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The map label for this gene is yoeC [H]

Identifier: 218902125

GI number: 218902125

Start: 975480

End: 976031

Strand: Direct

Name: yoeC [H]

Synonym: BCAH820_1007

Alternate gene names: 218902125

Gene position: 975480-976031 (Clockwise)

Preceding gene: 218902124

Following gene: 218902126

Centisome position: 18.4

GC content: 27.36

Gene sequence:

>552_bases
ATGCAATTTGTTCATCCTATAAAACGTATAGAAGATATTCAAAAGATGGAAAAATCATTGATGTGCTATTGTTCATATCG
AGATTATTTTATGTTCGTTTTTGGTATTCATACAGGATTAAGAATTAGTGATATATTGCCACTGAAAGTAAAAGATGTTA
AAGGAAAACAATATTTACTTTTAATAGGGGATAAGTGTGAAAAAATAAAAAAGATAGTATTAGATGATGTTTTAATATCG
GTTATTTTAGAGTATATACAAGACAAACAGGATGATGAATGGCTTTTTCCAAGTAGAAATGGTAATGAACATATTTCAAG
AGTACAAGCATACCGTGCTTTAAATAAGGCAGCACAAAAAATAGGTATGGATAGAATAGGAACTCACACATTGAGAAAAA
CATTTGGTTATCATTATTATAGAAAAACTAAAGATATTAGTACATTAATGGAATTTTTTAATCATTCCTGCAAGAATGTA
ACTAGAAAGTATATAGATATTTTTGAGGAAGAACAATCTAATACAGCTGAATTGAACAGAATTATTTCCTAA

Upstream 100 bases:

>100_bases
TCTAATATTGAATATATGGTAATGTATCCTCTTTTGTTGACCTACCTATTCTCGATATGTTAATTTAAATGTAACATATC
GAGAATAGGTAGGGTAAGGT

Downstream 100 bases:

>100_bases
TAATGACTGAAGATTTCTCAATTATTAGGGTGATATAATAAATTAAAAAGAGGATTTTTTTGGTTAGAAGGAGAGAACTT
TAATGACTGTAAAGTATAAA

Product: site-specific recombinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MQFVHPIKRIEDIQKMEKSLMCYCSYRDYFMFVFGIHTGLRISDILPLKVKDVKGKQYLLLIGDKCEKIKKIVLDDVLIS
VILEYIQDKQDDEWLFPSRNGNEHISRVQAYRALNKAAQKIGMDRIGTHTLRKTFGYHYYRKTKDISTLMEFFNHSCKNV
TRKYIDIFEEEQSNTAELNRIIS

Sequences:

>Translated_183_residues
MQFVHPIKRIEDIQKMEKSLMCYCSYRDYFMFVFGIHTGLRISDILPLKVKDVKGKQYLLLIGDKCEKIKKIVLDDVLIS
VILEYIQDKQDDEWLFPSRNGNEHISRVQAYRALNKAAQKIGMDRIGTHTLRKTFGYHYYRKTKDISTLMEFFNHSCKNV
TRKYIDIFEEEQSNTAELNRIIS
>Mature_183_residues
MQFVHPIKRIEDIQKMEKSLMCYCSYRDYFMFVFGIHTGLRISDILPLKVKDVKGKQYLLLIGDKCEKIKKIVLDDVLIS
VILEYIQDKQDDEWLFPSRNGNEHISRVQAYRALNKAAQKIGMDRIGTHTLRKTFGYHYYRKTKDISTLMEFFNHSCKNV
TRKYIDIFEEEQSNTAELNRIIS

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 21713; Mature: 21713

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFVHPIKRIEDIQKMEKSLMCYCSYRDYFMFVFGIHTGLRISDILPLKVKDVKGKQYLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEECCCCCEEEE
LIGDKCEKIKKIVLDDVLISVILEYIQDKQDDEWLFPSRNGNEHISRVQAYRALNKAAQK
EECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
IGMDRIGTHTLRKTFGYHYYRKTKDISTLMEFFNHSCKNVTRKYIDIFEEEQSNTAELNR
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
IIS
HCC
>Mature Secondary Structure
MQFVHPIKRIEDIQKMEKSLMCYCSYRDYFMFVFGIHTGLRISDILPLKVKDVKGKQYLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEECCCCCEEEE
LIGDKCEKIKKIVLDDVLISVILEYIQDKQDDEWLFPSRNGNEHISRVQAYRALNKAAQK
EECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
IGMDRIGTHTLRKTFGYHYYRKTKDISTLMEFFNHSCKNVTRKYIDIFEEEQSNTAELNR
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
IIS
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]