Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220904444

Identifier: 220904444

GI number: 220904444

Start: 1383219

End: 1383764

Strand: Reverse

Name: 220904444

Synonym: Ddes_1174

Alternate gene names: NA

Gene position: 1383764-1383219 (Counterclockwise)

Preceding gene: 220904449

Following gene: 220904440

Centisome position: 48.16

GC content: 56.41

Gene sequence:

>546_bases
ATGCGCCACACTTGCCCCGTGGGTATACTCATGAAAACGATTCCTTACACCGGCCTGAAAAATCCTGCCCACAGCCTTGA
GGTGGTGGACAATGAAAACAGACCATTATGCATAATGCCTGACGAAGACGTCATCCGCCAGCGCCTGCCGCATCGCGCGG
TGGCCTTGCTTGTGAGCGATAGAAACGGCCAAGCCCTGCTGACACGGAGCAGTCAGGGCTGGTGTTTTTCATCTCATGGC
CGCGTACCAGCAGGCATGGCGTGTGAATACCGCGTCCGGGAAATTTTGCTCAACGACTGGGGCCATGAGGGAAAACAGAT
TTCCGCCCTTGGACTCATCGCCCCAGGCCTTGAAAATGCCATGACCTTCTTACATCTGTTTACGGCCAGACTGCCGCGCA
CCATCATTGCCGCCAAGGCCGCCGACCGGGACCGGCACCTGCTGGTGGACCGGGATGAACTCAAGGGGCTGGGTACGCAC
TTTGCTGACCTTCTTTCTCCCCTTATGCGCACTGCCATACAAAGACAGTATCTTTTCCCTGCATGA

Upstream 100 bases:

>100_bases
CCCGAAGGCGGCGCGACATTGCTCTTCAGACCAGGGCAGAGTAAAACACTCCCGCTCAATGGCGGCCATTTCCACCGCAT
GCCGCGCATCGAGCCGCAAC

Downstream 100 bases:

>100_bases
CTACTCCACCCACCCCGCTCCTGGGAGATGTCCACAGGGTATCTATCAAAAGTCCTCAGTTGGTAGAGCTTAGCAAGTCC
ACGGCCAGAGCGTGCAGGCG

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NUDIX Hydrolase

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MRHTCPVGILMKTIPYTGLKNPAHSLEVVDNENRPLCIMPDEDVIRQRLPHRAVALLVSDRNGQALLTRSSQGWCFSSHG
RVPAGMACEYRVREILLNDWGHEGKQISALGLIAPGLENAMTFLHLFTARLPRTIIAAKAADRDRHLLVDRDELKGLGTH
FADLLSPLMRTAIQRQYLFPA

Sequences:

>Translated_181_residues
MRHTCPVGILMKTIPYTGLKNPAHSLEVVDNENRPLCIMPDEDVIRQRLPHRAVALLVSDRNGQALLTRSSQGWCFSSHG
RVPAGMACEYRVREILLNDWGHEGKQISALGLIAPGLENAMTFLHLFTARLPRTIIAAKAADRDRHLLVDRDELKGLGTH
FADLLSPLMRTAIQRQYLFPA
>Mature_181_residues
MRHTCPVGILMKTIPYTGLKNPAHSLEVVDNENRPLCIMPDEDVIRQRLPHRAVALLVSDRNGQALLTRSSQGWCFSSHG
RVPAGMACEYRVREILLNDWGHEGKQISALGLIAPGLENAMTFLHLFTARLPRTIIAAKAADRDRHLLVDRDELKGLGTH
FADLLSPLMRTAIQRQYLFPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20267; Mature: 20267

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHTCPVGILMKTIPYTGLKNPAHSLEVVDNENRPLCIMPDEDVIRQRLPHRAVALLVSD
CCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEECCHHHHHHHCCCCEEEEEEEC
RNGQALLTRSSQGWCFSSHGRVPAGMACEYRVREILLNDWGHEGKQISALGLIAPGLENA
CCCCEEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHH
MTFLHLFTARLPRTIIAAKAADRDRHLLVDRDELKGLGTHFADLLSPLMRTAIQRQYLFP
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
A
C
>Mature Secondary Structure
MRHTCPVGILMKTIPYTGLKNPAHSLEVVDNENRPLCIMPDEDVIRQRLPHRAVALLVSD
CCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEECCHHHHHHHCCCCEEEEEEEC
RNGQALLTRSSQGWCFSSHGRVPAGMACEYRVREILLNDWGHEGKQISALGLIAPGLENA
CCCCEEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHH
MTFLHLFTARLPRTIIAAKAADRDRHLLVDRDELKGLGTHFADLLSPLMRTAIQRQYLFP
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA