| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is celB [H]
Identifier: 220904479
GI number: 220904479
Start: 1422650
End: 1424293
Strand: Direct
Name: celB [H]
Synonym: Ddes_1209
Alternate gene names: 220904479
Gene position: 1422650-1424293 (Clockwise)
Preceding gene: 220904478
Following gene: 220904482
Centisome position: 49.51
GC content: 53.89
Gene sequence:
>1644_bases ATGCCTGTTGTTCATGCCCGGGCCGGACAATTGCCCCTGCCTGAAGATCTTGAAAATATCCCGGCGCTTGTCAGCGCCTA TTTTACAGAATATCCCAATCCCGCAATTCCGGCCCAGCGTGTGAGTTTCGGAACTTCCGGGCATAGAGGTTCTTCGCAGC TTCATACCTTTAATGAAGAGCATATATACGCCATTACACAGGCAGTATGCGACTATAGAAAGGTCAAAGGCATTGACGGT CCTCTTTTTCTCGGCGGTGATACTCACGCTCTGTCTGAAGCGGCTTTTCGTTCTGCCCTTGAAGTTCTGGTAGCCAACGA TGTGCATGTGCGCATTGCACCACGTGGCATCTACACTGCCACCCCCGCCATATCACATGCCATATTGCGTTGGAATGCAG GGCGCTCCAAGGGGTTGGCCGATGGTATCGTTATTACCCCCTCGCATAACCCCCCTCGCGATGGCGGATTCAAGTACAAC CCCCCACACGGGGGGCCGGCAGAGACCGACGTTACCGACAGGATAGAAAAAGGAGCCAATGCCTATCTTGAAAACGGCAA TCGCGGAGTTCATCTCACACACCTGCGGGCGGCGCAGTCCTCTTCGCTGGTGGAAGAATACAACTTTATCCGCACCTATG TGGATGACTTGCCTAATGTCCTGGATGTAAAGGCCATCGCAGCCTCGGGCCTGCGACTTGGCGTTGATCCGCTTGGCGGA GCGAGCCTGCAAATGTGGGAACCCATAGCTGACGCCTATGGGATTGAAATTACTGTGGTGAATAAAGCCGTGGACCCCAC ATTCCGTTTTGTGCCTTTTGATAAGGACGGGAAAATCCGTATGGACTGCTCCTCGCCTTATGCCATGAATGGCCTTCTTG AGATGCGTGACCGTTTTGATCTGGCCGTTGCCTGCGACCCCGATTCAGACCGCCACGGCATTGTCACGGGGCAGGGGTTG ATGAACCCCAATCACTTCCTGTCTGTAGCCGCATGGTATTTGTTCCGTACGCGCCGCTCATGGTCATCTGCCAGTGGCAT TGGCAAGACATTGGTAACCAGTGCTCTGCTGGACAGAGTGGGGCAGGAAGCAAACCGCCCGGTGGTAGAAGTGCCTGTGG GGTTCAAGTGGTTCGTACCCTATCTTTTGAACGGACATTGTGGAATGGGGTGTGAAGAAAGCGCCGGGGCTTCGTTTCTG CGCTTTGATGGCAGTCCATGGAGCACCGATAAGGATGGTCCTCTCATGTGCCTGCTGGCAGCGGAAATGTTGGCTGTGGA GCAATCCTCCCCCGCTGAACTGTATGAAAAACTTACAGAACGCTTGGGCTGCCCAGTATATCAGCGGCTGGATGCCCCTG CCGATGATCAGGTGCGCGCGAAGCTCAAGGCTTTAACGCCGGAAAGCGCTGATATTGCCAGCCTTGGCGGTTCGCCAGTT ACAGAAATTATTACCAGAGCGCCTGGTAATGATGCTCCCATTGGGGGTATTAAAATTTCCAGCGCAGATGGCTGGTTTGC TGTCCGCCCCTCGGGAACAGAACCCATATGCAAGGTGTATACAGAAAGTTTCAAGGGAGAAGAGCATCTTTGCGGCATAC AAAAGGACGCCATGAACTTCCTGGAGCGACTGCTGAAAGACTGA
Upstream 100 bases:
>100_bases TTCTGTGCGGAGGTAAAAGATAATCTGGTCTGAATGTCATGTCGCAGGCGTGACAATCCATAATATCTTATGGTAATTAA CAAGACAGTGGAGGTACATC
Downstream 100 bases:
>100_bases GCCTGAAAAACATAGCCTTCATGGCGCATATGTAATATAAAAAGCTCTCTTTCTACATTAGGAGAGCTTTTTATATAAAT GGTATTTCCGGTTGGAATAT
Product: phosphoglucomutase
Products: NA
Alternate protein names: PGM; Glucose phosphomutase [H]
Number of amino acids: Translated: 547; Mature: 546
Protein sequence:
>547_residues MPVVHARAGQLPLPEDLENIPALVSAYFTEYPNPAIPAQRVSFGTSGHRGSSQLHTFNEEHIYAITQAVCDYRKVKGIDG PLFLGGDTHALSEAAFRSALEVLVANDVHVRIAPRGIYTATPAISHAILRWNAGRSKGLADGIVITPSHNPPRDGGFKYN PPHGGPAETDVTDRIEKGANAYLENGNRGVHLTHLRAAQSSSLVEEYNFIRTYVDDLPNVLDVKAIAASGLRLGVDPLGG ASLQMWEPIADAYGIEITVVNKAVDPTFRFVPFDKDGKIRMDCSSPYAMNGLLEMRDRFDLAVACDPDSDRHGIVTGQGL MNPNHFLSVAAWYLFRTRRSWSSASGIGKTLVTSALLDRVGQEANRPVVEVPVGFKWFVPYLLNGHCGMGCEESAGASFL RFDGSPWSTDKDGPLMCLLAAEMLAVEQSSPAELYEKLTERLGCPVYQRLDAPADDQVRAKLKALTPESADIASLGGSPV TEIITRAPGNDAPIGGIKISSADGWFAVRPSGTEPICKVYTESFKGEEHLCGIQKDAMNFLERLLKD
Sequences:
>Translated_547_residues MPVVHARAGQLPLPEDLENIPALVSAYFTEYPNPAIPAQRVSFGTSGHRGSSQLHTFNEEHIYAITQAVCDYRKVKGIDG PLFLGGDTHALSEAAFRSALEVLVANDVHVRIAPRGIYTATPAISHAILRWNAGRSKGLADGIVITPSHNPPRDGGFKYN PPHGGPAETDVTDRIEKGANAYLENGNRGVHLTHLRAAQSSSLVEEYNFIRTYVDDLPNVLDVKAIAASGLRLGVDPLGG ASLQMWEPIADAYGIEITVVNKAVDPTFRFVPFDKDGKIRMDCSSPYAMNGLLEMRDRFDLAVACDPDSDRHGIVTGQGL MNPNHFLSVAAWYLFRTRRSWSSASGIGKTLVTSALLDRVGQEANRPVVEVPVGFKWFVPYLLNGHCGMGCEESAGASFL RFDGSPWSTDKDGPLMCLLAAEMLAVEQSSPAELYEKLTERLGCPVYQRLDAPADDQVRAKLKALTPESADIASLGGSPV TEIITRAPGNDAPIGGIKISSADGWFAVRPSGTEPICKVYTESFKGEEHLCGIQKDAMNFLERLLKD >Mature_546_residues PVVHARAGQLPLPEDLENIPALVSAYFTEYPNPAIPAQRVSFGTSGHRGSSQLHTFNEEHIYAITQAVCDYRKVKGIDGP LFLGGDTHALSEAAFRSALEVLVANDVHVRIAPRGIYTATPAISHAILRWNAGRSKGLADGIVITPSHNPPRDGGFKYNP PHGGPAETDVTDRIEKGANAYLENGNRGVHLTHLRAAQSSSLVEEYNFIRTYVDDLPNVLDVKAIAASGLRLGVDPLGGA SLQMWEPIADAYGIEITVVNKAVDPTFRFVPFDKDGKIRMDCSSPYAMNGLLEMRDRFDLAVACDPDSDRHGIVTGQGLM NPNHFLSVAAWYLFRTRRSWSSASGIGKTLVTSALLDRVGQEANRPVVEVPVGFKWFVPYLLNGHCGMGCEESAGASFLR FDGSPWSTDKDGPLMCLLAAEMLAVEQSSPAELYEKLTERLGCPVYQRLDAPADDQVRAKLKALTPESADIASLGGSPVT EIITRAPGNDAPIGGIKISSADGWFAVRPSGTEPICKVYTESFKGEEHLCGIQKDAMNFLERLLKD
Specific function: This enzyme participates in both the breakdown and synthesis of glucose [H]
COG id: COG0033
COG function: function code G; Phosphoglucomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI133922562, Length=531, Percent_Identity=24.4821092278719, Blast_Score=93, Evalue=7e-19, Organism=Homo sapiens, GI290463102, Length=434, Percent_Identity=26.2672811059908, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI21361621, Length=434, Percent_Identity=26.036866359447, Blast_Score=82, Evalue=1e-15, Organism=Escherichia coli, GI1786904, Length=544, Percent_Identity=53.6764705882353, Blast_Score=576, Evalue=1e-165, Organism=Caenorhabditis elegans, GI17535441, Length=452, Percent_Identity=28.0973451327434, Blast_Score=101, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6322722, Length=525, Percent_Identity=25.1428571428571, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6323752, Length=455, Percent_Identity=23.7362637362637, Blast_Score=79, Evalue=1e-15, Organism=Drosophila melanogaster, GI17864244, Length=395, Percent_Identity=26.3291139240506, Blast_Score=79, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005852 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 59282; Mature: 59150
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVVHARAGQLPLPEDLENIPALVSAYFTEYPNPAIPAQRVSFGTSGHRGSSQLHTFNEE CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHEECCCCCCCCCCCCCCCCCC HIYAITQAVCDYRKVKGIDGPLFLGGDTHALSEAAFRSALEVLVANDVHVRIAPRGIYTA HHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEC TPAISHAILRWNAGRSKGLADGIVITPSHNPPRDGGFKYNPPHGGPAETDVTDRIEKGAN CHHHHHHHEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCH AYLENGNRGVHLTHLRAAQSSSLVEEYNFIRTYVDDLPNVLDVKAIAASGLRLGVDPLGG HHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEECCCCCCC ASLQMWEPIADAYGIEITVVNKAVDPTFRFVPFDKDGKIRMDCSSPYAMNGLLEMRDRFD CCHHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCCCEEEECCCCHHHHHHHHHHCCCC LAVACDPDSDRHGIVTGQGLMNPNHFLSVAAWYLFRTRRSWSSASGIGKTLVTSALLDRV EEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH GQEANRPVVEVPVGFKWFVPYLLNGHCGMGCEESAGASFLRFDGSPWSTDKDGPLMCLLA HHHHCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEHHHH AEMLAVEQSSPAELYEKLTERLGCPVYQRLDAPADDQVRAKLKALTPESADIASLGGSPV HHHHHHCCCCHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHCCCCCCCHHHCCCCHH TEIITRAPGNDAPIGGIKISSADGWFAVRPSGTEPICKVYTESFKGEEHLCGIQKDAMNF HHHHHCCCCCCCCCCCEEEECCCCEEEECCCCCCHHHHHHHHHCCCCHHHCCCHHHHHHH LERLLKD HHHHHCC >Mature Secondary Structure PVVHARAGQLPLPEDLENIPALVSAYFTEYPNPAIPAQRVSFGTSGHRGSSQLHTFNEE CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHEECCCCCCCCCCCCCCCCCC HIYAITQAVCDYRKVKGIDGPLFLGGDTHALSEAAFRSALEVLVANDVHVRIAPRGIYTA HHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEC TPAISHAILRWNAGRSKGLADGIVITPSHNPPRDGGFKYNPPHGGPAETDVTDRIEKGAN CHHHHHHHEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCH AYLENGNRGVHLTHLRAAQSSSLVEEYNFIRTYVDDLPNVLDVKAIAASGLRLGVDPLGG HHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEECCCCCCC ASLQMWEPIADAYGIEITVVNKAVDPTFRFVPFDKDGKIRMDCSSPYAMNGLLEMRDRFD CCHHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCCCEEEECCCCHHHHHHHHHHCCCC LAVACDPDSDRHGIVTGQGLMNPNHFLSVAAWYLFRTRRSWSSASGIGKTLVTSALLDRV EEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH GQEANRPVVEVPVGFKWFVPYLLNGHCGMGCEESAGASFLRFDGSPWSTDKDGPLMCLLA HHHHCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEHHHH AEMLAVEQSSPAELYEKLTERLGCPVYQRLDAPADDQVRAKLKALTPESADIASLGGSPV HHHHHHCCCCHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHCCCCCCCHHHCCCCHH TEIITRAPGNDAPIGGIKISSADGWFAVRPSGTEPICKVYTESFKGEEHLCGIQKDAMNF HHHHHCCCCCCCCCCCEEEECCCCEEEECCCCCCHHHHHHHHHCCCCHHHCCCHHHHHHH LERLLKD HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8025683 [H]