Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is 220904373
Identifier: 220904373
GI number: 220904373
Start: 1292919
End: 1293962
Strand: Reverse
Name: 220904373
Synonym: Ddes_1102
Alternate gene names: NA
Gene position: 1293962-1292919 (Counterclockwise)
Preceding gene: 220904374
Following gene: 220904367
Centisome position: 45.03
GC content: 54.79
Gene sequence:
>1044_bases ATGGCCGAGCAAGCACGGAAAGCACGAGAGATTCCCCAGAACATCAATGAGGAATATTATCAGATAAGCAGCGAGATACT TTCAAGCTTTCCCAAGTACCGGCCTCCTGTGGATCTTTTCAGCTTTCGTGAAGACATCATGGTGCTCGCTCCTTATTGCA AAAAAGAGACGCGCCTGACAAACGAGCAAGTTGAAGAGCTGGCGGCGCTGTGCGCCGAGGGCAATCTTTTTGTGTCGCGC TCTGACCACCACATCTATTCGCGCCACATTGTCAAACAGCTCGACCTTGTTTTACAGGATAAAAATCTCAAGGAAGCTGA GATTGCGGATATCTGCATCCGCGCGCTCTTTATCCGCTACACAGAGTTTCTCAGCCAGCCCGTCAAACCCCTGCTGGAAC CGCTGTACCGTGACGTTATGGTGATCACGGAATACCTCTGGGCAGACAAGCACCGCATCAACACTTTCATGCGCCGCCTG TTCCGCAAACACCAGTTGGCCCGGCACTCCATCAACAGCATGAGCGTGGGCCTCTGGCTGTGGCTGCAGGTAAGCGGAGA ATACCGCCGCAAGGATCTTGACCGTGCTGCCTTGGCCTTTTTGCTGCATGATGTGGGCATGAGCAAGGTTCCCGCCTTTC TGCTCAGCAAACCAGGCCCGCTCAAGGCCGAGGAAAGGGAAAAGCTGCTGCCCCACCCTCTTGTGGGCGTCAAGCTTATG CACAAGATGGAAATGAGCTTTGAAGAGCTTGTGCGGGCCTGCTACGAACACCATGAACGCATGGACGGCTCAGGTTATCC CCAACGCCTCAAGGGAAACCAGATAAGCCGGGTGGGACGGATTACCGCCATCGCCGATTCCTTTTCGGCCATGATCTGCG ACAGGCCCTACAGCGAACGCAAGGATCCTCTTGAAGCTGCAAAAGAGCTGGCGGGCGACCCCCGGTATGACAGCGAACTG AGCAACATGTTACTTACGGGCTTTGCGTCCGGCAACATCGGGGGCATGACGGATATGGACAGGATTGTGGACGAACCGCT GTAG
Upstream 100 bases:
>100_bases CGTGGCTGATGATTGCGCCGTTATCACGGCCGGCCAGGTTAAAGGGTCTTCCTCCACCCCCCGGGGTACCAACCTTGTCA AAATTTACTGGAAATAGCCC
Downstream 100 bases:
>100_bases GCAAAAGACGCTCCCCTGCCGGAACATGCTTTTGCATTCCGGGCCGTTAAAACACCGGAAAAACACGTCCAGCCGTCCAC GCGATTCTGAACGCACACGC
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MAEQARKAREIPQNINEEYYQISSEILSSFPKYRPPVDLFSFREDIMVLAPYCKKETRLTNEQVEELAALCAEGNLFVSR SDHHIYSRHIVKQLDLVLQDKNLKEAEIADICIRALFIRYTEFLSQPVKPLLEPLYRDVMVITEYLWADKHRINTFMRRL FRKHQLARHSINSMSVGLWLWLQVSGEYRRKDLDRAALAFLLHDVGMSKVPAFLLSKPGPLKAEEREKLLPHPLVGVKLM HKMEMSFEELVRACYEHHERMDGSGYPQRLKGNQISRVGRITAIADSFSAMICDRPYSERKDPLEAAKELAGDPRYDSEL SNMLLTGFASGNIGGMTDMDRIVDEPL
Sequences:
>Translated_347_residues MAEQARKAREIPQNINEEYYQISSEILSSFPKYRPPVDLFSFREDIMVLAPYCKKETRLTNEQVEELAALCAEGNLFVSR SDHHIYSRHIVKQLDLVLQDKNLKEAEIADICIRALFIRYTEFLSQPVKPLLEPLYRDVMVITEYLWADKHRINTFMRRL FRKHQLARHSINSMSVGLWLWLQVSGEYRRKDLDRAALAFLLHDVGMSKVPAFLLSKPGPLKAEEREKLLPHPLVGVKLM HKMEMSFEELVRACYEHHERMDGSGYPQRLKGNQISRVGRITAIADSFSAMICDRPYSERKDPLEAAKELAGDPRYDSEL SNMLLTGFASGNIGGMTDMDRIVDEPL >Mature_346_residues AEQARKAREIPQNINEEYYQISSEILSSFPKYRPPVDLFSFREDIMVLAPYCKKETRLTNEQVEELAALCAEGNLFVSRS DHHIYSRHIVKQLDLVLQDKNLKEAEIADICIRALFIRYTEFLSQPVKPLLEPLYRDVMVITEYLWADKHRINTFMRRLF RKHQLARHSINSMSVGLWLWLQVSGEYRRKDLDRAALAFLLHDVGMSKVPAFLLSKPGPLKAEEREKLLPHPLVGVKLMH KMEMSFEELVRACYEHHERMDGSGYPQRLKGNQISRVGRITAIADSFSAMICDRPYSERKDPLEAAKELAGDPRYDSELS NMLLTGFASGNIGGMTDMDRIVDEPL
Specific function: Unknown
COG id: COG2206
COG function: function code T; HD-GYP domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR000160 - InterPro: IPR003607 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40102; Mature: 39971
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQARKAREIPQNINEEYYQISSEILSSFPKYRPPVDLFSFREDIMVLAPYCKKETRLT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHCC NEQVEELAALCAEGNLFVSRSDHHIYSRHIVKQLDLVLQDKNLKEAEIADICIRALFIRY HHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH TEFLSQPVKPLLEPLYRDVMVITEYLWADKHRINTFMRRLFRKHQLARHSINSMSVGLWL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE WLQVSGEYRRKDLDRAALAFLLHDVGMSKVPAFLLSKPGPLKAEEREKLLPHPLVGVKLM EEEECCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHH HKMEMSFEELVRACYEHHERMDGSGYPQRLKGNQISRVGRITAIADSFSAMICDRPYSER HHHHCCHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC KDPLEAAKELAGDPRYDSELSNMLLTGFASGNIGGMTDMDRIVDEPL CCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCC >Mature Secondary Structure AEQARKAREIPQNINEEYYQISSEILSSFPKYRPPVDLFSFREDIMVLAPYCKKETRLT CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHCC NEQVEELAALCAEGNLFVSRSDHHIYSRHIVKQLDLVLQDKNLKEAEIADICIRALFIRY HHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH TEFLSQPVKPLLEPLYRDVMVITEYLWADKHRINTFMRRLFRKHQLARHSINSMSVGLWL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE WLQVSGEYRRKDLDRAALAFLLHDVGMSKVPAFLLSKPGPLKAEEREKLLPHPLVGVKLM EEEECCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHH HKMEMSFEELVRACYEHHERMDGSGYPQRLKGNQISRVGRITAIADSFSAMICDRPYSER HHHHCCHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC KDPLEAAKELAGDPRYDSELSNMLLTGFASGNIGGMTDMDRIVDEPL CCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]