Click here to switch to the map view.

The map label for this gene is hslV

Identifier: 218904958

GI number: 218904958

Start: 3680285

End: 3680827

Strand: Reverse

Name: hslV

Synonym: BCAH820_3842

Alternate gene names: 218904958

Gene position: 3680827-3680285 (Counterclockwise)

Preceding gene: 218904959

Following gene: 218904957

Centisome position: 69.41

GC content: 41.62

Gene sequence:

>543_bases
ATGGGAAATTTCCACGCTACAACGATATTTGCAGTTCATCATAATGGAGAATGTGCAATGGCTGGAGATGGCCAGGTGAC
GATGGGGAATGCTGTTGTAATGAAACATACAGCTCGTAAAGTTCGTAAACTTTTCCAAGGGAAAGTTTTAGCTGGTTTTG
CAGGTTCGGTTGCTGATGCATTTACTCTTTTTGAAATGTTTGAAGGGAAATTAGAAGAGTACAATGGAAACCTGCAGCGT
GCTGCTGTTGAGATGGCAAAACAATGGCGCGGCGACAAAATGTTACGTCAGCTAGAAGCGATGCTCATTGTCATGGATAA
AACAACGATGCTCCTTGTTTCAGGTACGGGAGAAGTGATTGAACCGGATGATGGTATTTTAGCAATTGGATCTGGCGGGA
ATTATGCGCTTTCAGCAGGTCGTGCTTTAAAACAATATGCAAGTGAACATTTAACAGCGAAGCAAATTGCGAAAGCGAGT
TTAGAAATTGCTGGCGATATTTGTGTTTATACAAACCACAACATAATTGTGGAAGAATTGTAG

Upstream 100 bases:

>100_bases
GCATGTCTCTAAAGAAAGATTGCGTTCTGTCTACATGAAGCATCACCCACGGGCATAAATTGCTTTTAAAGCTATAAAAA
CATATAAAGGAGTTTTTTCT

Downstream 100 bases:

>100_bases
AATCGTAAGGGAGGCATTTTATATGCATTTACATTTTACTCCGCGTCAAATTGTGGAAAAATTAGATCAATACATTATCG
GTCAAAAAGATGCGAAGAAA

Product: ATP-dependent protease peptidase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MGNFHATTIFAVHHNGECAMAGDGQVTMGNAVVMKHTARKVRKLFQGKVLAGFAGSVADAFTLFEMFEGKLEEYNGNLQR
AAVEMAKQWRGDKMLRQLEAMLIVMDKTTMLLVSGTGEVIEPDDGILAIGSGGNYALSAGRALKQYASEHLTAKQIAKAS
LEIAGDICVYTNHNIIVEEL

Sequences:

>Translated_180_residues
MGNFHATTIFAVHHNGECAMAGDGQVTMGNAVVMKHTARKVRKLFQGKVLAGFAGSVADAFTLFEMFEGKLEEYNGNLQR
AAVEMAKQWRGDKMLRQLEAMLIVMDKTTMLLVSGTGEVIEPDDGILAIGSGGNYALSAGRALKQYASEHLTAKQIAKAS
LEIAGDICVYTNHNIIVEEL
>Mature_179_residues
GNFHATTIFAVHHNGECAMAGDGQVTMGNAVVMKHTARKVRKLFQGKVLAGFAGSVADAFTLFEMFEGKLEEYNGNLQRA
AVEMAKQWRGDKMLRQLEAMLIVMDKTTMLLVSGTGEVIEPDDGILAIGSGGNYALSAGRALKQYASEHLTAKQIAKASL
EIAGDICVYTNHNIIVEEL

Specific function: Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery

COG id: COG5405

COG function: function code O; ATP-dependent protease HslVU (ClpYQ), peptidase subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase T1B family. HslV subfamily

Homologues:

Organism=Escherichia coli, GI1790367, Length=174, Percent_Identity=55.7471264367816, Blast_Score=200, Evalue=4e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): HSLV_BACAA (C3P5N2)

Other databases:

- EMBL:   CP001598
- RefSeq:   YP_002868068.1
- ProteinModelPortal:   C3P5N2
- SMR:   C3P5N2
- MEROPS:   T01.007
- EnsemblBacteria:   EBBACT00000128351
- GeneID:   7850877
- GenomeReviews:   CP001598_GR
- KEGG:   bai:BAA_3991
- GeneTree:   EBGT00050000002074
- ProtClustDB:   PRK05456
- HAMAP:   MF_00248
- InterPro:   IPR022281
- InterPro:   IPR001353
- TIGRFAMs:   TIGR03692

Pfam domain/function: PF00227 Proteasome

EC number: 3.4.25.-

Molecular weight: Translated: 19450; Mature: 19319

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: ACT_SITE 7-7

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNFHATTIFAVHHNGECAMAGDGQVTMGNAVVMKHTARKVRKLFQGKVLAGFAGSVADA
CCCEEEEEEEEEEECCEEEEECCCCEEECCEEEHHHHHHHHHHHHCCCEEECCCCHHHHH
FTLFEMFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMLIVMDKTTMLLVSGTGEVI
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCEEEEEECCCCEE
EPDDGILAIGSGGNYALSAGRALKQYASEHLTAKQIAKASLEIAGDICVYTNHNIIVEEL
CCCCCEEEEECCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCEEEEEEC
>Mature Secondary Structure 
GNFHATTIFAVHHNGECAMAGDGQVTMGNAVVMKHTARKVRKLFQGKVLAGFAGSVADA
CCEEEEEEEEEEECCEEEEECCCCEEECCEEEHHHHHHHHHHHHCCCEEECCCCHHHHH
FTLFEMFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMLIVMDKTTMLLVSGTGEVI
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCEEEEEECCCCEE
EPDDGILAIGSGGNYALSAGRALKQYASEHLTAKQIAKASLEIAGDICVYTNHNIIVEEL
CCCCCEEEEECCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA