| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is rimI [H]
Identifier: 220904445
GI number: 220904445
Start: 1383796
End: 1384206
Strand: Direct
Name: rimI [H]
Synonym: Ddes_1175
Alternate gene names: 220904445
Gene position: 1383796-1384206 (Clockwise)
Preceding gene: 220904443
Following gene: 220904446
Centisome position: 48.16
GC content: 53.53
Gene sequence:
>411_bases ATGGCCGCCATTGAGCGGGAGTGTTTTACTCTGCCCTGGTCTGAAGAGCAATGTCGCGCCGCCTTCGGGCAAAAAGCGTT TGCCGCTTTTGGCCTGGGTTGCGAGAATGACCTTGTGGGCTATATCTCCATCTACCACACCGAAGACGAGCTGGAAATAC TCAATCTGGCGGTGCGGCCCCATCTGCGACGACAGGGGCATGGTTTGCGCATCCTGCGTACTGTCTTGCGTCTGGCGCGT AAAATGGATATGCATAAAATTCTGCTTGAAGTACGGGATAGTAATACGCCAGCCATTAGCCTGTACGAACGTTGCGGCTT CAAACGCGTCGGCCTGCGCCGTAAGTATTATGCCGATACGGGTGAAGACGCCCTTATTTACCAGTGCGAGCTGAATTCCT GTCAGCTTTAA
Upstream 100 bases:
>100_bases GGCAGGATTTTTCAGGCCGGTGTAAGGAATCGTTTTCATGAGTATACCCACGGGGCAAGTGTGGCGCATGTTGCGGCTCG ATGCGCGGCATGCGGTGGAA
Downstream 100 bases:
>100_bases CGCCGCAAGGGGTATGTATGCACAAGATTATCGCTGCAAACTGGAAGATGTACAAAGACCGTACTCAGGCCGCCACAACC GCTGGCGAGCTTGCGGCCGT
Product: ribosomal-protein-alanine acetyltransferase
Products: NA
Alternate protein names: Acetylating enzyme for N-terminal of ribosomal protein S18 [H]
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MAAIERECFTLPWSEEQCRAAFGQKAFAAFGLGCENDLVGYISIYHTEDELEILNLAVRPHLRRQGHGLRILRTVLRLAR KMDMHKILLEVRDSNTPAISLYERCGFKRVGLRRKYYADTGEDALIYQCELNSCQL
Sequences:
>Translated_136_residues MAAIERECFTLPWSEEQCRAAFGQKAFAAFGLGCENDLVGYISIYHTEDELEILNLAVRPHLRRQGHGLRILRTVLRLAR KMDMHKILLEVRDSNTPAISLYERCGFKRVGLRRKYYADTGEDALIYQCELNSCQL >Mature_135_residues AAIERECFTLPWSEEQCRAAFGQKAFAAFGLGCENDLVGYISIYHTEDELEILNLAVRPHLRRQGHGLRILRTVLRLARK MDMHKILLEVRDSNTPAISLYERCGFKRVGLRRKYYADTGEDALIYQCELNSCQL
Specific function: This enzyme acetylates the N-terminal alanine of ribosomal protein S18 (Potential) [H]
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI2367381, Length=125, Percent_Identity=34.4, Blast_Score=72, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR006464 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.128 [H]
Molecular weight: Translated: 15681; Mature: 15550
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAIERECFTLPWSEEQCRAAFGQKAFAAFGLGCENDLVGYISIYHTEDELEILNLAVRP CCCCCCCEEECCCCHHHHHHHHCCHHHHHHCCCCCCCCEEEEEEEECCCHHHHHHHHHCC HLRRQGHGLRILRTVLRLARKMDMHKILLEVRDSNTPAISLYERCGFKRVGLRRKYYADT HHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEHHHHCCCHHCCCCCCCCCCC GEDALIYQCELNSCQL CCCEEEEEEECCCCCC >Mature Secondary Structure AAIERECFTLPWSEEQCRAAFGQKAFAAFGLGCENDLVGYISIYHTEDELEILNLAVRP CCCCCCEEECCCCHHHHHHHHCCHHHHHHCCCCCCCCEEEEEEEECCCHHHHHHHHHCC HLRRQGHGLRILRTVLRLARKMDMHKILLEVRDSNTPAISLYERCGFKRVGLRRKYYADT HHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEHHHHCCCHHCCCCCCCCCCC GEDALIYQCELNSCQL CCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9202461; 9384377 [H]