGLTNA
TNNQQMINATSYIGKQVTVSGNTIGKVTDETTKESTITRFRYAPADNTVGGTITVRDADNNVVYVEEVSPKNKGTTYEFL
WNGKATDGTVAGDGVYTVNLVLRDSNGDAVLSDQVVDAKVTGVVNDGGVVYLGLEGGQLMPLANVRQVAEPATVAAKPDD
KDKEEGEDKESEDDKDEEQPESRASAMSIGDVNISNINFSGRLF
>Mature_283_residues
SSITQSLNRTNNEFNTALSKQKGSNLDKDSFMLLLVTQFKYQDPLNPMEDKEFIAQMAQFSSLEQLMNLNTSMEGLTNAT
NNQQMINATSYIGKQVTVSGNTIGKVTDETTKESTITRFRYAPADNTVGGTITVRDADNNVVYVEEVSPKNKGTTYEFLW
NGKATDGTVAGDGVYTVNLVLRDSNGDAVLSDQVVDAKVTGVVNDGGVVYLGLEGGQLMPLANVRQVAEPATVAAKPDDK
DKEEGEDKESEDDKDEEQPESRASAMSIGDVNISNINFSGRLF

Specific function: Required for flagellar hook formation. May act as a scaffolding protein [H]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgD family [H]

Homologues:

Organism=Escherichia coli, GI1787315, Length=204, Percent_Identity=33.8235294117647, Blast_Score=89, Evalue=2e-19,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005648 [H]

Pfam domain/function: PF03963 FlgD [H]

EC number: NA

Molecular weight: Translated: 30867; Mature: 30736

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSITQSLNRTNNEFNTALSKQKGSNLDKDSFMLLLVTQFKYQDPLNPMEDKEFIAQMAQ
CCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEEEEEHHCCCCCCCCHHHHHHHHHHH
FSSLEQLMNLNTSMEGLTNATNNQQMINATSYIGKQVTVSGNTIGKVTDETTKESTITRF
HHHHHHHHCCCCCHHHHCCCCCCCEEEEHHHHCCCEEEECCCCCCCCCCCCCCCCCEEEE
RYAPADNTVGGTITVRDADNNVVYVEEVSPKNKGTTYEFLWNGKATDGTVAGDGVYTVNL
EECCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCEEEEEECCCCCCCEEECCCEEEEEE
VLRDSNGDAVLSDQVVDAKVTGVVNDGGVVYLGLEGGQLMPLANVRQVAEPATVAAKPDD
EEECCCCCEEEECCEECEEEEEEEECCCEEEEEECCCCCCCHHHHHHHCCCCEEEECCCC
KDKEEGEDKESEDDKDEEQPESRASAMSIGDVNISNINFSGRLF
CCHHCCCCCCCCCCCCHHCHHHHHHEEEECCEEEEEECCCCEEC
>Mature Secondary Structure 
SSITQSLNRTNNEFNTALSKQKGSNLDKDSFMLLLVTQFKYQDPLNPMEDKEFIAQMAQ
CHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEEEEEHHCCCCCCCCHHHHHHHHHHH
FSSLEQLMNLNTSMEGLTNATNNQQMINATSYIGKQVTVSGNTIGKVTDETTKESTITRF
HHHHHHHHCCCCCHHHHCCCCCCCEEEEHHHHCCCEEEECCCCCCCCCCCCCCCCCEEEE
RYAPADNTVGGTITVRDADNNVVYVEEVSPKNKGTTYEFLWNGKATDGTVAGDGVYTVNL
EECCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCEEEEEECCCCCCCEEECCCEEEEEE
VLRDSNGDAVLSDQVVDAKVTGVVNDGGVVYLGLEGGQLMPLANVRQVAEPATVAAKPDD
EEECCCCCEEEECCEECEEEEEEEECCCEEEEEECCCCCCCHHHHHHHCCCCEEEECCCC
KDKEEGEDKESEDDKDEEQPESRASAMSIGDVNISNINFSGRLF
CCHHCCCCCCCCCCCCHHCHHHHHHEEEECCEEEEEECCCCEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]