| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904259
Identifier: 220904259
GI number: 220904259
Start: 1152883
End: 1153332
Strand: Reverse
Name: 220904259
Synonym: Ddes_0986
Alternate gene names: NA
Gene position: 1153332-1152883 (Counterclockwise)
Preceding gene: 220904260
Following gene: 220904258
Centisome position: 40.14
GC content: 56.22
Gene sequence:
>450_bases ATGTCTGTTTCACCGGATACGGTTTTCGACTGCCGCATGTGCGGCCACTGCTGCGAAGGAGTCGGCGGCATTGTGGTCAG CCCCACTGACCTTACGCGCCTAGCCGCGCACATGGGGCTTGCCCCCGAAGCCGTTATAGAAGGGTATTGCTACTATGCGG GCGGCAAATTGAAAATCCGCAGCGGTGCAGACGGTTATTGCGTTTTTTTCCAACAGGGTAAAGGCTGCGGTGTACACGAA GGCAAGCCTGCCATCTGTCGTGCCTGGCCTTTTTTTCGCGGTAATATTGAAGACCCCGCAAGCCTTGCCATGGCTAAAGA ATTTTGTCCGGGCATCAGTCTGGAGGCTTCCCACGCAGCCTTTGAACGACAAGGCCGCCAGTACCTGCGCGAGCACGGCC TGCTTGCCAGCGATTGCAACTGCGAAGCCAACGCCCTAATCCTTAAATAA
Upstream 100 bases:
>100_bases GCTTTTGACCGCTCTTGGCATTACCGTGATAGAGGACGCCTGCATCATGGTCGAGCATGCCCGCCTTTTGCCCAACGCCG CAACTATTCAAGGATAATTC
Downstream 100 bases:
>100_bases ATCATGCGACGCCGCTCCCGCCAGATATCCCTCAAGGAATGCTACGAAATTCTCAAGCTTGAGAAGAACGCTGACCTTGC CGCCGTAAAAAGGGCTTACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MSVSPDTVFDCRMCGHCCEGVGGIVVSPTDLTRLAAHMGLAPEAVIEGYCYYAGGKLKIRSGADGYCVFFQQGKGCGVHE GKPAICRAWPFFRGNIEDPASLAMAKEFCPGISLEASHAAFERQGRQYLREHGLLASDCNCEANALILK
Sequences:
>Translated_149_residues MSVSPDTVFDCRMCGHCCEGVGGIVVSPTDLTRLAAHMGLAPEAVIEGYCYYAGGKLKIRSGADGYCVFFQQGKGCGVHE GKPAICRAWPFFRGNIEDPASLAMAKEFCPGISLEASHAAFERQGRQYLREHGLLASDCNCEANALILK >Mature_148_residues SVSPDTVFDCRMCGHCCEGVGGIVVSPTDLTRLAAHMGLAPEAVIEGYCYYAGGKLKIRSGADGYCVFFQQGKGCGVHEG KPAICRAWPFFRGNIEDPASLAMAKEFCPGISLEASHAAFERQGRQYLREHGLLASDCNCEANALILK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15996; Mature: 15864
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 10.1 %Cys+Met (Translated Protein) 7.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 9.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSPDTVFDCRMCGHCCEGVGGIVVSPTDLTRLAAHMGLAPEAVIEGYCYYAGGKLKIR CCCCCCCCHHHHHHHHHHCCCCCEEECCHHHHHHHHHCCCCHHHHHCCEEEEECCEEEEC SGADGYCVFFQQGKGCGVHEGKPAICRAWPFFRGNIEDPASLAMAKEFCPGISLEASHAA CCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHH FERQGRQYLREHGLLASDCNCEANALILK HHHHHHHHHHHCCCEECCCCCCCCEEEEC >Mature Secondary Structure SVSPDTVFDCRMCGHCCEGVGGIVVSPTDLTRLAAHMGLAPEAVIEGYCYYAGGKLKIR CCCCCCCHHHHHHHHHHCCCCCEEECCHHHHHHHHHCCCCHHHHHCCEEEEECCEEEEC SGADGYCVFFQQGKGCGVHEGKPAICRAWPFFRGNIEDPASLAMAKEFCPGISLEASHAA CCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHH FERQGRQYLREHGLLASDCNCEANALILK HHHHHHHHHHHCCCEECCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA