| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904501
Identifier: 220904501
GI number: 220904501
Start: 1444983
End: 1445798
Strand: Reverse
Name: 220904501
Synonym: Ddes_1232
Alternate gene names: NA
Gene position: 1445798-1444983 (Counterclockwise)
Preceding gene: 220904504
Following gene: 220904500
Centisome position: 50.32
GC content: 52.45
Gene sequence:
>816_bases ATGGAATTACAACACAACAGCACGCTCGATATCTTCGATATCAAAGACCACAAAAACTGGTTTATGGCCTATGCCGCTGA GCAATGTGCCAAAGAAGAAGGCAGGCAGCATGGCGATGTTGCCCCGATGCTCCTTAAGTTGCGTCACAGCCACGCAGTGC TTGAAAATGCGGAACGTATTGTGGCTGGAGAAAGATTTTCTCCAGCCCTGGGGCGGGTCTGCCTGCTTGCCGCTCTTTAT CATGATATCGGCAGATTTGAACAATACCTGCGCTATCACACTTTTAAGGACAGGCAGTCGTGCGACCACGGAAGCCTGGG CGTACGCATACTCAAGCGTGAGCATCGCCTCATTGACGAAGAACCTGCCACACGTAAAGCAATATTGGCCGCGATAGGAC TGCATAATCGCTTTGCGCTGCCGTCTGGCCTGCCAGAGGCCACGGCAGTGGCAGCCCATGTAGTGCGCGATGCAGACAAG CTGGATATTTTACGTGTTATGGACGAGCATCTGTCCGGCCCCGGCCCGTATAATCCCACCGTTGTATTGAGCCTTCCCGA CACTCCTGGCCTGTACAGCGAAACCATACTCAAGGCTGTCAGTGAAAACCGCGTGGCGGCTTACGCTGATTTACGCAGTG TCAATGATTTTCGCCTGTTGCTGGGTACATGGTTTTTTGACATGCATTTTACGTCCAGCCGCTATCAATTCGTAGAAGAT GGCCATGCACGAAATCTTGTTCAGGGGCTGCCCACTGACGCGGCCTATGATGGAGCACGTCAGGCAATGCTTGAAAAAAT CGGCGGCAGATCATGA
Upstream 100 bases:
>100_bases AGCCGCCCGGCGGCCCAGGATGGTCTGGCAGAAATGCACAAACAGGGGTTACTGTGGAGCGCACCTTGATTTGCACGCTG CACGGGAGTACACGAACGAT
Downstream 100 bases:
>100_bases TGCCTTACCAACCTGAGCAAAGCGCACCCTCGCCACCTGCTCTGCAAAAACGCCATGCTCCCGGCCCCGCAATTCTGCTT GCCACAGGGGAAGAAAGCGA
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: HD Domain-Containing Protein; Metal-Dependent Phosphohydrolase; Metal-Dependent Phosphohydrolase HD Sub Domain Protein; HD Domain Protein; Metal-Dependent Phosphohydrolase HD Sub Domain; Metal-Dependent Phosphoesterase; Metal-Dependent Phosphohydrolase HD Region
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MELQHNSTLDIFDIKDHKNWFMAYAAEQCAKEEGRQHGDVAPMLLKLRHSHAVLENAERIVAGERFSPALGRVCLLAALY HDIGRFEQYLRYHTFKDRQSCDHGSLGVRILKREHRLIDEEPATRKAILAAIGLHNRFALPSGLPEATAVAAHVVRDADK LDILRVMDEHLSGPGPYNPTVVLSLPDTPGLYSETILKAVSENRVAAYADLRSVNDFRLLLGTWFFDMHFTSSRYQFVED GHARNLVQGLPTDAAYDGARQAMLEKIGGRS
Sequences:
>Translated_271_residues MELQHNSTLDIFDIKDHKNWFMAYAAEQCAKEEGRQHGDVAPMLLKLRHSHAVLENAERIVAGERFSPALGRVCLLAALY HDIGRFEQYLRYHTFKDRQSCDHGSLGVRILKREHRLIDEEPATRKAILAAIGLHNRFALPSGLPEATAVAAHVVRDADK LDILRVMDEHLSGPGPYNPTVVLSLPDTPGLYSETILKAVSENRVAAYADLRSVNDFRLLLGTWFFDMHFTSSRYQFVED GHARNLVQGLPTDAAYDGARQAMLEKIGGRS >Mature_271_residues MELQHNSTLDIFDIKDHKNWFMAYAAEQCAKEEGRQHGDVAPMLLKLRHSHAVLENAERIVAGERFSPALGRVCLLAALY HDIGRFEQYLRYHTFKDRQSCDHGSLGVRILKREHRLIDEEPATRKAILAAIGLHNRFALPSGLPEATAVAAHVVRDADK LDILRVMDEHLSGPGPYNPTVVLSLPDTPGLYSETILKAVSENRVAAYADLRSVNDFRLLLGTWFFDMHFTSSRYQFVED GHARNLVQGLPTDAAYDGARQAMLEKIGGRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30442; Mature: 30442
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELQHNSTLDIFDIKDHKNWFMAYAAEQCAKEEGRQHGDVAPMLLKLRHSHAVLENAERI CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH VAGERFSPALGRVCLLAALYHDIGRFEQYLRYHTFKDRQSCDHGSLGVRILKREHRLIDE HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC EPATRKAILAAIGLHNRFALPSGLPEATAVAAHVVRDADKLDILRVMDEHLSGPGPYNPT CCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCE VVLSLPDTPGLYSETILKAVSENRVAAYADLRSVNDFRLLLGTWFFDMHFTSSRYQFVED EEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHEECCCHHHHHHC GHARNLVQGLPTDAAYDGARQAMLEKIGGRS CHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MELQHNSTLDIFDIKDHKNWFMAYAAEQCAKEEGRQHGDVAPMLLKLRHSHAVLENAERI CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH VAGERFSPALGRVCLLAALYHDIGRFEQYLRYHTFKDRQSCDHGSLGVRILKREHRLIDE HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC EPATRKAILAAIGLHNRFALPSGLPEATAVAAHVVRDADKLDILRVMDEHLSGPGPYNPT CCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCE VVLSLPDTPGLYSETILKAVSENRVAAYADLRSVNDFRLLLGTWFFDMHFTSSRYQFVED EEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHEECCCHHHHHHC GHARNLVQGLPTDAAYDGARQAMLEKIGGRS CHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA