| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904275
Identifier: 220904275
GI number: 220904275
Start: 1171757
End: 1172479
Strand: Reverse
Name: 220904275
Synonym: Ddes_1002
Alternate gene names: NA
Gene position: 1172479-1171757 (Counterclockwise)
Preceding gene: 220904276
Following gene: 220904274
Centisome position: 40.8
GC content: 57.54
Gene sequence:
>723_bases ATGCCAACAAGCACGGAAGAACTCGACAATATTCTCGCCGTGATCCGCGCCGATTTTGATGTGGATTTCGAGCCGTTGCA GGTTGATGAAAATCCCCTGCACATTTTATCCATCAACAACATGCAGTCGCATCTGGACAGGCTGCTGCAGAAACGTGCCA TCCGTGATCCGCTCAAAGACCTGCCCCTGTGGGCCAAGGTCTGGCCCGGTTCATTTGTGCTTGGCCGCCTGCTGCGCAAA TATGAACCACAGGGTAAAAGCCTGCTGGAACTGGGCGCGGGCTGTGGCGTGCTCAGTCTTGTGGCCGCCCGTTACGGATT CACCCGCGTTGTGGTCAGCGACGTGGTGGACGAAGCCCTGTGCTTTGCCAAAGCCAACGTCCTGCGTAACAACCTTCAGG ATATCATCGAGGTTGCCCGCGTTGATGTGACCACTCCGGGGCGCGATCCGCGCTTTGCCGGTGGGTTCGACCTTATGGCC GCCTCGGAAATTCTTTACCTTGACGCCCTGCACAGGCCTCTGGTGAAGTTTGTGGACCGTCACCTGGCCCCCGGGGGCAA GGCCCTGTTCTGCACCGACATGGCCCGCGCCAAGCCTCATTTTGCCAAGCTGGCGGCAAAAACATTCAAGGTTACCGAAG GCCGCACTGGCGTCAAAACCAACGACGACAATGGCGAAGAGCAACGCCGCATATACAGTATTCTGATTCTGGAGCGCCCA TGA
Upstream 100 bases:
>100_bases CCTGCAAACATTTCGTGGCGCGACTTTTTACAACCCTCCGCGCAGAGCAGAAGCATTTTTAATGTTCCTCTGCTCTAATT CACGTTTTTAAGGAAAGTAC
Downstream 100 bases:
>100_bases ACACGCATCTTCCCCGCATACAGCTGGCCCCCTGTCCCAAGGGCTACACCCGTGATCTGGACAAAACCATGAGCCCGCCG CAAACCATCGCCCGTGTGCG
Product: methyltransferase small
Products: NA
Alternate protein names: Methyltransferase Small; Methyltransferase Domain Protein; Methyltransferase-
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MPTSTEELDNILAVIRADFDVDFEPLQVDENPLHILSINNMQSHLDRLLQKRAIRDPLKDLPLWAKVWPGSFVLGRLLRK YEPQGKSLLELGAGCGVLSLVAARYGFTRVVVSDVVDEALCFAKANVLRNNLQDIIEVARVDVTTPGRDPRFAGGFDLMA ASEILYLDALHRPLVKFVDRHLAPGGKALFCTDMARAKPHFAKLAAKTFKVTEGRTGVKTNDDNGEEQRRIYSILILERP
Sequences:
>Translated_240_residues MPTSTEELDNILAVIRADFDVDFEPLQVDENPLHILSINNMQSHLDRLLQKRAIRDPLKDLPLWAKVWPGSFVLGRLLRK YEPQGKSLLELGAGCGVLSLVAARYGFTRVVVSDVVDEALCFAKANVLRNNLQDIIEVARVDVTTPGRDPRFAGGFDLMA ASEILYLDALHRPLVKFVDRHLAPGGKALFCTDMARAKPHFAKLAAKTFKVTEGRTGVKTNDDNGEEQRRIYSILILERP >Mature_239_residues PTSTEELDNILAVIRADFDVDFEPLQVDENPLHILSINNMQSHLDRLLQKRAIRDPLKDLPLWAKVWPGSFVLGRLLRKY EPQGKSLLELGAGCGVLSLVAARYGFTRVVVSDVVDEALCFAKANVLRNNLQDIIEVARVDVTTPGRDPRFAGGFDLMAA SEILYLDALHRPLVKFVDRHLAPGGKALFCTDMARAKPHFAKLAAKTFKVTEGRTGVKTNDDNGEEQRRIYSILILERP
Specific function: Unknown
COG id: COG3897
COG function: function code R; Predicted methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26802; Mature: 26671
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSTEELDNILAVIRADFDVDFEPLQVDENPLHILSINNMQSHLDRLLQKRAIRDPLKD CCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEECHHHHHHHHHHHHHHHHCHHHH LPLWAKVWPGSFVLGRLLRKYEPQGKSLLELGAGCGVLSLVAARYGFTRVVVSDVVDEAL CCCHHHHCCCHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH CFAKANVLRNNLQDIIEVARVDVTTPGRDPRFAGGFDLMAASEILYLDALHRPLVKFVDR HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HLAPGGKALFCTDMARAKPHFAKLAAKTFKVTEGRTGVKTNDDNGEEQRRIYSILILERP HCCCCCCEEEECCHHHCCHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHEEEEECC >Mature Secondary Structure PTSTEELDNILAVIRADFDVDFEPLQVDENPLHILSINNMQSHLDRLLQKRAIRDPLKD CCCHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEECHHHHHHHHHHHHHHHHCHHHH LPLWAKVWPGSFVLGRLLRKYEPQGKSLLELGAGCGVLSLVAARYGFTRVVVSDVVDEAL CCCHHHHCCCHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH CFAKANVLRNNLQDIIEVARVDVTTPGRDPRFAGGFDLMAASEILYLDALHRPLVKFVDR HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HLAPGGKALFCTDMARAKPHFAKLAAKTFKVTEGRTGVKTNDDNGEEQRRIYSILILERP HCCCCCCEEEECCHHHCCHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA