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The map label for this gene is ylbO [H]

Identifier: 218905053

GI number: 218905053

Start: 3778733

End: 3779239

Strand: Reverse

Name: ylbO [H]

Synonym: BCAH820_3937

Alternate gene names: 218905053

Gene position: 3779239-3778733 (Counterclockwise)

Preceding gene: 218905054

Following gene: 218905051

Centisome position: 71.27

GC content: 35.7

Gene sequence:

>507_bases
ATGGCGACAACAAGACAAGATGCTTGGACTGATGATGAAGATTTGCTTCTGGCAGAAGTAGTACTCCGGCATATTCGAGA
AGGTGGAACGCAATTATCTGCCTTTAAAGAAGTGGGAAGACATCTATCTCGTACACCAGCAGCATGCGGCTTTAGATGGA
ATTCTTACGTTAGAAAGCAATACAAAGAACGTATTGAAGAAGCGAAGCAACTGCGTAAAGTGGAACATTATGAAGTGAAA
GAGACGAAGGTATTAGAGCCTAAGTTAATTACATTGAATGATGTTATTGATTTCTTACAAAATTATAAAGATGAAAACTC
TTTAATGGTGTTGCAACAGCAAATTGAATCGTTACAAACAGAAAAAGAAAGTCTTCTGGAACGATTATCAGTTTATGAGG
AAGAATATAGAACATTGCTTGATTATATTGATCAAAAAAGAAGTGTAATGGTAGCGGAAAGAAATAGTGCTCGTTCGAAT
GGGAAATTAGAGAAATTAAAGAAATAA

Upstream 100 bases:

>100_bases
TCTACGTTTATTTTTTTTGTCTTATTCTTCATTTGTTGTATTCTATCTTTTCTAGTAACTGCATATGTTTAATAAAAAAT
GCATAGGGAGGACTAGAGAG

Downstream 100 bases:

>100_bases
AAAAACAGCTGCTATGTAGCTGTTTTTTTATTTCTTATGCAGACTCTTCGTTTGTAACCGCATTCAAATTTGTTTCTGGG
TGCCAAACGTAAAAATCACC

Product: putative DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MATTRQDAWTDDEDLLLAEVVLRHIREGGTQLSAFKEVGRHLSRTPAACGFRWNSYVRKQYKERIEEAKQLRKVEHYEVK
ETKVLEPKLITLNDVIDFLQNYKDENSLMVLQQQIESLQTEKESLLERLSVYEEEYRTLLDYIDQKRSVMVAERNSARSN
GKLEKLKK

Sequences:

>Translated_168_residues
MATTRQDAWTDDEDLLLAEVVLRHIREGGTQLSAFKEVGRHLSRTPAACGFRWNSYVRKQYKERIEEAKQLRKVEHYEVK
ETKVLEPKLITLNDVIDFLQNYKDENSLMVLQQQIESLQTEKESLLERLSVYEEEYRTLLDYIDQKRSVMVAERNSARSN
GKLEKLKK
>Mature_167_residues
ATTRQDAWTDDEDLLLAEVVLRHIREGGTQLSAFKEVGRHLSRTPAACGFRWNSYVRKQYKERIEEAKQLRKVEHYEVKE
TKVLEPKLITLNDVIDFLQNYKDENSLMVLQQQIESLQTEKESLLERLSVYEEEYRTLLDYIDQKRSVMVAERNSARSNG
KLEKLKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH myb-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014243
- InterPro:   IPR012287
- InterPro:   IPR017930
- InterPro:   IPR001005 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19850; Mature: 19719

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS00037 MYB_1 ; PS50090 MYB_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTRQDAWTDDEDLLLAEVVLRHIREGGTQLSAFKEVGRHLSRTPAACGFRWNSYVRKQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHH
YKERIEEAKQLRKVEHYEVKETKVLEPKLITLNDVIDFLQNYKDENSLMVLQQQIESLQT
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
EKESLLERLSVYEEEYRTLLDYIDQKRSVMVAERNSARSNGKLEKLKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCC
>Mature Secondary Structure 
ATTRQDAWTDDEDLLLAEVVLRHIREGGTQLSAFKEVGRHLSRTPAACGFRWNSYVRKQ
CCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHH
YKERIEEAKQLRKVEHYEVKETKVLEPKLITLNDVIDFLQNYKDENSLMVLQQQIESLQT
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
EKESLLERLSVYEEEYRTLLDYIDQKRSVMVAERNSARSNGKLEKLKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]