Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is 220904412
Identifier: 220904412
GI number: 220904412
Start: 1344224
End: 1344709
Strand: Reverse
Name: 220904412
Synonym: Ddes_1142
Alternate gene names: NA
Gene position: 1344709-1344224 (Counterclockwise)
Preceding gene: 220904413
Following gene: 220904411
Centisome position: 46.8
GC content: 55.35
Gene sequence:
>486_bases ATGGCCCAGATAACTCTTGCCACCCTTGATGATACCCGCTGTTTTGCCGACCTGCTCGTGCGCGCCCTGGAAAACGCTCC CGAAGTGAAAACCCTTTTGCTGCGCGGAGATCTCGGCAGCGGCAAAACAACGCTGACACGCTTTATGGTTCTGGGTTTAC CCGGCGGCACAGAGGCAGAGGTCGCCAGCCCCTCTTTTACTCTGTGCAACCATTATCCCACAGTGCCGCCCGTACTGCAC TGCGACCTTTACCGCTGCCCGGGATCCTTGCCCGAAGACCTGCTGGAAGCTCTTGATAACCTGCGTACTTTAATTATAAT TGAATGGGCAGAGTTTCTGCCGGATCAGGAGCGGCCGGAAGAATATCTGGACATCGCCTTGAAGGCATGCGAAGAAGGTC ACTTATTGACGCTGCAAGCCTCCGGCTTTAAGGCCGAGGCCCTGTTGCGCCATTTGTGCGAGCAATGGACTGTAAGCAAA GTCTGA
Upstream 100 bases:
>100_bases CCCATCAGTGGCCCGTGCGCGGCAATACGGCCGCAGCCATCGCGGATGCCCTGCCTCATGTTTTTCACACCATCAGCCAA GACCAGGAAGATGACCTTGC
Downstream 100 bases:
>100_bases ACGCGACAGAACTGCGTTCGCGCAATTGGCCTGTTGTACACTGTGAAGGATTGTGGGCAATGGATACAGGCATGAAAATT TTGGTGCAAAAGTTTGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MAQITLATLDDTRCFADLLVRALENAPEVKTLLLRGDLGSGKTTLTRFMVLGLPGGTEAEVASPSFTLCNHYPTVPPVLH CDLYRCPGSLPEDLLEALDNLRTLIIIEWAEFLPDQERPEEYLDIALKACEEGHLLTLQASGFKAEALLRHLCEQWTVSK V
Sequences:
>Translated_161_residues MAQITLATLDDTRCFADLLVRALENAPEVKTLLLRGDLGSGKTTLTRFMVLGLPGGTEAEVASPSFTLCNHYPTVPPVLH CDLYRCPGSLPEDLLEALDNLRTLIIIEWAEFLPDQERPEEYLDIALKACEEGHLLTLQASGFKAEALLRHLCEQWTVSK V >Mature_160_residues AQITLATLDDTRCFADLLVRALENAPEVKTLLLRGDLGSGKTTLTRFMVLGLPGGTEAEVASPSFTLCNHYPTVPPVLHC DLYRCPGSLPEDLLEALDNLRTLIIIEWAEFLPDQERPEEYLDIALKACEEGHLLTLQASGFKAEALLRHLCEQWTVSKV
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17834; Mature: 17703
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQITLATLDDTRCFADLLVRALENAPEVKTLLLRGDLGSGKTTLTRFMVLGLPGGTEAE CCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHEECCCCCCCC VASPSFTLCNHYPTVPPVLHCDLYRCPGSLPEDLLEALDNLRTLIIIEWAEFLPDQERPE CCCCCEEECCCCCCCCCCEECHHHCCCCCCHHHHHHHHHHHHEEEEEEHHHHCCCCCCHH EYLDIALKACEEGHLLTLQASGFKAEALLRHLCEQWTVSKV HHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure AQITLATLDDTRCFADLLVRALENAPEVKTLLLRGDLGSGKTTLTRFMVLGLPGGTEAE CEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHEECCCCCCCC VASPSFTLCNHYPTVPPVLHCDLYRCPGSLPEDLLEALDNLRTLIIIEWAEFLPDQERPE CCCCCEEECCCCCCCCCCEECHHHCCCCCCHHHHHHHHHHHHEEEEEEHHHHCCCCCCHH EYLDIALKACEEGHLLTLQASGFKAEALLRHLCEQWTVSKV HHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA