| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is dnaJ [C]
Identifier: 220904258
GI number: 220904258
Start: 1151875
End: 1152879
Strand: Reverse
Name: dnaJ [C]
Synonym: Ddes_0985
Alternate gene names: 220904258
Gene position: 1152879-1151875 (Counterclockwise)
Preceding gene: 220904259
Following gene: 220904257
Centisome position: 40.12
GC content: 58.51
Gene sequence:
>1005_bases ATGCGACGCCGCTCCCGCCAGATATCCCTCAAGGAATGCTACGAAATTCTCAAGCTTGAGAAGAACGCTGACCTTGCCGC CGTAAAAAGGGCTTACCGCCGACGTGCCTTTGAGCTGCACCCTGACCTGAATCCCGGCAATGCCGAGGCCAGCCGGGATT TTCAGATGCTCAACGAAGCCTATGTGGCGCTTTCAGGCATCCTCAAGCATGAAGACGGAGTCAGGGCTACATCTGAAGCG CGAAAGGCGGCACAGAAACCCAGAAAAAACGCCGACCGGGCGAATGGCTCCGATAAAAAATCCGGCCCCGCTACAGATAC CGGCCAGACTGAAAGCAAGGCCCCTCCCCCGCCTGGCGGAACCGAAGCAACGGGGCAGCAGCAGGCAAAAACAGCCGGGG CAGACGAGGGCGCGCAGACCGAGCAGCAAAAGCCTCAAAGCGAACAAGCCCCCGACCCTGAAGAAAATACCGCAGACCGT AACGGCACGGCCTATGCGGAACAGGACGTGCTGCGCGACCTGCTTAACGATCCTTTTGCCCGCCGTGTTTTTGAAGATAT TTATAGCGAACTGAACCGGCAGCATGCCGAAAAACCACAGCAGGAAACAGCCGAAGCCCATACAGCGGAATCCGCCCCGC AAAGCAGGGCCAAGCCAAAGGCCGCGCAGAAAGAAAAGAAAAGCGCTCCACTCCATAAAAGCAACCTGGCCTGGGGTACG CCCAAATGGTCATCTGACATGACAAAAGGCGTCACCGGCCTGGTCAGGGGCTGGCTGCGCCGACAGATCGACGAAGAGCA AAGCCTTACCTTGCCCGCCGCAAACCTTGCGCCGGGCTGCCGGGTGCGCTTGCAGATACGCCAGGGAATTCAGGCTGAGC TTAAAACGGTTGAAATAACCCTGCCCCCTGACTTTACCGTGGGTAAACCCATACGCCTGCGCGGGCTGGGCAAGCGCGTC GGCCCCTGGCAAGGGGATCTCTATCTTACACTGTACACCGAGTAG
Upstream 100 bases:
>100_bases CGCAGCCTTTGAACGACAAGGCCGCCAGTACCTGCGCGAGCACGGCCTGCTTGCCAGCGATTGCAACTGCGAAGCCAACG CCCTAATCCTTAAATAAATC
Downstream 100 bases:
>100_bases GCCCTGCCCGTCCGCTGCGGGGCAGACGTGCCTCAGCCCATCCGTCAGTAGCAATGGTAACATACGGCTTCATTCCAGAT GAACGGAAAAACATTTCCCA
Product: heat shock protein DnaJ domain-containing protein
Products: NA
Alternate protein names: DNAJ Domain Protein; DNAJ Domain-Containing Protein; Heat Shock Protein DNAJ-Like; Heat Shock Protein DNAJ Domain-Containing Protein; DNAJ-Class Molecular Chaperone
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MRRRSRQISLKECYEILKLEKNADLAAVKRAYRRRAFELHPDLNPGNAEASRDFQMLNEAYVALSGILKHEDGVRATSEA RKAAQKPRKNADRANGSDKKSGPATDTGQTESKAPPPPGGTEATGQQQAKTAGADEGAQTEQQKPQSEQAPDPEENTADR NGTAYAEQDVLRDLLNDPFARRVFEDIYSELNRQHAEKPQQETAEAHTAESAPQSRAKPKAAQKEKKSAPLHKSNLAWGT PKWSSDMTKGVTGLVRGWLRRQIDEEQSLTLPAANLAPGCRVRLQIRQGIQAELKTVEITLPPDFTVGKPIRLRGLGKRV GPWQGDLYLTLYTE
Sequences:
>Translated_334_residues MRRRSRQISLKECYEILKLEKNADLAAVKRAYRRRAFELHPDLNPGNAEASRDFQMLNEAYVALSGILKHEDGVRATSEA RKAAQKPRKNADRANGSDKKSGPATDTGQTESKAPPPPGGTEATGQQQAKTAGADEGAQTEQQKPQSEQAPDPEENTADR NGTAYAEQDVLRDLLNDPFARRVFEDIYSELNRQHAEKPQQETAEAHTAESAPQSRAKPKAAQKEKKSAPLHKSNLAWGT PKWSSDMTKGVTGLVRGWLRRQIDEEQSLTLPAANLAPGCRVRLQIRQGIQAELKTVEITLPPDFTVGKPIRLRGLGKRV GPWQGDLYLTLYTE >Mature_334_residues MRRRSRQISLKECYEILKLEKNADLAAVKRAYRRRAFELHPDLNPGNAEASRDFQMLNEAYVALSGILKHEDGVRATSEA RKAAQKPRKNADRANGSDKKSGPATDTGQTESKAPPPPGGTEATGQQQAKTAGADEGAQTEQQKPQSEQAPDPEENTADR NGTAYAEQDVLRDLLNDPFARRVFEDIYSELNRQHAEKPQQETAEAHTAESAPQSRAKPKAAQKEKKSAPLHKSNLAWGT PKWSSDMTKGVTGLVRGWLRRQIDEEQSLTLPAANLAPGCRVRLQIRQGIQAELKTVEITLPPDFTVGKPIRLRGLGKRV GPWQGDLYLTLYTE
Specific function: Interacts With Dnak To Disassemble A Protein Complex At The Phage Lambda Origin Of Replication. Stimulates, Jointly With Grpe, The Atpase Activity Of Dnak. [C]
COG id: COG2214
COG function: function code O; DnaJ-class molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36977; Mature: 36977
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRSRQISLKECYEILKLEKNADLAAVKRAYRRRAFELHPDLNPGNAEASRDFQMLNEA CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHH YVALSGILKHEDGVRATSEARKAAQKPRKNADRANGSDKKSGPATDTGQTESKAPPPPGG HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC TEATGQQQAKTAGADEGAQTEQQKPQSEQAPDPEENTADRNGTAYAEQDVLRDLLNDPFA CCCCCHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHH RRVFEDIYSELNRQHAEKPQQETAEAHTAESAPQSRAKPKAAQKEKKSAPLHKSNLAWGT HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHCCCHHHHHHHHCCCCCCCCCCCCC PKWSSDMTKGVTGLVRGWLRRQIDEEQSLTLPAANLAPGCRVRLQIRQGIQAELKTVEIT CCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCEEEHHHHHCCCEEEEEEEEE LPPDFTVGKPIRLRGLGKRVGPWQGDLYLTLYTE ECCCCCCCCCEEEECCCCCCCCCCCCEEEEEECC >Mature Secondary Structure MRRRSRQISLKECYEILKLEKNADLAAVKRAYRRRAFELHPDLNPGNAEASRDFQMLNEA CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHH YVALSGILKHEDGVRATSEARKAAQKPRKNADRANGSDKKSGPATDTGQTESKAPPPPGG HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC TEATGQQQAKTAGADEGAQTEQQKPQSEQAPDPEENTADRNGTAYAEQDVLRDLLNDPFA CCCCCHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHH RRVFEDIYSELNRQHAEKPQQETAEAHTAESAPQSRAKPKAAQKEKKSAPLHKSNLAWGT HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHCCCHHHHHHHHCCCCCCCCCCCCC PKWSSDMTKGVTGLVRGWLRRQIDEEQSLTLPAANLAPGCRVRLQIRQGIQAELKTVEIT CCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCEEEHHHHHCCCEEEEEEEEE LPPDFTVGKPIRLRGLGKRVGPWQGDLYLTLYTE ECCCCCCCCCEEEECCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA