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The map label for this gene is 218904976

Identifier: 218904976

GI number: 218904976

Start: 3694876

End: 3695208

Strand: Reverse

Name: 218904976

Synonym: BCAH820_3860

Alternate gene names: NA

Gene position: 3695208-3694876 (Counterclockwise)

Preceding gene: 218904977

Following gene: 218904975

Centisome position: 69.69

GC content: 33.33

Gene sequence:

>333_bases
ATGCTCGAAAAAACAACGAGAATGAACTATTTATTTGATTTTTATCAATCGTTGTTAACGCAAAAACAAAGAAGTTATAT
GTCGCTTTATTATCTAGATGATTTATCTCTTGGTGAAATTGCGGAAGAATTTGATGTAAGTCGCCAAGCCGTGTATGATA
ACATTAAACGGACTGAAGCGATGCTTGAAGAATATGAAGAAAAATTAGTATTACTTCAAAAGTTTCAAGAGCGACAGCGA
CTTGTTGCAAAGCTAAAACAGCTAATCAGCGAAGAAGAGCATGTGAATGAAGAAATGAAACAAGTTGTTGAAGCTATCGA
AAAATTAGATTAG

Upstream 100 bases:

>100_bases
ATAAAAATATGAGATGTTAAGAAAAAAACTTGACACTCTTTTGTACTCCATGTAAACTAATTCATGTAAAGGGAAATCAC
TTAACAAAGGATGATCCAAC

Downstream 100 bases:

>100_bases
GAGGGCGGCAATATGGCATTTGAAGGATTAGCCGACCGACTTCAACAGACGATGCAAAAAATCCGCGGCAAAGGAAAAGT
TTCTGAAGCCGATGTGAAAG

Product: putative DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MLEKTTRMNYLFDFYQSLLTQKQRSYMSLYYLDDLSLGEIAEEFDVSRQAVYDNIKRTEAMLEEYEEKLVLLQKFQERQR
LVAKLKQLISEEEHVNEEMKQVVEAIEKLD

Sequences:

>Translated_110_residues
MLEKTTRMNYLFDFYQSLLTQKQRSYMSLYYLDDLSLGEIAEEFDVSRQAVYDNIKRTEAMLEEYEEKLVLLQKFQERQR
LVAKLKQLISEEEHVNEEMKQVVEAIEKLD
>Mature_110_residues
MLEKTTRMNYLFDFYQSLLTQKQRSYMSLYYLDDLSLGEIAEEFDVSRQAVYDNIKRTEAMLEEYEEKLVLLQKFQERQR
LVAKLKQLISEEEHVNEEMKQVVEAIEKLD

Specific function: Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein

COG id: COG2739

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0122 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1298_BACC2 (B7IUK5)

Other databases:

- EMBL:   CP001186
- RefSeq:   YP_002447410.1
- ProteinModelPortal:   B7IUK5
- SMR:   B7IUK5
- EnsemblBacteria:   EBBACT00000101948
- GeneID:   7181460
- GenomeReviews:   CP001186_GR
- KEGG:   bcg:BCG9842_B1298
- GeneTree:   EBGT00050000002610
- HOGENOM:   HBG427419
- OMA:   KSYMSLY
- ProtClustDB:   PRK00118
- HAMAP:   MF_00245
- InterPro:   IPR013324
- InterPro:   IPR007394
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: PF04297 UPF0122; SSF88659 Sigma_r3_r4

EC number: NA

Molecular weight: Translated: 13310; Mature: 13310

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEKTTRMNYLFDFYQSLLTQKQRSYMSLYYLDDLSLGEIAEEFDVSRQAVYDNIKRTEA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MLEEYEEKLVLLQKFQERQRLVAKLKQLISEEEHVNEEMKQVVEAIEKLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLEKTTRMNYLFDFYQSLLTQKQRSYMSLYYLDDLSLGEIAEEFDVSRQAVYDNIKRTEA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MLEEYEEKLVLLQKFQERQRLVAKLKQLISEEEHVNEEMKQVVEAIEKLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA