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The map label for this gene is yjeF [H]

Identifier: 220904413

GI number: 220904413

Start: 1344697

End: 1346358

Strand: Reverse

Name: yjeF [H]

Synonym: Ddes_1143

Alternate gene names: 220904413

Gene position: 1346358-1344697 (Counterclockwise)

Preceding gene: 220904414

Following gene: 220904412

Centisome position: 46.86

GC content: 63.06

Gene sequence:

>1662_bases
ATGCCCGCTCCTGCCTGCCCCCCACCCTTTTTCCCTCCCCTGCCCCTGCCTGAAGAAATGCGTGCCTGGGACAAGGGCGC
GGCAGACCTCGGCCTGCCCGAAATCCTGCTTATGGAAAATGCTGCGCGGGCTGCACTGCATCTCCTGCGCCGCTACTGCC
CGGACCTTGCGGGAAAAAGCATATGGCTTTTCATGGGCAGCGGCAACAACGGCGGCGATGCCGTCTGCCTTGCGCGCCAC
CTTGTTGATGCCCACGCCCGTCCTGTGGTCCTCCACGCAAAGCCCCTGCGCCACTGCAAGGGCGCGTGCGCCAGACACGT
CGCCATTGCCAGGGCTTCGGGCGTGCCTTTTTTTCCGCTACGCTGGAACAGGGGCAAGTGGCGGCTCCCCCCGGATCACC
TGCCCCATATTATTATTGACGGCATCATGGGAACGGGCTTCAGCGGTTTGCTGCGCCCACAAACACAGGCCCTTATTGAA
ACCGTCAACAGCCTTGCCCCACAGCGGCTGGTGCTGGCGCTCGATATTCCTTCAGGGCTGAATGCGCGCACGGGGCAACC
GCAACCTGAAGCTGTGCGGGCCACGGCCACCGCAAGCTTCGTCGCGGGCAAACCGGGACTGGCCCTTCCCTGCGCACGCC
CCTGGTCAGGCCGGGTGCACGTATGTGACATCGGCCTACCGTCCATAGTACGCCGCAACGCCCCCTGCTCGGCATATCTT
ATTGATGCGCGTTGCATTGGGCAACCTGGCTCTCCTGCCAGCCTGCCTGAAAACAGTTTCAAAAACACATATGGGCATGT
ACTTGTCCTTGGCGGCGCGTCAGGGTATGCCGGAGCGGCGCACTTGGCCTCCCGCGCATCCTTAAGAGCTGGAGCCGGCC
TTGTAACAGCAGCGGCCCCTGCCGGAGCAGCAGCCGACATCAGGTGCGGCTGGCCTGAAATAATGACGCTTGCCCTGAAA
GGCAGCGATCACGATTGGCCCACAAGCATTCCAGACTCCCTTGCCGCCCTGCTGCAACGCAGCAGCGCTCTGGTAGTAGG
CCCTGGCCTGGGCCGTGGCCGGGATGCCGCCGCCTTTTTACGCGCCCTGATGATGCTTCGCCGCCCTCCTACGGTTTTTG
ACGCAGACGCCCTGGCCGTAATGGCACAGGAGCGTGACCTCCTGGACGCAGTGCAGGAAGAAGACATCCTCACACCCCAC
CCCGGTGAAGCCGCCATGCTCCTGGGGCTCTCCGCCCAGGCGGTGCAGGCTGACAGATGGGCTGCGCTGGACGGACTCTG
TTCGCTCAACCGTGGAGTCAACATCCTTAAAGGAGCCGGAACTCTGGTGCGGCAAAAGGAAAGCCCTACCGGCATTTGCC
CATATGACGTGCCGCAGTTGGCCATAGGCGGTTCGGGCGATGTACTGGCAGGTTGCCTGGGCGGCCTGCTGGCCTCAAAG
CCGGGTTTCACATATAGTTCCAATCCGGAACACGCCTTTCCCGGAGGGCCGTCCCTTATCGTGGCCGGACAAGGTGTGGC
CCTGCACGCCCTGGCCGGGCGCTCACTTGCCCATCAGTGGCCCGTGCGCGGCAATACGGCCGCAGCCATCGCGGATGCCC
TGCCTCATGTTTTTCACACCATCAGCCAAGACCAGGAAGATGACCTTGCATGGCCCAGATAA

Upstream 100 bases:

>100_bases
CCCTGCAATGCGCCCGGGATCTGGGCGTGACCTCTTGCCATGTATCGATCAGCCATGACCGCTCATCTGCCGTGGCCGTG
GTAGTTCTGGAGGCGTTATA

Downstream 100 bases:

>100_bases
CTCTTGCCACCCTTGATGATACCCGCTGTTTTGCCGACCTGCTCGTGCGCGCCCTGGAAAACGCTCCCGAAGTGAAAACC
CTTTTGCTGCGCGGAGATCT

Product: carbohydrate kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 553; Mature: 552

Protein sequence:

>553_residues
MPAPACPPPFFPPLPLPEEMRAWDKGAADLGLPEILLMENAARAALHLLRRYCPDLAGKSIWLFMGSGNNGGDAVCLARH
LVDAHARPVVLHAKPLRHCKGACARHVAIARASGVPFFPLRWNRGKWRLPPDHLPHIIIDGIMGTGFSGLLRPQTQALIE
TVNSLAPQRLVLALDIPSGLNARTGQPQPEAVRATATASFVAGKPGLALPCARPWSGRVHVCDIGLPSIVRRNAPCSAYL
IDARCIGQPGSPASLPENSFKNTYGHVLVLGGASGYAGAAHLASRASLRAGAGLVTAAAPAGAAADIRCGWPEIMTLALK
GSDHDWPTSIPDSLAALLQRSSALVVGPGLGRGRDAAAFLRALMMLRRPPTVFDADALAVMAQERDLLDAVQEEDILTPH
PGEAAMLLGLSAQAVQADRWAALDGLCSLNRGVNILKGAGTLVRQKESPTGICPYDVPQLAIGGSGDVLAGCLGGLLASK
PGFTYSSNPEHAFPGGPSLIVAGQGVALHALAGRSLAHQWPVRGNTAAAIADALPHVFHTISQDQEDDLAWPR

Sequences:

>Translated_553_residues
MPAPACPPPFFPPLPLPEEMRAWDKGAADLGLPEILLMENAARAALHLLRRYCPDLAGKSIWLFMGSGNNGGDAVCLARH
LVDAHARPVVLHAKPLRHCKGACARHVAIARASGVPFFPLRWNRGKWRLPPDHLPHIIIDGIMGTGFSGLLRPQTQALIE
TVNSLAPQRLVLALDIPSGLNARTGQPQPEAVRATATASFVAGKPGLALPCARPWSGRVHVCDIGLPSIVRRNAPCSAYL
IDARCIGQPGSPASLPENSFKNTYGHVLVLGGASGYAGAAHLASRASLRAGAGLVTAAAPAGAAADIRCGWPEIMTLALK
GSDHDWPTSIPDSLAALLQRSSALVVGPGLGRGRDAAAFLRALMMLRRPPTVFDADALAVMAQERDLLDAVQEEDILTPH
PGEAAMLLGLSAQAVQADRWAALDGLCSLNRGVNILKGAGTLVRQKESPTGICPYDVPQLAIGGSGDVLAGCLGGLLASK
PGFTYSSNPEHAFPGGPSLIVAGQGVALHALAGRSLAHQWPVRGNTAAAIADALPHVFHTISQDQEDDLAWPR
>Mature_552_residues
PAPACPPPFFPPLPLPEEMRAWDKGAADLGLPEILLMENAARAALHLLRRYCPDLAGKSIWLFMGSGNNGGDAVCLARHL
VDAHARPVVLHAKPLRHCKGACARHVAIARASGVPFFPLRWNRGKWRLPPDHLPHIIIDGIMGTGFSGLLRPQTQALIET
VNSLAPQRLVLALDIPSGLNARTGQPQPEAVRATATASFVAGKPGLALPCARPWSGRVHVCDIGLPSIVRRNAPCSAYLI
DARCIGQPGSPASLPENSFKNTYGHVLVLGGASGYAGAAHLASRASLRAGAGLVTAAAPAGAAADIRCGWPEIMTLALKG
SDHDWPTSIPDSLAALLQRSSALVVGPGLGRGRDAAAFLRALMMLRRPPTVFDADALAVMAQERDLLDAVQEEDILTPHP
GEAAMLLGLSAQAVQADRWAALDGLCSLNRGVNILKGAGTLVRQKESPTGICPYDVPQLAIGGSGDVLAGCLGGLLASKP
GFTYSSNPEHAFPGGPSLIVAGQGVALHALAGRSLAHQWPVRGNTAAAIADALPHVFHTISQDQEDDLAWPR

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1790609, Length=478, Percent_Identity=33.8912133891213, Blast_Score=176, Evalue=4e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631
- InterPro:   IPR004443 [H]

Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]

EC number: NA

Molecular weight: Translated: 57870; Mature: 57739

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: PS01050 UPF0031_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAPACPPPFFPPLPLPEEMRAWDKGAADLGLPEILLMENAARAALHLLRRYCPDLAGKS
CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHCHHHCCCE
IWLFMGSGNNGGDAVCLARHLVDAHARPVVLHAKPLRHCKGACARHVAIARASGVPFFPL
EEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEE
RWNRGKWRLPPDHLPHIIIDGIMGTGFSGLLRPQTQALIETVNSLAPQRLVLALDIPSGL
EECCCCCCCCHHHCCHHEEHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCC
NARTGQPQPEAVRATATASFVAGKPGLALPCARPWSGRVHVCDIGLPSIVRRNAPCSAYL
CCCCCCCCCHHEEHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCCCEEE
IDARCIGQPGSPASLPENSFKNTYGHVLVLGGASGYAGAAHLASRASLRAGAGLVTAAAP
EEHEECCCCCCCCCCCCHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCC
AGAAADIRCGWPEIMTLALKGSDHDWPTSIPDSLAALLQRSSALVVGPGLGRGRDAAAFL
CCCCCCCCCCCHHHEEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHH
RALMMLRRPPTVFDADALAVMAQERDLLDAVQEEDILTPHPGEAAMLLGLSAQAVQADRW
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHH
AALDGLCSLNRGVNILKGAGTLVRQKESPTGICPYDVPQLAIGGSGDVLAGCLGGLLASK
HHHHHHHHHHCCCEEEECCCHHHCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCC
PGFTYSSNPEHAFPGGPSLIVAGQGVALHALAGRSLAHQWPVRGNTAAAIADALPHVFHT
CCCCCCCCCCCCCCCCCEEEEECCCEEEEEHHCCHHHHCCCCCCCHHHHHHHHHHHHHHH
ISQDQEDDLAWPR
HCCCCCCCCCCCC
>Mature Secondary Structure 
PAPACPPPFFPPLPLPEEMRAWDKGAADLGLPEILLMENAARAALHLLRRYCPDLAGKS
CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHCHHHCCCE
IWLFMGSGNNGGDAVCLARHLVDAHARPVVLHAKPLRHCKGACARHVAIARASGVPFFPL
EEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEE
RWNRGKWRLPPDHLPHIIIDGIMGTGFSGLLRPQTQALIETVNSLAPQRLVLALDIPSGL
EECCCCCCCCHHHCCHHEEHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCC
NARTGQPQPEAVRATATASFVAGKPGLALPCARPWSGRVHVCDIGLPSIVRRNAPCSAYL
CCCCCCCCCHHEEHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCCCEEE
IDARCIGQPGSPASLPENSFKNTYGHVLVLGGASGYAGAAHLASRASLRAGAGLVTAAAP
EEHEECCCCCCCCCCCCHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCC
AGAAADIRCGWPEIMTLALKGSDHDWPTSIPDSLAALLQRSSALVVGPGLGRGRDAAAFL
CCCCCCCCCCCHHHEEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHH
RALMMLRRPPTVFDADALAVMAQERDLLDAVQEEDILTPHPGEAAMLLGLSAQAVQADRW
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHH
AALDGLCSLNRGVNILKGAGTLVRQKESPTGICPYDVPQLAIGGSGDVLAGCLGGLLASK
HHHHHHHHHHCCCEEEECCCHHHCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCC
PGFTYSSNPEHAFPGGPSLIVAGQGVALHALAGRSLAHQWPVRGNTAAAIADALPHVFHT
CCCCCCCCCCCCCCCCCEEEEECCCEEEEEHHCCHHHHCCCCCCCHHHHHHHHHHHHHHH
ISQDQEDDLAWPR
HCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 7511774 [H]