| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904449
Identifier: 220904449
GI number: 220904449
Start: 1386629
End: 1386967
Strand: Reverse
Name: 220904449
Synonym: Ddes_1179
Alternate gene names: NA
Gene position: 1386967-1386629 (Counterclockwise)
Preceding gene: 220904450
Following gene: 220904444
Centisome position: 48.27
GC content: 59.29
Gene sequence:
>339_bases ATGCCCGCCGCCTCGCTGCATACTGCCGCCTGCCTGCATAAAATAATCCCGAGGCAATTAACGCTTGAAGTTCCCGCCCT GTTTTCGTTTGGACCGGTCACCCGGTGGGCGGCAAAAGAAGTCTGCCAGGACCTGTCCCCCTCCGAAGCCCTTTTTGCAC TCTTTCTGGAGAGCCTCCCTGGATTTTTAATTATCATGCAGCCGGCGAGGGCTGCGGGGCTTCTTCTCTTCGTCCGGCTC TCTCTCCACGCCGCCACTGCCACCAGCGATACCGGCCCGTGCTGGATAATGGGAATCACGTACGGGCCAGCCCGTTGTAT TGTAACCGCCTCGGGCTAG
Upstream 100 bases:
>100_bases GTCGCAAGCGCTGCAAATCAAGACAGAGCCAACGACCAGAAACCTGTCAATCATACCGGTAACATCGTGCCTAACTCCGT TTTCCCCGGGTACAGCTTTC
Downstream 100 bases:
>100_bases CCAAAGACTGTTCAAGAATTATCTGCCCTAATACAGGTCGGAATCCGCTGGCAATCGTTCCCAGTAAATACGTCCTTTTT TGCGATATTTCCGCAGTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MPAASLHTAACLHKIIPRQLTLEVPALFSFGPVTRWAAKEVCQDLSPSEALFALFLESLPGFLIIMQPARAAGLLLFVRL SLHAATATSDTGPCWIMGITYGPARCIVTASG
Sequences:
>Translated_112_residues MPAASLHTAACLHKIIPRQLTLEVPALFSFGPVTRWAAKEVCQDLSPSEALFALFLESLPGFLIIMQPARAAGLLLFVRL SLHAATATSDTGPCWIMGITYGPARCIVTASG >Mature_111_residues PAASLHTAACLHKIIPRQLTLEVPALFSFGPVTRWAAKEVCQDLSPSEALFALFLESLPGFLIIMQPARAAGLLLFVRLS LHAATATSDTGPCWIMGITYGPARCIVTASG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11908; Mature: 11777
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAASLHTAACLHKIIPRQLTLEVPALFSFGPVTRWAAKEVCQDLSPSEALFALFLESLP CCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCC GFLIIMQPARAAGLLLFVRLSLHAATATSDTGPCWIMGITYGPARCIVTASG CEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEECC >Mature Secondary Structure PAASLHTAACLHKIIPRQLTLEVPALFSFGPVTRWAAKEVCQDLSPSEALFALFLESLP CCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCC GFLIIMQPARAAGLLLFVRLSLHAATATSDTGPCWIMGITYGPARCIVTASG CEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA