| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904444
Identifier: 220904444
GI number: 220904444
Start: 1383219
End: 1383764
Strand: Reverse
Name: 220904444
Synonym: Ddes_1174
Alternate gene names: NA
Gene position: 1383764-1383219 (Counterclockwise)
Preceding gene: 220904449
Following gene: 220904440
Centisome position: 48.16
GC content: 56.41
Gene sequence:
>546_bases ATGCGCCACACTTGCCCCGTGGGTATACTCATGAAAACGATTCCTTACACCGGCCTGAAAAATCCTGCCCACAGCCTTGA GGTGGTGGACAATGAAAACAGACCATTATGCATAATGCCTGACGAAGACGTCATCCGCCAGCGCCTGCCGCATCGCGCGG TGGCCTTGCTTGTGAGCGATAGAAACGGCCAAGCCCTGCTGACACGGAGCAGTCAGGGCTGGTGTTTTTCATCTCATGGC CGCGTACCAGCAGGCATGGCGTGTGAATACCGCGTCCGGGAAATTTTGCTCAACGACTGGGGCCATGAGGGAAAACAGAT TTCCGCCCTTGGACTCATCGCCCCAGGCCTTGAAAATGCCATGACCTTCTTACATCTGTTTACGGCCAGACTGCCGCGCA CCATCATTGCCGCCAAGGCCGCCGACCGGGACCGGCACCTGCTGGTGGACCGGGATGAACTCAAGGGGCTGGGTACGCAC TTTGCTGACCTTCTTTCTCCCCTTATGCGCACTGCCATACAAAGACAGTATCTTTTCCCTGCATGA
Upstream 100 bases:
>100_bases CCCGAAGGCGGCGCGACATTGCTCTTCAGACCAGGGCAGAGTAAAACACTCCCGCTCAATGGCGGCCATTTCCACCGCAT GCCGCGCATCGAGCCGCAAC
Downstream 100 bases:
>100_bases CTACTCCACCCACCCCGCTCCTGGGAGATGTCCACAGGGTATCTATCAAAAGTCCTCAGTTGGTAGAGCTTAGCAAGTCC ACGGCCAGAGCGTGCAGGCG
Product: NUDIX hydrolase
Products: NA
Alternate protein names: NUDIX Hydrolase
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MRHTCPVGILMKTIPYTGLKNPAHSLEVVDNENRPLCIMPDEDVIRQRLPHRAVALLVSDRNGQALLTRSSQGWCFSSHG RVPAGMACEYRVREILLNDWGHEGKQISALGLIAPGLENAMTFLHLFTARLPRTIIAAKAADRDRHLLVDRDELKGLGTH FADLLSPLMRTAIQRQYLFPA
Sequences:
>Translated_181_residues MRHTCPVGILMKTIPYTGLKNPAHSLEVVDNENRPLCIMPDEDVIRQRLPHRAVALLVSDRNGQALLTRSSQGWCFSSHG RVPAGMACEYRVREILLNDWGHEGKQISALGLIAPGLENAMTFLHLFTARLPRTIIAAKAADRDRHLLVDRDELKGLGTH FADLLSPLMRTAIQRQYLFPA >Mature_181_residues MRHTCPVGILMKTIPYTGLKNPAHSLEVVDNENRPLCIMPDEDVIRQRLPHRAVALLVSDRNGQALLTRSSQGWCFSSHG RVPAGMACEYRVREILLNDWGHEGKQISALGLIAPGLENAMTFLHLFTARLPRTIIAAKAADRDRHLLVDRDELKGLGTH FADLLSPLMRTAIQRQYLFPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20267; Mature: 20267
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHTCPVGILMKTIPYTGLKNPAHSLEVVDNENRPLCIMPDEDVIRQRLPHRAVALLVSD CCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEECCHHHHHHHCCCCEEEEEEEC RNGQALLTRSSQGWCFSSHGRVPAGMACEYRVREILLNDWGHEGKQISALGLIAPGLENA CCCCEEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHH MTFLHLFTARLPRTIIAAKAADRDRHLLVDRDELKGLGTHFADLLSPLMRTAIQRQYLFP HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC A C >Mature Secondary Structure MRHTCPVGILMKTIPYTGLKNPAHSLEVVDNENRPLCIMPDEDVIRQRLPHRAVALLVSD CCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEECCHHHHHHHCCCCEEEEEEEC RNGQALLTRSSQGWCFSSHGRVPAGMACEYRVREILLNDWGHEGKQISALGLIAPGLENA CCCCEEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHH MTFLHLFTARLPRTIIAAKAADRDRHLLVDRDELKGLGTHFADLLSPLMRTAIQRQYLFP HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA