Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is pyk2 [H]
Identifier: 220904374
GI number: 220904374
Start: 1293966
End: 1295384
Strand: Reverse
Name: pyk2 [H]
Synonym: Ddes_1103
Alternate gene names: 220904374
Gene position: 1295384-1293966 (Counterclockwise)
Preceding gene: 220904391
Following gene: 220904373
Centisome position: 45.08
GC content: 57.51
Gene sequence:
>1419_bases ATGAGAACCAAAATTGTCGCCACCATCGGCCCCGCTTCCAACAGCAGGGAAAAACTGCACGAGCTTGCAGAGGCTGGCGT AAGCGTTTTCCGTCTCAACTTCTCACATGGCGCTGCTGCCGACTTTGTGAACATCATAAAAAACATCCGGGAAGTAGAGC AGTCTCTTGGGCGGCCTATCACTATTATGCAGGACCTTTCCGGGCCAAAAATTCGCTTGGGCGTGGTTCCCGAGGGGACG ATAGAAGTAGAAAAAGGCATGCGCCTGCTGCTTGGCCCAAGCCAGTCACGCGTAGATGAAATGGCCTACCTGCCTTTTGA TCATGAAGAAATCCTTGAAAGCCTGGAACCCGGCGACCGCCTTGTTCTGGCCGATGGCGGCCTTCAGTTCATCGTGCAGG CGCGCAGGGCCGACGACCTTGTGCTGCTGGAAGCCGACAACAGCGGCATTGTTACCTCGCGCAAGGGCCTCGCCCTGCCC GGCAAGGCCACAAAGGTACGCGCCCTGACAGACAAGGACAAAAAAGACCTCGCAGACGGACTCAAGCTTGGCGTGGACGC AGTGGCGATTTCCTACGTTCAGACGGCCGATGATGTACGCGAAGCCAAGGAGCTGATCGCCGCTGCCGGGCAGAACCTGC CTGTGGTGGTCAAGCTGGAACGCCAGAGCGCTGTTGACAATCTTGCAGAAATTCTGGCGGAAACAGATGTGGTTATGGTG GCCCGCGGCGATCTTGGCGTGGAATGCCCCCTGCCCTTGCTGCCTGCCCTGCAAAAACGCATTATCAGCGCCTGCAACAA GGCCTCAAAGCCTGTTATCGTCGCTACGCAGATGCTGCTTTCTATGGTCAACAGCCCCGCTCCCACGAGAGCGGAAACCA CAGACGTGGCTAACGCCGTACTGGACGGGGCCGACTGCGTGATGCTTTCTGAAGAAACCGCCATGGGCAATTTCCCCGTA GACACAGTACGCTATATGAGGCGCATCACCGATGAAGCTGAAAAGCTGCTGCTGCTCAACCACAATCTTGAAGAGCCCGA TGCCGACAAGGGCATACCGGAGTTTCTGGCTTACTCAGCTTGCCTGCTGGCCAACAAGGCCGGAGCCAAGGCCATCGTGT CTCACAGCCTTTCCGGCAGTTCCGCGCGCCAGGTTTCCGCCCGACGTCCTCCGCAGCAGATATACGCCCTTACCCCGGAT CCGGTGACCGTCAAGGCGCTCAACTTTGTCTGGGGCGTCAAGCCGGTTTTCATCGACCGCCCGCAGGAAGAACCCAGCCA CCTCATCCGGGCCGAACAGTTCATTCATGACAGCGAAGATTTCGTGGCTGATGATTGCGCCGTTATCACGGCCGGCCAGG TTAAAGGGTCTTCCTCCACCCCCCGGGGTACCAACCTTGTCAAAATTTACTGGAAATAG
Upstream 100 bases:
>100_bases ATACGTGCGAAAATCAAGATGATTTTTTGTGCTGGTCACTTGCCCTTTTCTTGCGTCCATACGCCGGACCAGCTTCTTGC CCTCTAAACAAGGACACATC
Downstream 100 bases:
>100_bases CCCATGGCCGAGCAAGCACGGAAAGCACGAGAGATTCCCCAGAACATCAATGAGGAATATTATCAGATAAGCAGCGAGAT ACTTTCAAGCTTTCCCAAGT
Product: pyruvate kinase
Products: NA
Alternate protein names: PK 2 [H]
Number of amino acids: Translated: 472; Mature: 472
Protein sequence:
>472_residues MRTKIVATIGPASNSREKLHELAEAGVSVFRLNFSHGAAADFVNIIKNIREVEQSLGRPITIMQDLSGPKIRLGVVPEGT IEVEKGMRLLLGPSQSRVDEMAYLPFDHEEILESLEPGDRLVLADGGLQFIVQARRADDLVLLEADNSGIVTSRKGLALP GKATKVRALTDKDKKDLADGLKLGVDAVAISYVQTADDVREAKELIAAAGQNLPVVVKLERQSAVDNLAEILAETDVVMV ARGDLGVECPLPLLPALQKRIISACNKASKPVIVATQMLLSMVNSPAPTRAETTDVANAVLDGADCVMLSEETAMGNFPV DTVRYMRRITDEAEKLLLLNHNLEEPDADKGIPEFLAYSACLLANKAGAKAIVSHSLSGSSARQVSARRPPQQIYALTPD PVTVKALNFVWGVKPVFIDRPQEEPSHLIRAEQFIHDSEDFVADDCAVITAGQVKGSSSTPRGTNLVKIYWK
Sequences:
>Translated_472_residues MRTKIVATIGPASNSREKLHELAEAGVSVFRLNFSHGAAADFVNIIKNIREVEQSLGRPITIMQDLSGPKIRLGVVPEGT IEVEKGMRLLLGPSQSRVDEMAYLPFDHEEILESLEPGDRLVLADGGLQFIVQARRADDLVLLEADNSGIVTSRKGLALP GKATKVRALTDKDKKDLADGLKLGVDAVAISYVQTADDVREAKELIAAAGQNLPVVVKLERQSAVDNLAEILAETDVVMV ARGDLGVECPLPLLPALQKRIISACNKASKPVIVATQMLLSMVNSPAPTRAETTDVANAVLDGADCVMLSEETAMGNFPV DTVRYMRRITDEAEKLLLLNHNLEEPDADKGIPEFLAYSACLLANKAGAKAIVSHSLSGSSARQVSARRPPQQIYALTPD PVTVKALNFVWGVKPVFIDRPQEEPSHLIRAEQFIHDSEDFVADDCAVITAGQVKGSSSTPRGTNLVKIYWK >Mature_472_residues MRTKIVATIGPASNSREKLHELAEAGVSVFRLNFSHGAAADFVNIIKNIREVEQSLGRPITIMQDLSGPKIRLGVVPEGT IEVEKGMRLLLGPSQSRVDEMAYLPFDHEEILESLEPGDRLVLADGGLQFIVQARRADDLVLLEADNSGIVTSRKGLALP GKATKVRALTDKDKKDLADGLKLGVDAVAISYVQTADDVREAKELIAAAGQNLPVVVKLERQSAVDNLAEILAETDVVMV ARGDLGVECPLPLLPALQKRIISACNKASKPVIVATQMLLSMVNSPAPTRAETTDVANAVLDGADCVMLSEETAMGNFPV DTVRYMRRITDEAEKLLLLNHNLEEPDADKGIPEFLAYSACLLANKAGAKAIVSHSLSGSSARQVSARRPPQQIYALTPD PVTVKALNFVWGVKPVFIDRPQEEPSHLIRAEQFIHDSEDFVADDCAVITAGQVKGSSSTPRGTNLVKIYWK
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PEP- utilizing enzyme family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=438, Percent_Identity=39.9543378995434, Blast_Score=286, Evalue=4e-77, Organism=Homo sapiens, GI33286420, Length=438, Percent_Identity=39.9543378995434, Blast_Score=286, Evalue=4e-77, Organism=Homo sapiens, GI33286418, Length=438, Percent_Identity=40.4109589041096, Blast_Score=282, Evalue=5e-76, Organism=Homo sapiens, GI10835121, Length=436, Percent_Identity=38.5321100917431, Blast_Score=275, Evalue=5e-74, Organism=Homo sapiens, GI32967597, Length=436, Percent_Identity=38.5321100917431, Blast_Score=275, Evalue=6e-74, Organism=Homo sapiens, GI310128732, Length=287, Percent_Identity=39.3728222996516, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI310128730, Length=287, Percent_Identity=39.3728222996516, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI310128736, Length=235, Percent_Identity=37.0212765957447, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI310128734, Length=235, Percent_Identity=37.0212765957447, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI310128738, Length=216, Percent_Identity=34.7222222222222, Blast_Score=115, Evalue=8e-26, Organism=Escherichia coli, GI1788160, Length=473, Percent_Identity=36.1522198731501, Blast_Score=256, Evalue=1e-69, Organism=Escherichia coli, GI1787965, Length=421, Percent_Identity=37.7672209026128, Blast_Score=249, Evalue=3e-67, Organism=Caenorhabditis elegans, GI17544584, Length=424, Percent_Identity=36.3207547169811, Blast_Score=273, Evalue=1e-73, Organism=Caenorhabditis elegans, GI71984413, Length=482, Percent_Identity=37.9668049792531, Blast_Score=267, Evalue=1e-71, Organism=Caenorhabditis elegans, GI17506829, Length=482, Percent_Identity=37.9668049792531, Blast_Score=267, Evalue=1e-71, Organism=Caenorhabditis elegans, GI71984406, Length=482, Percent_Identity=37.9668049792531, Blast_Score=266, Evalue=1e-71, Organism=Caenorhabditis elegans, GI17506831, Length=482, Percent_Identity=37.9668049792531, Blast_Score=266, Evalue=2e-71, Organism=Saccharomyces cerevisiae, GI6319279, Length=427, Percent_Identity=38.8758782201405, Blast_Score=264, Evalue=3e-71, Organism=Saccharomyces cerevisiae, GI6324923, Length=430, Percent_Identity=38.1395348837209, Blast_Score=254, Evalue=2e-68, Organism=Drosophila melanogaster, GI24648964, Length=433, Percent_Identity=39.9538106235566, Blast_Score=270, Evalue=2e-72, Organism=Drosophila melanogaster, GI28571814, Length=433, Percent_Identity=39.9538106235566, Blast_Score=270, Evalue=2e-72, Organism=Drosophila melanogaster, GI24648966, Length=410, Percent_Identity=34.6341463414634, Blast_Score=228, Evalue=7e-60, Organism=Drosophila melanogaster, GI24581235, Length=427, Percent_Identity=33.0210772833724, Blast_Score=206, Evalue=3e-53, Organism=Drosophila melanogaster, GI24646914, Length=318, Percent_Identity=35.2201257861635, Blast_Score=158, Evalue=7e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008279 - InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 50986; Mature: 50986
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTKIVATIGPASNSREKLHELAEAGVSVFRLNFSHGAAADFVNIIKNIREVEQSLGRPI CCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCE TIMQDLSGPKIRLGVVPEGTIEVEKGMRLLLGPSQSRVDEMAYLPFDHEEILESLEPGDR EEEECCCCCEEEEEECCCCCEECCCCCEEEECCCHHHHHHHEECCCCHHHHHHHCCCCCE LVLADGGLQFIVQARRADDLVLLEADNSGIVTSRKGLALPGKATKVRALTDKDKKDLADG EEEECCCCEEHHHHCCCCCEEEEEECCCCCEECCCCCCCCCCCCEEEEECCCCHHHHHHH LKLGVDAVAISYVQTADDVREAKELIAAAGQNLPVVVKLERQSAVDNLAEILAETDVVMV HHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHCCCEEEE ARGDLGVECPLPLLPALQKRIISACNKASKPVIVATQMLLSMVNSPAPTRAETTDVANAV EECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH LDGADCVMLSEETAMGNFPVDTVRYMRRITDEAEKLLLLNHNLEEPDADKGIPEFLAYSA HCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHH CLLANKAGAKAIVSHSLSGSSARQVSARRPPQQIYALTPDPVTVKALNFVWGVKPVFIDR HHHHCCCCCHHHHHHCCCCCCHHHHHCCCCHHHEEEECCCCEEEEEEHHHHCCCEEEECC PQEEPSHLIRAEQFIHDSEDFVADDCAVITAGQVKGSSSTPRGTNLVKIYWK CCCCHHHHHHHHHHHCCCCHHHCCCCEEEEECCCCCCCCCCCCCCEEEEEEC >Mature Secondary Structure MRTKIVATIGPASNSREKLHELAEAGVSVFRLNFSHGAAADFVNIIKNIREVEQSLGRPI CCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCE TIMQDLSGPKIRLGVVPEGTIEVEKGMRLLLGPSQSRVDEMAYLPFDHEEILESLEPGDR EEEECCCCCEEEEEECCCCCEECCCCCEEEECCCHHHHHHHEECCCCHHHHHHHCCCCCE LVLADGGLQFIVQARRADDLVLLEADNSGIVTSRKGLALPGKATKVRALTDKDKKDLADG EEEECCCCEEHHHHCCCCCEEEEEECCCCCEECCCCCCCCCCCCEEEEECCCCHHHHHHH LKLGVDAVAISYVQTADDVREAKELIAAAGQNLPVVVKLERQSAVDNLAEILAETDVVMV HHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHCCCEEEE ARGDLGVECPLPLLPALQKRIISACNKASKPVIVATQMLLSMVNSPAPTRAETTDVANAV EECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH LDGADCVMLSEETAMGNFPVDTVRYMRRITDEAEKLLLLNHNLEEPDADKGIPEFLAYSA HCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHH CLLANKAGAKAIVSHSLSGSSARQVSARRPPQQIYALTPDPVTVKALNFVWGVKPVFIDR HHHHCCCCCHHHHHHCCCCCCHHHHHCCCCHHHEEEECCCCEEEEEEHHHHCCCEEEECC PQEEPSHLIRAEQFIHDSEDFVADDCAVITAGQVKGSSSTPRGTNLVKIYWK CCCCHHHHHHHHHHHCCCCHHHCCCCEEEEECCCCCCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]