| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904504
Identifier: 220904504
GI number: 220904504
Start: 1449629
End: 1450711
Strand: Reverse
Name: 220904504
Synonym: Ddes_1235
Alternate gene names: NA
Gene position: 1450711-1449629 (Counterclockwise)
Preceding gene: 220904531
Following gene: 220904501
Centisome position: 50.49
GC content: 52.91
Gene sequence:
>1083_bases ATGGCGCGCGTTCTTTATGGCATTCACGGCACGGGGCACGGCCATGCCATGCGCGGCTTGACCATTGCCCGTCGTCTGGG CAAACACGAGTTCCTGTTTGTGGCCGACGACGATGCCCCAAAAATTCTTGAACCGGAATTTTCCGTGCGCCGCCTGCCCA ACCTGGGTACGGTATTCAAAAATTACAAGGTGGACATGGCTGCCACCATTAAAAAAGCCATACCGCTGCTTTGGCACAGA AAACGGTATATTGAACAGGTTTTACGCCTCATTGACGAATTCAAGCCGGATGTCTGCATGACAGATCTGGAATACTTCGT GCCACGTGCGGCGGAAAAGGCCGGTCTGCCCTGCCTGACACTGGACCATCAGCATATTATCACCTGTTGCAGTCACAACC TGCCCTTCGACATGTGGTGGGACAGTTTTGTGCAGGGGCTGACGCCACGGTATCTTTTTCGTCCCACGATGGAAAATCTT ATCATATCCTTTTACGCGCCGCCGGTATTGCCCCAATACAAGGCGCGTGTGGCTCCTCCCATTTTACGTGACAGCGTGCT GGACCTGAATCCGCGCGATGACGGACATGTGCTTGTGTACCAAAGCAATTCCACACACCATAAACTGGTGGAGTTTTTGC GCGCATCCACCAGAAAGACCTGCTATGTCTTCGGGTATAGCCGCACGGAAGGGCAGGAGGGCAATGTCATCTTCATGCGC AAAAGTGAAGAGGGATTTTTACGCCTGCTTGAAGGCTGTTCGTATGTTATCCAGGGCGGTGGCCATACACTTATGGGAGA AGCCCTTTACCTTGGAAAACCCATTTTGACCCTGCCGTTGAAGGCCATGGTGGAACAGCGTTTCAACGCGCTGTATATTG AGCGGCTCGGCTACGGAATGCAGGCTGACATGCTTACCCTTGAGCCAGATCTGCTGCGGCGTTTTGAAGCCAGCCTGCCC GCATACAAACAGGCCATTGCCGCTGGAAAGTTTTGCGGCAACGAAACCGTGTTCGGCCTGGTGGACCACTTTATCAGACA TGGTTTTTTACCCGCTGCGGGTGATCCAAAAGTTGAAGAATAA
Upstream 100 bases:
>100_bases TGCCACAAGGCCTGAAGCCAGGAAGGTACGCTGGGATTATGGGCCTTCTTGCCGTAATATGATATTTTAAAACAACCTGT CTCAAGGAAAAAGGAAAAAT
Downstream 100 bases:
>100_bases GAAGAGAGACAGAAGCGGGCGCAGCCAACCCGTGTGGGGAAGCGCCCGCCATAGCCACCAAATCATCCAGCCATTGACAA GAGCCAGCCCAAGGCCCGTG
Product: teichoic acid biosynthesis-like protein
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyltransferase-Distantly-Related Protein; Glycosyl Transferase; UDP-Glucuronosyltransferase; UDP- Glucuronosyltransferase-Like Glycosyl Transferase; Glycosyl Transferase GT2 Family; Glycosyltransferase Family 1 Domain Protein; UDP-Glucuronosyltransferase-Like Protein; Glycosyl Transferase Gt1A
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MARVLYGIHGTGHGHAMRGLTIARRLGKHEFLFVADDDAPKILEPEFSVRRLPNLGTVFKNYKVDMAATIKKAIPLLWHR KRYIEQVLRLIDEFKPDVCMTDLEYFVPRAAEKAGLPCLTLDHQHIITCCSHNLPFDMWWDSFVQGLTPRYLFRPTMENL IISFYAPPVLPQYKARVAPPILRDSVLDLNPRDDGHVLVYQSNSTHHKLVEFLRASTRKTCYVFGYSRTEGQEGNVIFMR KSEEGFLRLLEGCSYVIQGGGHTLMGEALYLGKPILTLPLKAMVEQRFNALYIERLGYGMQADMLTLEPDLLRRFEASLP AYKQAIAAGKFCGNETVFGLVDHFIRHGFLPAAGDPKVEE
Sequences:
>Translated_360_residues MARVLYGIHGTGHGHAMRGLTIARRLGKHEFLFVADDDAPKILEPEFSVRRLPNLGTVFKNYKVDMAATIKKAIPLLWHR KRYIEQVLRLIDEFKPDVCMTDLEYFVPRAAEKAGLPCLTLDHQHIITCCSHNLPFDMWWDSFVQGLTPRYLFRPTMENL IISFYAPPVLPQYKARVAPPILRDSVLDLNPRDDGHVLVYQSNSTHHKLVEFLRASTRKTCYVFGYSRTEGQEGNVIFMR KSEEGFLRLLEGCSYVIQGGGHTLMGEALYLGKPILTLPLKAMVEQRFNALYIERLGYGMQADMLTLEPDLLRRFEASLP AYKQAIAAGKFCGNETVFGLVDHFIRHGFLPAAGDPKVEE >Mature_359_residues ARVLYGIHGTGHGHAMRGLTIARRLGKHEFLFVADDDAPKILEPEFSVRRLPNLGTVFKNYKVDMAATIKKAIPLLWHRK RYIEQVLRLIDEFKPDVCMTDLEYFVPRAAEKAGLPCLTLDHQHIITCCSHNLPFDMWWDSFVQGLTPRYLFRPTMENLI ISFYAPPVLPQYKARVAPPILRDSVLDLNPRDDGHVLVYQSNSTHHKLVEFLRASTRKTCYVFGYSRTEGQEGNVIFMRK SEEGFLRLLEGCSYVIQGGGHTLMGEALYLGKPILTLPLKAMVEQRFNALYIERLGYGMQADMLTLEPDLLRRFEASLPA YKQAIAAGKFCGNETVFGLVDHFIRHGFLPAAGDPKVEE
Specific function: Unknown
COG id: COG1819
COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40971; Mature: 40840
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARVLYGIHGTGHGHAMRGLTIARRLGKHEFLFVADDDAPKILEPEFSVRRLPNLGTVFK CCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHCCCHHHHHH NYKVDMAATIKKAIPLLWHRKRYIEQVLRLIDEFKPDVCMTDLEYFVPRAAEKAGLPCLT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHCCCCEEE LDHQHIITCCSHNLPFDMWWDSFVQGLTPRYLFRPTMENLIISFYAPPVLPQYKARVAPP ECHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHCCCHHHHHHHHCCCCCCCHHHHHCCCC ILRDSVLDLNPRDDGHVLVYQSNSTHHKLVEFLRASTRKTCYVFGYSRTEGQEGNVIFMR HHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEE KSEEGFLRLLEGCSYVIQGGGHTLMGEALYLGKPILTLPLKAMVEQRFNALYIERLGYGM ECCHHHHHHHHCCHHEEECCCCEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC QADMLTLEPDLLRRFEASLPAYKQAIAAGKFCGNETVFGLVDHFIRHGFLPAAGDPKVEE CCCEEEECHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure ARVLYGIHGTGHGHAMRGLTIARRLGKHEFLFVADDDAPKILEPEFSVRRLPNLGTVFK CEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHCCCHHHHHH NYKVDMAATIKKAIPLLWHRKRYIEQVLRLIDEFKPDVCMTDLEYFVPRAAEKAGLPCLT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHCCCCEEE LDHQHIITCCSHNLPFDMWWDSFVQGLTPRYLFRPTMENLIISFYAPPVLPQYKARVAPP ECHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHCCCHHHHHHHHCCCCCCCHHHHHCCCC ILRDSVLDLNPRDDGHVLVYQSNSTHHKLVEFLRASTRKTCYVFGYSRTEGQEGNVIFMR HHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEE KSEEGFLRLLEGCSYVIQGGGHTLMGEALYLGKPILTLPLKAMVEQRFNALYIERLGYGM ECCHHHHHHHHCCHHEEECCCCEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC QADMLTLEPDLLRRFEASLPAYKQAIAAGKFCGNETVFGLVDHFIRHGFLPAAGDPKVEE CCCEEEECHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA