| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904520
Identifier: 220904520
GI number: 220904520
Start: 1470077
End: 1470847
Strand: Direct
Name: 220904520
Synonym: Ddes_1251
Alternate gene names: NA
Gene position: 1470077-1470847 (Clockwise)
Preceding gene: 220904519
Following gene: 220904521
Centisome position: 51.16
GC content: 51.23
Gene sequence:
>771_bases ATGAGTAATGCCGTTTACTTTGATCAGATAAAGCAGCTTGTGGAGCTGCAAAAGGTTGATGACGCCATTTATGCGGTACG GCAGGACATGGAGCGTGCCCCCAATGAGCTGAACTCGCTTGAGCAGCGTTTCAATGCCAGCGAGACGCAGCGTAACTATA TTGTGGACAAGCTGACCCATCTTCAGGAACAGCAAAAACGCCTTTCACTTGAAATCGATGATGATGCCGCCCGTATTAAA AAGAGCAAAAACAAGCTCATGCAGGTAGAAAATACACGTGAGTATCATGCAATGATGCGCGAAATGGACGGCATGGAAAA AGTGAACCGCTCCCGTGAAGAGGAAAAAATGACTCTCATGGAAGAGCTGCAGTTCCAAAAAGACGCTTTGGCCGAACTTG ATCTTACGCACTCTGCCGTCAAGGCCGAACTTGAAGTCAAACGCGACGGTCTTGAAGAAAAACTGCAAAAATGTACTGCC GCCCTTGCGGAACTCAATGCAAAACGGGCCCAGGTCAGCAAGCACATCCCCCAGCCTGTGTTCATGCGCTATGAGTTTAT CCGCGAACGGCTGGAGCACCCGGTTATCGTGGCTGTCAGGGAAGGTATCTGCTCGGGCTGCCACATTGCCGTTCCGCCGC AGTCTTTTATCGAACTGCAGCGCGGCCAGCAGATTTTAAGTTGCCCCAACTGCCAGCGCCTCATATTCTGGTGCGAACAT TTCACCGTTGCTGAGGCGCCTCAGTGTGCGCCCAAGCCGCTGACTGATTAA
Upstream 100 bases:
>100_bases GCTCCAGCAACAGCTTCAGGGTGTTGCCGTTCACTTCGTGCCCTCGGCATCGCCTTTTCGCGCTGTTGCCCTGTCATGAC TATCAGGAGGTCTTTTTATA
Downstream 100 bases:
>100_bases TACTTTTTGGTGCATGAAAAAAGGCCGGACCGCATTGAAAAACACGCGGCCCGGTCTTGTGTGACGTGCTTCACCCATGT GCCTCCATATTGCGGGAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSNAVYFDQIKQLVELQKVDDAIYAVRQDMERAPNELNSLEQRFNASETQRNYIVDKLTHLQEQQKRLSLEIDDDAARIK KSKNKLMQVENTREYHAMMREMDGMEKVNRSREEEKMTLMEELQFQKDALAELDLTHSAVKAELEVKRDGLEEKLQKCTA ALAELNAKRAQVSKHIPQPVFMRYEFIRERLEHPVIVAVREGICSGCHIAVPPQSFIELQRGQQILSCPNCQRLIFWCEH FTVAEAPQCAPKPLTD
Sequences:
>Translated_256_residues MSNAVYFDQIKQLVELQKVDDAIYAVRQDMERAPNELNSLEQRFNASETQRNYIVDKLTHLQEQQKRLSLEIDDDAARIK KSKNKLMQVENTREYHAMMREMDGMEKVNRSREEEKMTLMEELQFQKDALAELDLTHSAVKAELEVKRDGLEEKLQKCTA ALAELNAKRAQVSKHIPQPVFMRYEFIRERLEHPVIVAVREGICSGCHIAVPPQSFIELQRGQQILSCPNCQRLIFWCEH FTVAEAPQCAPKPLTD >Mature_255_residues SNAVYFDQIKQLVELQKVDDAIYAVRQDMERAPNELNSLEQRFNASETQRNYIVDKLTHLQEQQKRLSLEIDDDAARIKK SKNKLMQVENTREYHAMMREMDGMEKVNRSREEEKMTLMEELQFQKDALAELDLTHSAVKAELEVKRDGLEEKLQKCTAA LAELNAKRAQVSKHIPQPVFMRYEFIRERLEHPVIVAVREGICSGCHIAVPPQSFIELQRGQQILSCPNCQRLIFWCEHF TVAEAPQCAPKPLTD
Specific function: Unknown
COG id: COG1579
COG function: function code R; Zn-ribbon protein, possibly nucleic acid-binding
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29742; Mature: 29611
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNAVYFDQIKQLVELQKVDDAIYAVRQDMERAPNELNSLEQRFNASETQRNYIVDKLTH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHH LQEQQKRLSLEIDDDAARIKKSKNKLMQVENTREYHAMMREMDGMEKVNRSREEEKMTLM HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EELQFQKDALAELDLTHSAVKAELEVKRDGLEEKLQKCTAALAELNAKRAQVSKHIPQPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH FMRYEFIRERLEHPVIVAVREGICSGCHIAVPPQSFIELQRGQQILSCPNCQRLIFWCEH HHHHHHHHHHHCCCEEEEEHHHCCCCCEEECCCHHHHHHHHCCHHHCCCCHHHHHHHHHH FTVAEAPQCAPKPLTD HHHHCCCCCCCCCCCC >Mature Secondary Structure SNAVYFDQIKQLVELQKVDDAIYAVRQDMERAPNELNSLEQRFNASETQRNYIVDKLTH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHH LQEQQKRLSLEIDDDAARIKKSKNKLMQVENTREYHAMMREMDGMEKVNRSREEEKMTLM HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EELQFQKDALAELDLTHSAVKAELEVKRDGLEEKLQKCTAALAELNAKRAQVSKHIPQPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH FMRYEFIRERLEHPVIVAVREGICSGCHIAVPPQSFIELQRGQQILSCPNCQRLIFWCEH HHHHHHHHHHHCCCEEEEEHHHCCCCCEEECCCHHHHHHHHCCHHHCCCCHHHHHHHHHH FTVAEAPQCAPKPLTD HHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA