| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904253
Identifier: 220904253
GI number: 220904253
Start: 1146946
End: 1147899
Strand: Reverse
Name: 220904253
Synonym: Ddes_0980
Alternate gene names: NA
Gene position: 1147899-1146946 (Counterclockwise)
Preceding gene: 220904256
Following gene: 220904252
Centisome position: 39.95
GC content: 61.32
Gene sequence:
>954_bases ATGACACCGCCCCCCGCCAGAACGCACGGCCCTGCCGGACAGGCCTCCTCCGGACCATCCACTCCCGGAACGACCAGAGG GGACGCCGCAAACGCCCTGGCAGCGCCCAAAGGCCGCCGTGCCGCTCTGGCCCGTGCGCATGGCGCCACCCTGCTCTTCG GAGCTTCGGGCATTTTCGGCAAACTCTGCCAATGCTCCGCTCCCATGCTTGTTTGCGGGCGTGCCATCTTTGCCGTAGCG GCACTCACCCTTGCAGGACTTGGTAAAAAACAGCCCCCCTGGCGCGGGCTGCATGCTTGCGACCTGTTGGCGCTTACCAT AAGCGGCACATTGCTTGCAGCACATTTCGTAATGTTTTTCATGGGGATACATATTGGCGGCGTGGCCGTCGGCACGCTTG GCTTTGCCTGTTTTCCGGCATTCACAACCCTGATCGAAAGTCTCATATACCGGGAGCGCCCCAGTTTCGCCGAGATGCGC GGCCTGGGCATGGTAACGCTGGGGCTTGTCTGCACAACCCCATCCTTTTCATTTGCTCATGAAGGCACAGTCGGCCTGCT GCTGGGCGTGGCATCCGGCCTGGCTTACGCCCTGGTGACCGTGGGCAACCGCCGCTTTGCCGGGCATCTTCCGGGACTGC AAACCACTTGGTGGCAGAATACAGTTACGGCCGTTGTTCTCCTGCCCTTTGTCTGGCGGCAGTTCAGCACTGTAAGCACA TTGGACTGGCTGTGGATCGCCAGCCTGGGTTTGTTGTGCTCCGCCCTGGCCTACGTTCTTTTCATCAACAGCCTCACTGT TCTCAAGGCACGCCAGGCCGCCCTTATCATTACGCTGGAGCCGGTTTACGCCATTGCGGCGGCCTGGCTGGTTCTGGGTG ATGCGCCGGGGGGGCGCGTTTTTCTGGGCGGCGGGCTTATCCTTGGCGCAATTTTTCTGGCAAACCGACGCTAA
Upstream 100 bases:
>100_bases AACATTTTAGGCAGTTCCGCCACGCGCGCACGACTGTGTGCCGCCTGCGCAAGTTTACGTCCGGCGTACCCGCACCGGGC ATGCTTTTTTAAGGATAATT
Downstream 100 bases:
>100_bases ACGCCGTCACAGGGGCGCCCGGACTTTACCTCTCGACTCGAAGCCGGTGGTTTGGCATGATTGGATCCGGCAGCCAGCGC CGCTGGCATTCCGGTTGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MTPPPARTHGPAGQASSGPSTPGTTRGDAANALAAPKGRRAALARAHGATLLFGASGIFGKLCQCSAPMLVCGRAIFAVA ALTLAGLGKKQPPWRGLHACDLLALTISGTLLAAHFVMFFMGIHIGGVAVGTLGFACFPAFTTLIESLIYRERPSFAEMR GLGMVTLGLVCTTPSFSFAHEGTVGLLLGVASGLAYALVTVGNRRFAGHLPGLQTTWWQNTVTAVVLLPFVWRQFSTVST LDWLWIASLGLLCSALAYVLFINSLTVLKARQAALIITLEPVYAIAAAWLVLGDAPGGRVFLGGGLILGAIFLANRR
Sequences:
>Translated_317_residues MTPPPARTHGPAGQASSGPSTPGTTRGDAANALAAPKGRRAALARAHGATLLFGASGIFGKLCQCSAPMLVCGRAIFAVA ALTLAGLGKKQPPWRGLHACDLLALTISGTLLAAHFVMFFMGIHIGGVAVGTLGFACFPAFTTLIESLIYRERPSFAEMR GLGMVTLGLVCTTPSFSFAHEGTVGLLLGVASGLAYALVTVGNRRFAGHLPGLQTTWWQNTVTAVVLLPFVWRQFSTVST LDWLWIASLGLLCSALAYVLFINSLTVLKARQAALIITLEPVYAIAAAWLVLGDAPGGRVFLGGGLILGAIFLANRR >Mature_316_residues TPPPARTHGPAGQASSGPSTPGTTRGDAANALAAPKGRRAALARAHGATLLFGASGIFGKLCQCSAPMLVCGRAIFAVAA LTLAGLGKKQPPWRGLHACDLLALTISGTLLAAHFVMFFMGIHIGGVAVGTLGFACFPAFTTLIESLIYRERPSFAEMRG LGMVTLGLVCTTPSFSFAHEGTVGLLLGVASGLAYALVTVGNRRFAGHLPGLQTTWWQNTVTAVVLLPFVWRQFSTVSTL DWLWIASLGLLCSALAYVLFINSLTVLKARQAALIITLEPVYAIAAAWLVLGDAPGGRVFLGGGLILGAIFLANRR
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33027; Mature: 32896
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPPARTHGPAGQASSGPSTPGTTRGDAANALAAPKGRRAALARAHGATLLFGASGIFG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHCCCEEEEECCHHHH KLCQCSAPMLVCGRAIFAVAALTLAGLGKKQPPWRGLHACDLLALTISGTLLAAHFVMFF HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH MGIHIGGVAVGTLGFACFPAFTTLIESLIYRERPSFAEMRGLGMVTLGLVCTTPSFSFAH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHEECCCCCCCCC EGTVGLLLGVASGLAYALVTVGNRRFAGHLPGLQTTWWQNTVTAVVLLPFVWRQFSTVST CCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LDWLWIASLGLLCSALAYVLFINSLTVLKARQAALIITLEPVYAIAAAWLVLGDAPGGRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHEECCCCCEE FLGGGLILGAIFLANRR EECCHHHHHHHHHHCCC >Mature Secondary Structure TPPPARTHGPAGQASSGPSTPGTTRGDAANALAAPKGRRAALARAHGATLLFGASGIFG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHCCCEEEEECCHHHH KLCQCSAPMLVCGRAIFAVAALTLAGLGKKQPPWRGLHACDLLALTISGTLLAAHFVMFF HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH MGIHIGGVAVGTLGFACFPAFTTLIESLIYRERPSFAEMRGLGMVTLGLVCTTPSFSFAH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHEECCCCCCCCC EGTVGLLLGVASGLAYALVTVGNRRFAGHLPGLQTTWWQNTVTAVVLLPFVWRQFSTVST CCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LDWLWIASLGLLCSALAYVLFINSLTVLKARQAALIITLEPVYAIAAAWLVLGDAPGGRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHEECCCCCEE FLGGGLILGAIFLANRR EECCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA