| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904325
Identifier: 220904325
GI number: 220904325
Start: 1232624
End: 1233883
Strand: Reverse
Name: 220904325
Synonym: Ddes_1052
Alternate gene names: NA
Gene position: 1233883-1232624 (Counterclockwise)
Preceding gene: 220904327
Following gene: 220904324
Centisome position: 42.94
GC content: 60.32
Gene sequence:
>1260_bases ATGTCATGGCGCAGCACTGTCATCCTGCTTTTTGCCGCTCTTTGCCTGCTGGTTGCACCTTTGCGGCTTTCTGCCGCCGA AGTTGACTTCATGCCGCAACTGGGGTTGCGTTCCCTGCCCGAGCTTGCCTGCATGGACGAAAACTCCGCTCACTGCAACC AGGCTCTGCCCCAGACACTGCTGGTCACGTCGCCCGTAGTGGAAGACCCGGCCTGGTACTCCCCTCCCCCCGACAAAACC CATAACAAACCGCACTATGTGGGCTGCCAGGCGCCGGGCCAGTATCTGCCCATCCTGCAAGAGGCCCTTGAGGGCAATCC CGTAGCCATGGCCGACCTCATCATCCGCATTCAATGCGATCGTCCGGCACTGGCCGCCGCGCATCCGGACATCCCGGCCT TCATGCATTCCGTCCCCTTCTGGCTGGAATGGGCCGCGCGTTATACCTCCCCAGGCTGGATATATGCCCGCCTTGCCCTG TATGATGACGGCATAGGGCACACCCGTAGCGCTTATACGCGAGGCGCCTTTCTTGGCGACCCCAAATCCATGCACGCCTA CGCCACCCGCTGGAACACCGGAACCAACCTGCACTGGCTGCTCATGGCCGCGGATGCGGGCTATGGCCCGGCAGCACATG AAATCTCCCGCTGGTATCGCTTCGGCGGACAAAACAGCGGCTACAGCCTCCCCAAAGCTCCGGACACCGACATGGCACGC CGATACCGGACCATAGCCATGAACAGGGGCTATCCCCGGGCCTTCGCCTATGCCGCTTTTGAAGCGCTTGCTGAGGAAAA TGCGGGCCAGGCAGTAGAGGATGCCTGCATGTATACACATATTGGCCGTGTGCTTGAAAAGACCGACAATGGCCTTCTGC TTGCTGACAGGTCCCTGCCTCAAATGCAGCCCATCCCCTTTGAGCAGGTACTGGCGTACGCGCTCTGCGCAGTGCTGCCG CCCCGGCCGCTGCTTTCGCAGGAAGAAAAACTGCATTTTCAGGATTCGCAGAAAATCAGACGTCCCCGCGTCATTGACGA TGAAATGCAGAACAGGGCCATGGAACGAGCCTCTGCCTGGCTGCGCGCCTTTCAGGCGCAACGCCAGGCAGAGCTGGTAA TGGAGCGTGAGCGAAGGAATGCGCTGACCGCACAATTGCGTGAACAATGCAGCCATGCCCTCACATATCTCGTCAAAACG CAAGACAGCGCACCTCTGCCGCGTCCTGTTACAGCCCGCCACGCGCCGCCCTTTATCTAG
Upstream 100 bases:
>100_bases CTGCCAAAAGCCGGTCCGAAACATGGCATATGAATTCAGGCCTGCCGCGCTGTCCGGCAGGCAACGGCTTGATTCTCCTT ATGCCACAGGAGGGCGTATC
Downstream 100 bases:
>100_bases GCGCTGCAGGCAGGCATATGAGGCATCCGCGCAGAAACTGCCGGCAGAGCGCCCGTGCAGAAATACGCGCGTCTCGTGTA CTGTCCGCAATCCCAAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MSWRSTVILLFAALCLLVAPLRLSAAEVDFMPQLGLRSLPELACMDENSAHCNQALPQTLLVTSPVVEDPAWYSPPPDKT HNKPHYVGCQAPGQYLPILQEALEGNPVAMADLIIRIQCDRPALAAAHPDIPAFMHSVPFWLEWAARYTSPGWIYARLAL YDDGIGHTRSAYTRGAFLGDPKSMHAYATRWNTGTNLHWLLMAADAGYGPAAHEISRWYRFGGQNSGYSLPKAPDTDMAR RYRTIAMNRGYPRAFAYAAFEALAEENAGQAVEDACMYTHIGRVLEKTDNGLLLADRSLPQMQPIPFEQVLAYALCAVLP PRPLLSQEEKLHFQDSQKIRRPRVIDDEMQNRAMERASAWLRAFQAQRQAELVMERERRNALTAQLREQCSHALTYLVKT QDSAPLPRPVTARHAPPFI
Sequences:
>Translated_419_residues MSWRSTVILLFAALCLLVAPLRLSAAEVDFMPQLGLRSLPELACMDENSAHCNQALPQTLLVTSPVVEDPAWYSPPPDKT HNKPHYVGCQAPGQYLPILQEALEGNPVAMADLIIRIQCDRPALAAAHPDIPAFMHSVPFWLEWAARYTSPGWIYARLAL YDDGIGHTRSAYTRGAFLGDPKSMHAYATRWNTGTNLHWLLMAADAGYGPAAHEISRWYRFGGQNSGYSLPKAPDTDMAR RYRTIAMNRGYPRAFAYAAFEALAEENAGQAVEDACMYTHIGRVLEKTDNGLLLADRSLPQMQPIPFEQVLAYALCAVLP PRPLLSQEEKLHFQDSQKIRRPRVIDDEMQNRAMERASAWLRAFQAQRQAELVMERERRNALTAQLREQCSHALTYLVKT QDSAPLPRPVTARHAPPFI >Mature_418_residues SWRSTVILLFAALCLLVAPLRLSAAEVDFMPQLGLRSLPELACMDENSAHCNQALPQTLLVTSPVVEDPAWYSPPPDKTH NKPHYVGCQAPGQYLPILQEALEGNPVAMADLIIRIQCDRPALAAAHPDIPAFMHSVPFWLEWAARYTSPGWIYARLALY DDGIGHTRSAYTRGAFLGDPKSMHAYATRWNTGTNLHWLLMAADAGYGPAAHEISRWYRFGGQNSGYSLPKAPDTDMARR YRTIAMNRGYPRAFAYAAFEALAEENAGQAVEDACMYTHIGRVLEKTDNGLLLADRSLPQMQPIPFEQVLAYALCAVLPP RPLLSQEEKLHFQDSQKIRRPRVIDDEMQNRAMERASAWLRAFQAQRQAELVMERERRNALTAQLREQCSHALTYLVKTQ DSAPLPRPVTARHAPPFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47015; Mature: 46884
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWRSTVILLFAALCLLVAPLRLSAAEVDFMPQLGLRSLPELACMDENSAHCNQALPQTL CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHCCCHHHHCCCCCHHHHHHCCHHH LVTSPVVEDPAWYSPPPDKTHNKPHYVGCQAPGQYLPILQEALEGNPVAMADLIIRIQCD HHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCEEEEEEEEEEECC RPALAAAHPDIPAFMHSVPFWLEWAARYTSPGWIYARLALYDDGIGHTRSAYTRGAFLGD CCCHHCCCCCHHHHHHHCHHHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHHCCCCCCC PKSMHAYATRWNTGTNLHWLLMAADAGYGPAAHEISRWYRFGGQNSGYSLPKAPDTDMAR CHHHHHHEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH RYRTIAMNRGYPRAFAYAAFEALAEENAGQAVEDACMYTHIGRVLEKTDNGLLLADRSLP HHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC QMQPIPFEQVLAYALCAVLPPRPLLSQEEKLHFQDSQKIRRPRVIDDEMQNRAMERASAW CCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHH LRAFQAQRQAELVMERERRNALTAQLREQCSHALTYLVKTQDSAPLPRPVTARHAPPFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SWRSTVILLFAALCLLVAPLRLSAAEVDFMPQLGLRSLPELACMDENSAHCNQALPQTL CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHCCCHHHHCCCCCHHHHHHCCHHH LVTSPVVEDPAWYSPPPDKTHNKPHYVGCQAPGQYLPILQEALEGNPVAMADLIIRIQCD HHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCEEEEEEEEEEECC RPALAAAHPDIPAFMHSVPFWLEWAARYTSPGWIYARLALYDDGIGHTRSAYTRGAFLGD CCCHHCCCCCHHHHHHHCHHHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHHCCCCCCC PKSMHAYATRWNTGTNLHWLLMAADAGYGPAAHEISRWYRFGGQNSGYSLPKAPDTDMAR CHHHHHHEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH RYRTIAMNRGYPRAFAYAAFEALAEENAGQAVEDACMYTHIGRVLEKTDNGLLLADRSLP HHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC QMQPIPFEQVLAYALCAVLPPRPLLSQEEKLHFQDSQKIRRPRVIDDEMQNRAMERASAW CCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHH LRAFQAQRQAELVMERERRNALTAQLREQCSHALTYLVKTQDSAPLPRPVTARHAPPFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA