| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is glnA [H]
Identifier: 220904419
GI number: 220904419
Start: 1352550
End: 1354742
Strand: Direct
Name: glnA [H]
Synonym: Ddes_1149
Alternate gene names: 220904419
Gene position: 1352550-1354742 (Clockwise)
Preceding gene: 220904418
Following gene: 220904420
Centisome position: 47.07
GC content: 53.67
Gene sequence:
>2193_bases ATGAGTTCCGTCCGCAAAAAAGCTTTATTCATGGCCATTAATACCGCCCCTGTAGTCCCCGTGCACAGCGACGGGGCCAG CTGCCGCGCGGAAGACAATTTTGGCCGTTATGTTTTCGGTCTCTCGACCATGCGAAAACGTCTGCCCAAGGATGTGTACA GCAAGCTCGCCAAAACAATTCGCGATGGCGAGCGCTTGAATCCGGACATTGCCGACGTGGTGGCCAATGCCATGAAGGAT TGGGCCATAGAAAATGGGGCAACCCATTACACGCACTGGTTTCATCCGATGACGGGTCTTACGGCCGAAAAGCATGATGC CTTCCTATCCCCGACGTCCGACGGGCAGGTCATCAGCGAGTTTTCAGGCAAAATGCTTATCAGCGGCGAACCAGACGCCT CGTCATTCCCTTCGGGCGGCATCCGCTCCACCTTTGAAGCTCGCGGCTATACCGCCTGGGATCCCAGTGTGCCGGTTTTT ATTATTCCTGCACCTTATGGGGCGACACTGCACATCCCTACATATTTTTACTCGTATTCCGGCGAGGCTCTGGACCGCAA GATTCCGTTGCTGCGTTCCATCTCTGCCTTGTCCCGGCAGGCCATGCGCATACTTCGCCTTTTCGGCAACGAATCGGCGG CATACGTGCGCGCAATGGTAGGGCCGGAGCAGGAATATTTTCTTGTTGACAAAAACCTTGCGGCCTTGCGGCCCGACTTG CTGCTGACAGGACGCACTTTGCTGGGAGCACCGTCAGCCAAAGGGCAGGAGATGGAAGACCATTACTTTGGCGCCATTCC GGCCCGCGTAATGAGCTTTATGCAGGATGTGGAAAAAGAACTGCTCGCTTTGGGCATTCCTGCAAAAACAAGACACAATG AGGTAGCCCCGGGGCAGTTTGAGCTGGCTCCGGTTTACGAAGAGGCCAACATTGCCTGTGACCATAACATGCTCACAATG AACATGATGCGGCATATGGCCGCACGGCACGGCTTTATCTGCCTGCTGCATGAAAAACCCTTTGCCGGTGTAAACGGTAG CGGCAAGCATAATAACTGGTCAATGAGTGATTCTGACGGCCAGAACCTGCTCAACCCCGGAACAACGCCGCAAGATAATG CGCAGTTTCTGGTGTTTCTGGCCGCGGTGCTGCGTGCGGTACATAAGCACGGCACAGCTTTGCGGCTCGGAACCATCGGT GCGGGCAATGATCATCGGCTTGGCGCCAACGAGGCTCCTCCGGCCATTCTTTCCGTCTACCTCGGTGAGCAGCTCACCGG GGTGCTGGACGGCATCATCAGCGGACACGGTCCGAAAAGTAAAAAAAGTGGCTTTATGGAGGTGGGAGTTTCAACACTGC CGCCCTTGCCGGTGGATCTTTCCGACCGTAACCGGACTAGCCCTTTCGCATTTACGGGCAACAAGTTTGAATTCCGTTCC GTTGGCGCATCGCAGTCGGTTGCCCCGGTCAACATTGTCCTCAACGCCGCTGTTGCCTGCGCCCTGGATGACATCGCTAC CGAGCTTGAAGCGTCCATATCTGCCGGAGCCGATCTCAATGCTGCACTTCAGGAATTGCTGCCGCGCGTGTTTAAAGCGC ACATGCCGGTTGTTTTTAACGGAAACGGATATGCAGAATCGTGGAAAGCCGAAGCAGCCAGGCGCGGTTTGCCCAATCAC AACAATACGGTAACAGCTCTGGAACATTATAGTGATCCGGACGTCATGAATGTTTTTCTGCGACACGGCATACTCACAGA GCGTGAAATACTTTCGCGCCAGGAAATACTGCTTGAAAACTACTGCAAAACGATCTGCATTGAAGGAAATCTGATGCTGG ACATGCTGCGCACTTCAGTCTTGCCCCAATGTCTTGAGGCGCAATCACGCGCAGCCGATGCGGTTATCAAGACGCGCGCT GTATCAGGAGAAAATATGACTGTAGCCGAAGAAAAATATTTCAATAAATTACACACATGTATTTTCGAGCTGCAGAACAG TATGGACGATCTGGAACATGCCATTGCCAGAACAGTTACAAGCAATGGTGTTCTGGAGGAGGCCAAAGCGGCCAGAGATG GCATTCTTACTGCCATGAACGGGTGTCGTGAACATGCCGATAGCCTTGAAGGGCTTGTTGACGACACCCTGTGGGTGCTG CCCAAATATGCAGAATTGCTGTGGTCGCATTAA
Upstream 100 bases:
>100_bases GCCGTGCGCATCCGCACAGGTCAACGTGGTGATGCGGCCCTGTAGGCCGGAAATTTTAACGGCAAAGCTTCACGTATCCA GGTGATAAAGGAGAAAAGGC
Downstream 100 bases:
>100_bases AGCTGGTGAACCTCAGTATTGTTCCAAAAAAACATTGTGGAAAGGTAGATCAGCAACAGTTTTTGAAAAGTTGATGGCAG AAGCCTCATCCCGGGGGGGA
Product: glutamine synthetase catalytic subunit
Products: NA
Alternate protein names: GS; Glutamate--ammonia ligase [H]
Number of amino acids: Translated: 730; Mature: 729
Protein sequence:
>730_residues MSSVRKKALFMAINTAPVVPVHSDGASCRAEDNFGRYVFGLSTMRKRLPKDVYSKLAKTIRDGERLNPDIADVVANAMKD WAIENGATHYTHWFHPMTGLTAEKHDAFLSPTSDGQVISEFSGKMLISGEPDASSFPSGGIRSTFEARGYTAWDPSVPVF IIPAPYGATLHIPTYFYSYSGEALDRKIPLLRSISALSRQAMRILRLFGNESAAYVRAMVGPEQEYFLVDKNLAALRPDL LLTGRTLLGAPSAKGQEMEDHYFGAIPARVMSFMQDVEKELLALGIPAKTRHNEVAPGQFELAPVYEEANIACDHNMLTM NMMRHMAARHGFICLLHEKPFAGVNGSGKHNNWSMSDSDGQNLLNPGTTPQDNAQFLVFLAAVLRAVHKHGTALRLGTIG AGNDHRLGANEAPPAILSVYLGEQLTGVLDGIISGHGPKSKKSGFMEVGVSTLPPLPVDLSDRNRTSPFAFTGNKFEFRS VGASQSVAPVNIVLNAAVACALDDIATELEASISAGADLNAALQELLPRVFKAHMPVVFNGNGYAESWKAEAARRGLPNH NNTVTALEHYSDPDVMNVFLRHGILTEREILSRQEILLENYCKTICIEGNLMLDMLRTSVLPQCLEAQSRAADAVIKTRA VSGENMTVAEEKYFNKLHTCIFELQNSMDDLEHAIARTVTSNGVLEEAKAARDGILTAMNGCREHADSLEGLVDDTLWVL PKYAELLWSH
Sequences:
>Translated_730_residues MSSVRKKALFMAINTAPVVPVHSDGASCRAEDNFGRYVFGLSTMRKRLPKDVYSKLAKTIRDGERLNPDIADVVANAMKD WAIENGATHYTHWFHPMTGLTAEKHDAFLSPTSDGQVISEFSGKMLISGEPDASSFPSGGIRSTFEARGYTAWDPSVPVF IIPAPYGATLHIPTYFYSYSGEALDRKIPLLRSISALSRQAMRILRLFGNESAAYVRAMVGPEQEYFLVDKNLAALRPDL LLTGRTLLGAPSAKGQEMEDHYFGAIPARVMSFMQDVEKELLALGIPAKTRHNEVAPGQFELAPVYEEANIACDHNMLTM NMMRHMAARHGFICLLHEKPFAGVNGSGKHNNWSMSDSDGQNLLNPGTTPQDNAQFLVFLAAVLRAVHKHGTALRLGTIG AGNDHRLGANEAPPAILSVYLGEQLTGVLDGIISGHGPKSKKSGFMEVGVSTLPPLPVDLSDRNRTSPFAFTGNKFEFRS VGASQSVAPVNIVLNAAVACALDDIATELEASISAGADLNAALQELLPRVFKAHMPVVFNGNGYAESWKAEAARRGLPNH NNTVTALEHYSDPDVMNVFLRHGILTEREILSRQEILLENYCKTICIEGNLMLDMLRTSVLPQCLEAQSRAADAVIKTRA VSGENMTVAEEKYFNKLHTCIFELQNSMDDLEHAIARTVTSNGVLEEAKAARDGILTAMNGCREHADSLEGLVDDTLWVL PKYAELLWSH >Mature_729_residues SSVRKKALFMAINTAPVVPVHSDGASCRAEDNFGRYVFGLSTMRKRLPKDVYSKLAKTIRDGERLNPDIADVVANAMKDW AIENGATHYTHWFHPMTGLTAEKHDAFLSPTSDGQVISEFSGKMLISGEPDASSFPSGGIRSTFEARGYTAWDPSVPVFI IPAPYGATLHIPTYFYSYSGEALDRKIPLLRSISALSRQAMRILRLFGNESAAYVRAMVGPEQEYFLVDKNLAALRPDLL LTGRTLLGAPSAKGQEMEDHYFGAIPARVMSFMQDVEKELLALGIPAKTRHNEVAPGQFELAPVYEEANIACDHNMLTMN MMRHMAARHGFICLLHEKPFAGVNGSGKHNNWSMSDSDGQNLLNPGTTPQDNAQFLVFLAAVLRAVHKHGTALRLGTIGA GNDHRLGANEAPPAILSVYLGEQLTGVLDGIISGHGPKSKKSGFMEVGVSTLPPLPVDLSDRNRTSPFAFTGNKFEFRSV GASQSVAPVNIVLNAAVACALDDIATELEASISAGADLNAALQELLPRVFKAHMPVVFNGNGYAESWKAEAARRGLPNHN NTVTALEHYSDPDVMNVFLRHGILTEREILSRQEILLENYCKTICIEGNLMLDMLRTSVLPQCLEAQSRAADAVIKTRAV SGENMTVAEEKYFNKLHTCIFELQNSMDDLEHAIARTVTSNGVLEEAKAARDGILTAMNGCREHADSLEGLVDDTLWVLP KYAELLWSH
Specific function: Unknown
COG id: COG3968
COG function: function code R; Uncharacterized protein related to glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family. Type 3 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR022147 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF12437 GSIII_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 79790; Mature: 79659
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: PS00181 GLNA_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVRKKALFMAINTAPVVPVHSDGASCRAEDNFGRYVFGLSTMRKRLPKDVYSKLAKTI CCCHHHEEEEEEECCCCEEEEECCCCCCCCCCCCCHHEEEHHHHHHHCCHHHHHHHHHHH RDGERLNPDIADVVANAMKDWAIENGATHYTHWFHPMTGLTAEKHDAFLSPTSDGQVISE HCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHH FSGKMLISGEPDASSFPSGGIRSTFEARGYTAWDPSVPVFIIPAPYGATLHIPTYFYSYS CCCCEEEECCCCCCCCCCCCCCCHHHCCCEEECCCCCCEEEEECCCCCEEEECCEEEECC GEALDRKIPLLRSISALSRQAMRILRLFGNESAAYVRAMVGPEQEYFLVDKNLAALRPDL CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCHHHHCCCC LLTGRTLLGAPSAKGQEMEDHYFGAIPARVMSFMQDVEKELLALGIPAKTRHNEVAPGQF EEECCHHHCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE ELAPVYEEANIACDHNMLTMNMMRHMAARHGFICLLHEKPFAGVNGSGKHNNWSMSDSDG EEEEEECCCCEEECCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC QNLLNPGTTPQDNAQFLVFLAAVLRAVHKHGTALRLGTIGAGNDHRLGANEAPPAILSVY CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHH LGEQLTGVLDGIISGHGPKSKKSGFMEVGVSTLPPLPVDLSDRNRTSPFAFTGNKFEFRS HHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHCCCCCCCCCCCCCCCCEEEECCCEEEEE VGASQSVAPVNIVLNAAVACALDDIATELEASISAGADLNAALQELLPRVFKAHMPVVFN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEC GNGYAESWKAEAARRGLPNHNNTVTALEHYSDPDVMNVFLRHGILTEREILSRQEILLEN CCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH YCKTICIEGNLMLDMLRTSVLPQCLEAQSRAADAVIKTRAVSGENMTVAEEKYFNKLHTC HHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHH IFELQNSMDDLEHAIARTVTSNGVLEEAKAARDGILTAMNGCREHADSLEGLVDDTLWVL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PKYAELLWSH HHHHHHHCCC >Mature Secondary Structure SSVRKKALFMAINTAPVVPVHSDGASCRAEDNFGRYVFGLSTMRKRLPKDVYSKLAKTI CCHHHEEEEEEECCCCEEEEECCCCCCCCCCCCCHHEEEHHHHHHHCCHHHHHHHHHHH RDGERLNPDIADVVANAMKDWAIENGATHYTHWFHPMTGLTAEKHDAFLSPTSDGQVISE HCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHH FSGKMLISGEPDASSFPSGGIRSTFEARGYTAWDPSVPVFIIPAPYGATLHIPTYFYSYS CCCCEEEECCCCCCCCCCCCCCCHHHCCCEEECCCCCCEEEEECCCCCEEEECCEEEECC GEALDRKIPLLRSISALSRQAMRILRLFGNESAAYVRAMVGPEQEYFLVDKNLAALRPDL CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCHHHHCCCC LLTGRTLLGAPSAKGQEMEDHYFGAIPARVMSFMQDVEKELLALGIPAKTRHNEVAPGQF EEECCHHHCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE ELAPVYEEANIACDHNMLTMNMMRHMAARHGFICLLHEKPFAGVNGSGKHNNWSMSDSDG EEEEEECCCCEEECCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC QNLLNPGTTPQDNAQFLVFLAAVLRAVHKHGTALRLGTIGAGNDHRLGANEAPPAILSVY CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHH LGEQLTGVLDGIISGHGPKSKKSGFMEVGVSTLPPLPVDLSDRNRTSPFAFTGNKFEFRS HHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHCCCCCCCCCCCCCCCCEEEECCCEEEEE VGASQSVAPVNIVLNAAVACALDDIATELEASISAGADLNAALQELLPRVFKAHMPVVFN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEC GNGYAESWKAEAARRGLPNHNNTVTALEHYSDPDVMNVFLRHGILTEREILSRQEILLEN CCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH YCKTICIEGNLMLDMLRTSVLPQCLEAQSRAADAVIKTRAVSGENMTVAEEKYFNKLHTC HHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHH IFELQNSMDDLEHAIARTVTSNGVLEEAKAARDGILTAMNGCREHADSLEGLVDDTLWVL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PKYAELLWSH HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2576872 [H]