Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884726

Identifier: 218884726

GI number: 218884726

Start: 1315087

End: 1315704

Strand: Direct

Name: 218884726

Synonym: DKAM_1415

Alternate gene names: NA

Gene position: 1315087-1315704 (Clockwise)

Preceding gene: 218884725

Following gene: 218884727

Centisome position: 96.33

GC content: 43.37

Gene sequence:

>618_bases
TTGCCACTGGTTAAGCGGAGATATAGGATTCCATGTAGAGGCGAAGAATGTTTAAAATTATACGAGCTTGTCAAGGAGAG
GGTTCCCTCAATAGAGCATGTTGAGTTCGCGGTAACCAGTAACGGCTTAATAGTAGATGCCTACGGATATGAAACAGACC
TGAAAAAACTGTGGATTGAGTTAAAGAATTATTCAAGGATGGCTAAGGGGGTCAGTGGGCCGGGTTTACAAGCATTCAGC
ATTGACGTGATAGTTAAATTAACCAGGAAGACCTTCCCGCCCGAGGTGCTCGTGAAAATCCTTGAGAAACAAGGGTATAA
GGCTAGACTCGAGGATGGCACCATTTACACCAATATAGAGAAGAACAGGATTCTCGAATTAGTTGAGAGAATAAGTGAAT
TAAACACCGCTATTAGAGGCAGGGTGAAGGGTACAGCAGCAAGGTATTTCATCATAACGGTAACCATTATAACAGGGCTA
CAGTTAGATGACGCCATAAATCACGCAGTGGAAGCAGGGCTCCTCGGGGTCGACGAGTCAGGCTTATATGTTTTAAAGCA
TGAGTGGCGGGATGCAGTAGACTTATTTATTAAGAGTTTTAAACAGCAAAACGAATAG

Upstream 100 bases:

>100_bases
CTGCTCTACAAGAGCAATGATAAATTAGTGTGTAATACATGCGGGAATATTGAGAAACGTAAAACCAGTTTAAACTATAT
ACACGTCTCAAGGTGATCGC

Downstream 100 bases:

>100_bases
GGGTCAAAGGTGTTTTAAATGGAGATACGTGTTGTATCCAGGAGTGAGAGAGAATTAGTGTTAGAAATATATGATGAAGA
CCATACACTTGGCAATCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MPLVKRRYRIPCRGEECLKLYELVKERVPSIEHVEFAVTSNGLIVDAYGYETDLKKLWIELKNYSRMAKGVSGPGLQAFS
IDVIVKLTRKTFPPEVLVKILEKQGYKARLEDGTIYTNIEKNRILELVERISELNTAIRGRVKGTAARYFIITVTIITGL
QLDDAINHAVEAGLLGVDESGLYVLKHEWRDAVDLFIKSFKQQNE

Sequences:

>Translated_205_residues
MPLVKRRYRIPCRGEECLKLYELVKERVPSIEHVEFAVTSNGLIVDAYGYETDLKKLWIELKNYSRMAKGVSGPGLQAFS
IDVIVKLTRKTFPPEVLVKILEKQGYKARLEDGTIYTNIEKNRILELVERISELNTAIRGRVKGTAARYFIITVTIITGL
QLDDAINHAVEAGLLGVDESGLYVLKHEWRDAVDLFIKSFKQQNE
>Mature_204_residues
PLVKRRYRIPCRGEECLKLYELVKERVPSIEHVEFAVTSNGLIVDAYGYETDLKKLWIELKNYSRMAKGVSGPGLQAFSI
DVIVKLTRKTFPPEVLVKILEKQGYKARLEDGTIYTNIEKNRILELVERISELNTAIRGRVKGTAARYFIITVTIITGLQ
LDDAINHAVEAGLLGVDESGLYVLKHEWRDAVDLFIKSFKQQNE

Specific function: Unknown

COG id: COG3286

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23384; Mature: 23252

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLVKRRYRIPCRGEECLKLYELVKERVPSIEHVEFAVTSNGLIVDAYGYETDLKKLWIE
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHEEEEEECCCEEEEECCCHHHHHHHHHH
LKNYSRMAKGVSGPGLQAFSIDVIVKLTRKTFPPEVLVKILEKQGYKARLEDGTIYTNIE
HHHHHHHHCCCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCCEEEECCC
KNRILELVERISELNTAIRGRVKGTAARYFIITVTIITGLQLDDAINHAVEAGLLGVDES
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEEHHHCCCHHHHHHHHHHHCCCCCCCC
GLYVLKHEWRDAVDLFIKSFKQQNE
CEEEEHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PLVKRRYRIPCRGEECLKLYELVKERVPSIEHVEFAVTSNGLIVDAYGYETDLKKLWIE
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHEEEEEECCCEEEEECCCHHHHHHHHHH
LKNYSRMAKGVSGPGLQAFSIDVIVKLTRKTFPPEVLVKILEKQGYKARLEDGTIYTNIE
HHHHHHHHCCCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCCEEEECCC
KNRILELVERISELNTAIRGRVKGTAARYFIITVTIITGLQLDDAINHAVEAGLLGVDES
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEEHHHCCCHHHHHHHHHHHCCCCCCCC
GLYVLKHEWRDAVDLFIKSFKQQNE
CEEEEHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA