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The map label for this gene is 218884727

Identifier: 218884727

GI number: 218884727

Start: 1315723

End: 1316004

Strand: Direct

Name: 218884727

Synonym: DKAM_1416

Alternate gene names: NA

Gene position: 1315723-1316004 (Clockwise)

Preceding gene: 218884726

Following gene: 218884728

Centisome position: 96.37

GC content: 41.13

Gene sequence:

>282_bases
ATGGAGATACGTGTTGTATCCAGGAGTGAGAGAGAATTAGTGTTAGAAATATATGATGAAGACCATACACTTGGCAATCT
ATTAGCGAAGGAGGCGATAAGACATCCCGGTGTAGAATATGCAGCATACAGGGTTCCACACCCTCTTAAAAACATGTTTG
AGTTCACGATTATAGTTAAGCCGGGTTATACCGTGGAATCAATACTAAGGGATATAGTAAATGGATTAAAGAACTCGCTC
GCTGAGCTTAGAAGGCTTGTAGAGGAGAAGGTAGTTGAGTAG

Upstream 100 bases:

>100_bases
GTCAGGCTTATATGTTTTAAAGCATGAGTGGCGGGATGCAGTAGACTTATTTATTAAGAGTTTTAAACAGCAAAACGAAT
AGGGGTCAAAGGTGTTTTAA

Downstream 100 bases:

>100_bases
GAAAAGCGAGACACGTATACTTGTCTATGGTGTTACAGAGAGATACGGTGTCTTTGCAACTTATAGGGGAAATTTTTAGA
GGAGTTAAAAATACTAAGGG

Product: DNA-directed RNA polymerase subunit L

Products: NA

Alternate protein names: DNA-Directed RNA Polymerase Subunit L

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MEIRVVSRSERELVLEIYDEDHTLGNLLAKEAIRHPGVEYAAYRVPHPLKNMFEFTIIVKPGYTVESILRDIVNGLKNSL
AELRRLVEEKVVE

Sequences:

>Translated_93_residues
MEIRVVSRSERELVLEIYDEDHTLGNLLAKEAIRHPGVEYAAYRVPHPLKNMFEFTIIVKPGYTVESILRDIVNGLKNSL
AELRRLVEEKVVE
>Mature_93_residues
MEIRVVSRSERELVLEIYDEDHTLGNLLAKEAIRHPGVEYAAYRVPHPLKNMFEFTIIVKPGYTVESILRDIVNGLKNSL
AELRRLVEEKVVE

Specific function: Unknown

COG id: COG1761

COG function: function code K; DNA-directed RNA polymerase, subunit L

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10761; Mature: 10761

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: PS01154 RNA_POL_L_13KD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIRVVSRSERELVLEIYDEDHTLGNLLAKEAIRHPGVEYAAYRVPHPLKNMFEFTIIVK
CCEEECCCCCHHHEEHHHCCCCHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHEEEEEC
PGYTVESILRDIVNGLKNSLAELRRLVEEKVVE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEIRVVSRSERELVLEIYDEDHTLGNLLAKEAIRHPGVEYAAYRVPHPLKNMFEFTIIVK
CCEEECCCCCHHHEEHHHCCCCHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHEEEEEC
PGYTVESILRDIVNGLKNSLAELRRLVEEKVVE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA