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The map label for this gene is rpmF

Identifier: 218905054

GI number: 218905054

Start: 3779369

End: 3779542

Strand: Reverse

Name: rpmF

Synonym: BCAH820_3938

Alternate gene names: 218905054

Gene position: 3779542-3779369 (Counterclockwise)

Preceding gene: 218905055

Following gene: 218905053

Centisome position: 71.28

GC content: 39.66

Gene sequence:

>174_bases
ATGGCTGTACCTTTTAGAAGAACTTCTAAAACAGTAAAAAGAAAGCGTCGTACGCATTTCAAATTATCAGTACCTGGTAT
GGTAGAGTGCCCAAGCTGTGGTGAAGCGAAATTAGCTCACCGTGTATGTAAAGCATGCGGTACTTACAAAGGTAAAGAAG
TAATCAGCAAGTAA

Upstream 100 bases:

>100_bases
CCAAGATTGGCAGGACTTGCAAAGTTTTTTGACAAATAATCGGAAGACTGGTTCAGGCCTTCATATGAAAATAACTATTT
CTTTTAAGGAGGTGGGAAGA

Downstream 100 bases:

>100_bases
TTGCGGGGAAATAAACGTAGAAGATATCTTCTACGTTTATTTTTTTTGTCTTATTCTTCATTTGTTGTATTCTATCTTTT
CTAGTAACTGCATATGTTTA

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 57; Mature: 56

Protein sequence:

>57_residues
MAVPFRRTSKTVKRKRRTHFKLSVPGMVECPSCGEAKLAHRVCKACGTYKGKEVISK

Sequences:

>Translated_57_residues
MAVPFRRTSKTVKRKRRTHFKLSVPGMVECPSCGEAKLAHRVCKACGTYKGKEVISK
>Mature_56_residues
AVPFRRTSKTVKRKRRTHFKLSVPGMVECPSCGEAKLAHRVCKACGTYKGKEVISK

Specific function: Unknown

COG id: COG0333

COG function: function code J; Ribosomal protein L32

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL32_BACAA (C3P693)

Other databases:

- EMBL:   CP001598
- RefSeq:   YP_002868159.1
- ProteinModelPortal:   C3P693
- SMR:   C3P693
- EnsemblBacteria:   EBBACT00000129569
- GeneID:   7851072
- GenomeReviews:   CP001598_GR
- KEGG:   bai:BAA_4088
- GeneTree:   EBGT00050000001920
- ProtClustDB:   PRK12286
- GO:   GO:0006412
- HAMAP:   MF_00340
- InterPro:   IPR002677
- InterPro:   IPR011332
- TIGRFAMs:   TIGR01031

Pfam domain/function: PF01783 Ribosomal_L32p; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 6394; Mature: 6263

Theoretical pI: Translated: 11.08; Mature: 11.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
10.5 %Cys+Met (Translated Protein)
7.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPFRRTSKTVKRKRRTHFKLSVPGMVECPSCGEAKLAHRVCKACGTYKGKEVISK
CCCCCCHHHHHHHHHHHCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCC
>Mature Secondary Structure 
AVPFRRTSKTVKRKRRTHFKLSVPGMVECPSCGEAKLAHRVCKACGTYKGKEVISK
CCCCCHHHHHHHHHHHCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA