| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is hisD [H]
Identifier: 220904324
GI number: 220904324
Start: 1230940
End: 1232244
Strand: Reverse
Name: hisD [H]
Synonym: Ddes_1051
Alternate gene names: 220904324
Gene position: 1232244-1230940 (Counterclockwise)
Preceding gene: 220904325
Following gene: 220904323
Centisome position: 42.88
GC content: 60.15
Gene sequence:
>1305_bases ATGACATGCCGGACTTTGACTCTGCATAATGAGCAGGAGTGGCCCAAGCTTGCCCAATGGCTGCAAGGCCGCAATAACCC CGGTGACGGGGTGGAAAGCGCTGTGCGCGACATCATCGCTGCTGTGCGCGAAAGGGGCGACGAAGCCCTGGTGGAATATA CCCGTAATTTTGACTGCCCGGATTTTGCGCCCCCACTGCTCGTCAGCGAGCAGGAAATCGCGCGCGCGGCTGCTTCTGTT TCCATTGAAAACAGAGAAATCATCAGTCAGGCGGCCACGTACATACGCTCTTTTCATGAAGCGCAGACGGAAAAATCCTG GTTTACCACACGCCCTGACGGCAGCATTCTCGGCCAGCACGTTTTGCCCGTCGATGCTGCCGGGCTGTACGTGCCCGGCG GACAAGGCGGCAATACACCGCTTATCTCAAGCCTGCTCATGACAGCCATTCCGGCGCAGGTCGCAGGTGTGCCGCGTCTT GCCATCTGCACTCCGCCCCGCAAGGACGGCAGCGTCAACCCCCATATTCTTGCTGCGGCCCACCTGCTGGACATTGAAGA AGTATACCGCGTTGGCGGGGCCTGGTCCGTGGCGGGCATGGCCTATGGCACGCAAAGCATGGCCCCGGTAGACGTCATCG CCGGACCGGGCAACATCTTTGTCACCACAGCCAAACGCCTGGTGCAAGGCACAGTGGGTATCGACATGATCGCTGGTCCC AGCGAAGTGCTGATCCTGGCCGACTCTTCCGCCAATGCCGAATGGCTCGCAGCGGACATGCTTTCTCAGGCCGAGCACGA CACCCTGGCATCGGCAATCTGCGTTACTGACGATCAGCGCCTGGCCGACAATCTCTGGCAGGAGCTCAACAAACAGTGCG CCGCCCTGCCCAGAGCCACCACCGCAGCCCGCTCGCTTGAAGACTGGGGGGCCATTGTGGTCACGCCCAACCTGAGTGTG GCCGTAGCCGTGGCCAATATGGTCGCTCCCGAGCACCTGGAAATCTGCACTCGTGACCCTTGGGCCGTTCTGCCCCACAT CCGCCATGCCGGGGCCATTTTTATGGGCCAGCATAGCCCCGAGGCAGTGGGGGACTATTTCGCCGGTCCGAACCATGTGC TGCCCACATTGGGTACGGCCCGCTTTTCTTCTGCCCTTTCTGTGCAGACCTTTTGCAAGAGAACCAGCATCGTGGCAACG TCCCCAACCTTTTTGCAGCAAAATATGCAATCCATTGCCGCCCTTGCACGCATGGAAGGGCTGGAAGCGCACGCGCGCAG CGTTGAAGCGCGAGCCAAAAAATAA
Upstream 100 bases:
>100_bases TTAAAAAAGCGCATGCCGGTTGTTCCCCTCAAGCCGCGGCAAGTCTCGACATTCATAGGCGCCTTCTGTATATTCCCTCA ACCGAGGTGAGGAAAATACT
Downstream 100 bases:
>100_bases TCGGGCCGACACACCAGGAGCACCCATGAAGGTTGTGGTCAAAACTGACATTACCGCCTACCCGCTGCTTTCACGCGGCA AGGTGCGCGACATCTACAAC
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 434; Mature: 433
Protein sequence:
>434_residues MTCRTLTLHNEQEWPKLAQWLQGRNNPGDGVESAVRDIIAAVRERGDEALVEYTRNFDCPDFAPPLLVSEQEIARAAASV SIENREIISQAATYIRSFHEAQTEKSWFTTRPDGSILGQHVLPVDAAGLYVPGGQGGNTPLISSLLMTAIPAQVAGVPRL AICTPPRKDGSVNPHILAAAHLLDIEEVYRVGGAWSVAGMAYGTQSMAPVDVIAGPGNIFVTTAKRLVQGTVGIDMIAGP SEVLILADSSANAEWLAADMLSQAEHDTLASAICVTDDQRLADNLWQELNKQCAALPRATTAARSLEDWGAIVVTPNLSV AVAVANMVAPEHLEICTRDPWAVLPHIRHAGAIFMGQHSPEAVGDYFAGPNHVLPTLGTARFSSALSVQTFCKRTSIVAT SPTFLQQNMQSIAALARMEGLEAHARSVEARAKK
Sequences:
>Translated_434_residues MTCRTLTLHNEQEWPKLAQWLQGRNNPGDGVESAVRDIIAAVRERGDEALVEYTRNFDCPDFAPPLLVSEQEIARAAASV SIENREIISQAATYIRSFHEAQTEKSWFTTRPDGSILGQHVLPVDAAGLYVPGGQGGNTPLISSLLMTAIPAQVAGVPRL AICTPPRKDGSVNPHILAAAHLLDIEEVYRVGGAWSVAGMAYGTQSMAPVDVIAGPGNIFVTTAKRLVQGTVGIDMIAGP SEVLILADSSANAEWLAADMLSQAEHDTLASAICVTDDQRLADNLWQELNKQCAALPRATTAARSLEDWGAIVVTPNLSV AVAVANMVAPEHLEICTRDPWAVLPHIRHAGAIFMGQHSPEAVGDYFAGPNHVLPTLGTARFSSALSVQTFCKRTSIVAT SPTFLQQNMQSIAALARMEGLEAHARSVEARAKK >Mature_433_residues TCRTLTLHNEQEWPKLAQWLQGRNNPGDGVESAVRDIIAAVRERGDEALVEYTRNFDCPDFAPPLLVSEQEIARAAASVS IENREIISQAATYIRSFHEAQTEKSWFTTRPDGSILGQHVLPVDAAGLYVPGGQGGNTPLISSLLMTAIPAQVAGVPRLA ICTPPRKDGSVNPHILAAAHLLDIEEVYRVGGAWSVAGMAYGTQSMAPVDVIAGPGNIFVTTAKRLVQGTVGIDMIAGPS EVLILADSSANAEWLAADMLSQAEHDTLASAICVTDDQRLADNLWQELNKQCAALPRATTAARSLEDWGAIVVTPNLSVA VAVANMVAPEHLEICTRDPWAVLPHIRHAGAIFMGQHSPEAVGDYFAGPNHVLPTLGTARFSSALSVQTFCKRTSIVATS PTFLQQNMQSIAALARMEGLEAHARSVEARAKK
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=406, Percent_Identity=39.6551724137931, Blast_Score=265, Evalue=3e-72, Organism=Saccharomyces cerevisiae, GI6319819, Length=418, Percent_Identity=35.6459330143541, Blast_Score=234, Evalue=2e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 46428; Mature: 46297
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCRTLTLHNEQEWPKLAQWLQGRNNPGDGVESAVRDIIAAVRERGDEALVEYTRNFDCP CCCEEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC DFAPPLLVSEQEIARAAASVSIENREIISQAATYIRSFHEAQTEKSWFTTRPDGSILGQH CCCCCCEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCC VLPVDAAGLYVPGGQGGNTPLISSLLMTAIPAQVAGVPRLAICTPPRKDGSVNPHILAAA CCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHH HLLDIEEVYRVGGAWSVAGMAYGTQSMAPVDVIAGPGNIFVTTAKRLVQGTVGIDMIAGP HHHHHHHHHHCCCCEEEHHHHCCCCCCCCEEEEECCCCEEEEEHHHHHHHCCCEEEECCC SEVLILADSSANAEWLAADMLSQAEHDTLASAICVTDDQRLADNLWQELNKQCAALPRAT CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHCCCHH TAARSLEDWGAIVVTPNLSVAVAVANMVAPEHLEICTRDPWAVLPHIRHAGAIFMGQHSP HHHHHHHHCCEEEECCCCHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCEEEECCCCC EAVGDYFAGPNHVLPTLGTARFSSALSVQTFCKRTSIVATSPTFLQQNMQSIAALARMEG HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHH LEAHARSVEARAKK HHHHHHHHHHHCCC >Mature Secondary Structure TCRTLTLHNEQEWPKLAQWLQGRNNPGDGVESAVRDIIAAVRERGDEALVEYTRNFDCP CCEEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC DFAPPLLVSEQEIARAAASVSIENREIISQAATYIRSFHEAQTEKSWFTTRPDGSILGQH CCCCCCEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCC VLPVDAAGLYVPGGQGGNTPLISSLLMTAIPAQVAGVPRLAICTPPRKDGSVNPHILAAA CCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHH HLLDIEEVYRVGGAWSVAGMAYGTQSMAPVDVIAGPGNIFVTTAKRLVQGTVGIDMIAGP HHHHHHHHHHCCCCEEEHHHHCCCCCCCCEEEEECCCCEEEEEHHHHHHHCCCEEEECCC SEVLILADSSANAEWLAADMLSQAEHDTLASAICVTDDQRLADNLWQELNKQCAALPRAT CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHCCCHH TAARSLEDWGAIVVTPNLSVAVAVANMVAPEHLEICTRDPWAVLPHIRHAGAIFMGQHSP HHHHHHHHCCEEEECCCCHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCEEEECCCCC EAVGDYFAGPNHVLPTLGTARFSSALSVQTFCKRTSIVATSPTFLQQNMQSIAALARMEG HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHH LEAHARSVEARAKK HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA