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The map label for this gene is ftsY [H]

Identifier: 218904977

GI number: 218904977

Start: 3695342

End: 3696331

Strand: Reverse

Name: ftsY [H]

Synonym: BCAH820_3861

Alternate gene names: 218904977

Gene position: 3696331-3695342 (Counterclockwise)

Preceding gene: 218904978

Following gene: 218904976

Centisome position: 69.71

GC content: 36.97

Gene sequence:

>990_bases
ATGAGCTTTTTTAAAAAACTAAAAGAAAAAATTTCAAAACAAACGGATACGGTAACAGAGAAGTTTAAACAAGGATTAGA
AAAAACGAGAAATTCGTTTGCGGATAAAGTAAATGATTTAGTCTTTCGTTACCGTAAAGTAGATGAAGATTTCTTCGAGG
AATTAGAAGAAATCTTAATCGGTGCAGATGTGGGCGTTTCAACAGTGATGGAATTAATCGATCAGTTGAAAGAAGAAGTG
CAACGCCGTAACATTCAAGACCCAAGAGAAGTACAAGCTGTTATTTCGGAAAAATTAATAGAAATTTATAAAGGTGACAG
CGATTTTACTAATGAAGTTAATATGCAAAAGGATGGCTTGACAGTTGTTTTATTTGTTGGTGTTAATGGTGTAGGTAAAA
CGACAACAATTGGTAAGATGGCTCATAAGTTTAAATCAGAAGGTAAGTCTGTCTTATTAGCGGCAGGAGATACATTCCGT
GCTGGAGCGATTGAACAATTAGAAGTTTGGGGCGATCGCGTTGGGGTAGAAGTGATTAAACAAGGATCAGGATCTGATCC
AGCAGCGGTTATGTATGATGCGGTACAAGCTGCAAAAGCACGTAACGTAGACGTATTACTATGTGATACAGCAGGACGTT
TACAAAATAAAGTGAACTTAATGAAAGAGTTAGAGAAAGTAAAGCGCGTAATTGAGCGTGAAGTACCAGGAGCTCCTCAT
GAAGTATTACTTGTTATTGATGCTACAACGGGACAAAACGGTTTAAGTCAAGCGAAAACATTCCGTGAAGCAACGAATGT
TACTGGTATTGTTTTAACGAAGTTAGATGGAACTGCTAAAGGTGGTATTGTATTAGCGATTCGTAACGAAATGGATGTAC
CGGTGAAATTCGTTGGATTAGGAGAACAAATGGATGATCTGCAACAGTTCGATCCAGAACAATATGTATATGGTTTATTT
GCGAACTTAGTAGAAACAGAAGAAGTATAA

Upstream 100 bases:

>100_bases
CGGTGTAACAATGCAAGAGTCAGGGGTATCTAAACTTGTCTCGGTTCGTTTAGATGATGGAGAAGAACTAGTCGCAAGCA
AATAGGAAGGATGGGACAGT

Downstream 100 bases:

>100_bases
GTGAAAGAAGCGGTATTTTCCGCTTCTTTTTCTATAAAAATATGAGATGTTAAGAAAAAAACTTGACACTCTTTTGTACT
CCATGTAAACTAATTCATGT

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MSFFKKLKEKISKQTDTVTEKFKQGLEKTRNSFADKVNDLVFRYRKVDEDFFEELEEILIGADVGVSTVMELIDQLKEEV
QRRNIQDPREVQAVISEKLIEIYKGDSDFTNEVNMQKDGLTVVLFVGVNGVGKTTTIGKMAHKFKSEGKSVLLAAGDTFR
AGAIEQLEVWGDRVGVEVIKQGSGSDPAAVMYDAVQAAKARNVDVLLCDTAGRLQNKVNLMKELEKVKRVIEREVPGAPH
EVLLVIDATTGQNGLSQAKTFREATNVTGIVLTKLDGTAKGGIVLAIRNEMDVPVKFVGLGEQMDDLQQFDPEQYVYGLF
ANLVETEEV

Sequences:

>Translated_329_residues
MSFFKKLKEKISKQTDTVTEKFKQGLEKTRNSFADKVNDLVFRYRKVDEDFFEELEEILIGADVGVSTVMELIDQLKEEV
QRRNIQDPREVQAVISEKLIEIYKGDSDFTNEVNMQKDGLTVVLFVGVNGVGKTTTIGKMAHKFKSEGKSVLLAAGDTFR
AGAIEQLEVWGDRVGVEVIKQGSGSDPAAVMYDAVQAAKARNVDVLLCDTAGRLQNKVNLMKELEKVKRVIEREVPGAPH
EVLLVIDATTGQNGLSQAKTFREATNVTGIVLTKLDGTAKGGIVLAIRNEMDVPVKFVGLGEQMDDLQQFDPEQYVYGLF
ANLVETEEV
>Mature_328_residues
SFFKKLKEKISKQTDTVTEKFKQGLEKTRNSFADKVNDLVFRYRKVDEDFFEELEEILIGADVGVSTVMELIDQLKEEVQ
RRNIQDPREVQAVISEKLIEIYKGDSDFTNEVNMQKDGLTVVLFVGVNGVGKTTTIGKMAHKFKSEGKSVLLAAGDTFRA
GAIEQLEVWGDRVGVEVIKQGSGSDPAAVMYDAVQAAKARNVDVLLCDTAGRLQNKVNLMKELEKVKRVIEREVPGAPHE
VLLVIDATTGQNGLSQAKTFREATNVTGIVLTKLDGTAKGGIVLAIRNEMDVPVKFVGLGEQMDDLQQFDPEQYVYGLFA
NLVETEEV

Specific function: Required for normal cell growth and morphogenesis; translocation of at least 1 protein is impaired in its absence [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=276, Percent_Identity=28.6231884057971, Blast_Score=131, Evalue=9e-31,
Organism=Homo sapiens, GI226371618, Length=201, Percent_Identity=32.8358208955224, Blast_Score=129, Evalue=3e-30,
Organism=Homo sapiens, GI23308697, Length=293, Percent_Identity=31.0580204778157, Blast_Score=112, Evalue=5e-25,
Organism=Homo sapiens, GI295424842, Length=293, Percent_Identity=31.0580204778157, Blast_Score=112, Evalue=6e-25,
Organism=Homo sapiens, GI89061728, Length=135, Percent_Identity=31.8518518518519, Blast_Score=87, Evalue=1e-17,
Organism=Escherichia coli, GI1789874, Length=301, Percent_Identity=49.8338870431894, Blast_Score=288, Evalue=5e-79,
Organism=Escherichia coli, GI1788963, Length=272, Percent_Identity=36.3970588235294, Blast_Score=157, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI17539958, Length=281, Percent_Identity=30.9608540925267, Blast_Score=133, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI193206261, Length=254, Percent_Identity=35.0393700787402, Blast_Score=115, Evalue=4e-26,
Organism=Saccharomyces cerevisiae, GI6325345, Length=270, Percent_Identity=28.5185185185185, Blast_Score=138, Evalue=1e-33,
Organism=Saccharomyces cerevisiae, GI6320498, Length=216, Percent_Identity=29.6296296296296, Blast_Score=86, Evalue=9e-18,
Organism=Drosophila melanogaster, GI17647949, Length=279, Percent_Identity=28.673835125448, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24641198, Length=305, Percent_Identity=27.8688524590164, Blast_Score=101, Evalue=7e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 36481; Mature: 36350

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFFKKLKEKISKQTDTVTEKFKQGLEKTRNSFADKVNDLVFRYRKVDEDFFEELEEILI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
GADVGVSTVMELIDQLKEEVQRRNIQDPREVQAVISEKLIEIYKGDSDFTNEVNMQKDGL
CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
TVVLFVGVNGVGKTTTIGKMAHKFKSEGKSVLLAAGDTFRAGAIEQLEVWGDRVGVEVIK
EEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
QGSGSDPAAVMYDAVQAAKARNVDVLLCDTAGRLQNKVNLMKELEKVKRVIEREVPGAPH
CCCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EVLLVIDATTGQNGLSQAKTFREATNVTGIVLTKLDGTAKGGIVLAIRNEMDVPVKFVGL
EEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEEC
GEQMDDLQQFDPEQYVYGLFANLVETEEV
CHHHHHHHHCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SFFKKLKEKISKQTDTVTEKFKQGLEKTRNSFADKVNDLVFRYRKVDEDFFEELEEILI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
GADVGVSTVMELIDQLKEEVQRRNIQDPREVQAVISEKLIEIYKGDSDFTNEVNMQKDGL
CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
TVVLFVGVNGVGKTTTIGKMAHKFKSEGKSVLLAAGDTFRAGAIEQLEVWGDRVGVEVIK
EEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
QGSGSDPAAVMYDAVQAAKARNVDVLLCDTAGRLQNKVNLMKELEKVKRVIEREVPGAPH
CCCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EVLLVIDATTGQNGLSQAKTFREATNVTGIVLTKLDGTAKGGIVLAIRNEMDVPVKFVGL
EEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEEC
GEQMDDLQQFDPEQYVYGLFANLVETEEV
CHHHHHHHHCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584053; 9384377; 8654983 [H]