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The map label for this gene is dppC [H]

Identifier: 220904485

GI number: 220904485

Start: 1428419

End: 1429255

Strand: Direct

Name: dppC [H]

Synonym: Ddes_1215

Alternate gene names: 220904485

Gene position: 1428419-1429255 (Clockwise)

Preceding gene: 220904484

Following gene: 220904486

Centisome position: 49.71

GC content: 52.81

Gene sequence:

>837_bases
ATGCTTCCCCGCGCTGTCAAAAATGCGCTTGGGCGTCATGCCATGCTGCTGATCGGGCTTTTTATTGTCCTTGGCATGTC
CCTGGCCGCCCTGCTGGCTCCGGCCCTCGCGCCGCATAATCCGGATACGCTGCATCTGAACAACATTCTTGAACCGCCCT
CTTCCCGGTTCTGGCTTGGAACAGACAGGCTCGGTCGCGATGTTTTTTCACGTCTGCTTTATGGCGGGCGGGTGTCTCTA
TGGGTCGGCTTTGTGGCTGTGGGCATCTCCATCAGCATCGGCACCACGCTTGGCCTGATAAGTGGGTATTTTCGACGGTG
GGTGGATGAAACAATCATGCGTATCGTTGACATAATGCTCTGTTTCCCCTCATTTTTTCTTATTCTAGCTGTCATTGCCT
TTCTTGAGCCCGATCTTACAAATATCATGATCGTCATTGGACTTACCTCATGGATGGGCGTTACGCGCCTCGTTCGCGCT
GAAGCTTTGAGTTTGCGCGAACGCGAATTTGTGGATGCGGCTCGCCTGGCAGGAAGTTCCACAAAAAAAATACTTTTTTA
TCACATTTTACCCAATGCCTTGGCGCCGGTGCTTATAACCGCTACTCTTGGTGTAGCCGGAGCCATCCTTGTGGAATCAA
GCCTGAGTTTTCTCGGTCTTGGCGTGCAGCCACCCACGGCAAGCTGGGGCAATATGCTTATGGAAGGTAAAGCCGTGATC
GAGAGCGCCCCTTGGCTGTCGGTTTATCCTGGATTGGCCATTCTTGTGACGGTGCTCGGCTATAACCTGCTTGGTGAAAG
TTTGAGAGATATTTTCGATCCCAGGCTGCGGCGCTGA

Upstream 100 bases:

>100_bases
TTGTTTTGGGGGCCGTGCTTACCCTCTTTGGCAATCTGCTGGCCGACATCTGCTATGGCCTGGCTGACCCGCGTATACGC
AGTGCAAAGGATAACGCCTG

Downstream 100 bases:

>100_bases
ACCATGCCGGGGCATCTTTATATTTAAAGTAAAACTTTAAAAACATACTGTGCGGACGCAAACAACATGTTGGAATACCT
TCGCATTCGCAATCTTGCTC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MLPRAVKNALGRHAMLLIGLFIVLGMSLAALLAPALAPHNPDTLHLNNILEPPSSRFWLGTDRLGRDVFSRLLYGGRVSL
WVGFVAVGISISIGTTLGLISGYFRRWVDETIMRIVDIMLCFPSFFLILAVIAFLEPDLTNIMIVIGLTSWMGVTRLVRA
EALSLREREFVDAARLAGSSTKKILFYHILPNALAPVLITATLGVAGAILVESSLSFLGLGVQPPTASWGNMLMEGKAVI
ESAPWLSVYPGLAILVTVLGYNLLGESLRDIFDPRLRR

Sequences:

>Translated_278_residues
MLPRAVKNALGRHAMLLIGLFIVLGMSLAALLAPALAPHNPDTLHLNNILEPPSSRFWLGTDRLGRDVFSRLLYGGRVSL
WVGFVAVGISISIGTTLGLISGYFRRWVDETIMRIVDIMLCFPSFFLILAVIAFLEPDLTNIMIVIGLTSWMGVTRLVRA
EALSLREREFVDAARLAGSSTKKILFYHILPNALAPVLITATLGVAGAILVESSLSFLGLGVQPPTASWGNMLMEGKAVI
ESAPWLSVYPGLAILVTVLGYNLLGESLRDIFDPRLRR
>Mature_278_residues
MLPRAVKNALGRHAMLLIGLFIVLGMSLAALLAPALAPHNPDTLHLNNILEPPSSRFWLGTDRLGRDVFSRLLYGGRVSL
WVGFVAVGISISIGTTLGLISGYFRRWVDETIMRIVDIMLCFPSFFLILAVIAFLEPDLTNIMIVIGLTSWMGVTRLVRA
EALSLREREFVDAARLAGSSTKKILFYHILPNALAPVLITATLGVAGAILVESSLSFLGLGVQPPTASWGNMLMEGKAVI
ESAPWLSVYPGLAILVTVLGYNLLGESLRDIFDPRLRR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=267, Percent_Identity=40.8239700374532, Blast_Score=213, Evalue=9e-57,
Organism=Escherichia coli, GI1787760, Length=254, Percent_Identity=41.3385826771654, Blast_Score=203, Evalue=1e-53,
Organism=Escherichia coli, GI1789964, Length=255, Percent_Identity=44.3137254901961, Blast_Score=182, Evalue=2e-47,
Organism=Escherichia coli, GI1789889, Length=243, Percent_Identity=38.2716049382716, Blast_Score=171, Evalue=4e-44,
Organism=Escherichia coli, GI1787498, Length=265, Percent_Identity=38.4905660377359, Blast_Score=165, Evalue=4e-42,
Organism=Escherichia coli, GI1787549, Length=262, Percent_Identity=35.8778625954198, Blast_Score=137, Evalue=6e-34,
Organism=Escherichia coli, GI1788505, Length=227, Percent_Identity=34.3612334801762, Blast_Score=129, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30307; Mature: 30307

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPRAVKNALGRHAMLLIGLFIVLGMSLAALLAPALAPHNPDTLHLNNILEPPSSRFWLG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEECC
TDRLGRDVFSRLLYGGRVSLWVGFVAVGISISIGTTLGLISGYFRRWVDETIMRIVDIML
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CFPSFFLILAVIAFLEPDLTNIMIVIGLTSWMGVTRLVRAEALSLREREFVDAARLAGSS
HHHHHHHHHHHHHHHCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TKKILFYHILPNALAPVLITATLGVAGAILVESSLSFLGLGVQPPTASWGNMLMEGKAVI
CHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
ESAPWLSVYPGLAILVTVLGYNLLGESLRDIFDPRLRR
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCC
>Mature Secondary Structure
MLPRAVKNALGRHAMLLIGLFIVLGMSLAALLAPALAPHNPDTLHLNNILEPPSSRFWLG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEECC
TDRLGRDVFSRLLYGGRVSLWVGFVAVGISISIGTTLGLISGYFRRWVDETIMRIVDIML
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CFPSFFLILAVIAFLEPDLTNIMIVIGLTSWMGVTRLVRAEALSLREREFVDAARLAGSS
HHHHHHHHHHHHHHHCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TKKILFYHILPNALAPVLITATLGVAGAILVESSLSFLGLGVQPPTASWGNMLMEGKAVI
CHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
ESAPWLSVYPGLAILVTVLGYNLLGESLRDIFDPRLRR
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]