| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884726
Identifier: 218884726
GI number: 218884726
Start: 1315087
End: 1315704
Strand: Direct
Name: 218884726
Synonym: DKAM_1415
Alternate gene names: NA
Gene position: 1315087-1315704 (Clockwise)
Preceding gene: 218884725
Following gene: 218884727
Centisome position: 96.33
GC content: 43.37
Gene sequence:
>618_bases TTGCCACTGGTTAAGCGGAGATATAGGATTCCATGTAGAGGCGAAGAATGTTTAAAATTATACGAGCTTGTCAAGGAGAG GGTTCCCTCAATAGAGCATGTTGAGTTCGCGGTAACCAGTAACGGCTTAATAGTAGATGCCTACGGATATGAAACAGACC TGAAAAAACTGTGGATTGAGTTAAAGAATTATTCAAGGATGGCTAAGGGGGTCAGTGGGCCGGGTTTACAAGCATTCAGC ATTGACGTGATAGTTAAATTAACCAGGAAGACCTTCCCGCCCGAGGTGCTCGTGAAAATCCTTGAGAAACAAGGGTATAA GGCTAGACTCGAGGATGGCACCATTTACACCAATATAGAGAAGAACAGGATTCTCGAATTAGTTGAGAGAATAAGTGAAT TAAACACCGCTATTAGAGGCAGGGTGAAGGGTACAGCAGCAAGGTATTTCATCATAACGGTAACCATTATAACAGGGCTA CAGTTAGATGACGCCATAAATCACGCAGTGGAAGCAGGGCTCCTCGGGGTCGACGAGTCAGGCTTATATGTTTTAAAGCA TGAGTGGCGGGATGCAGTAGACTTATTTATTAAGAGTTTTAAACAGCAAAACGAATAG
Upstream 100 bases:
>100_bases CTGCTCTACAAGAGCAATGATAAATTAGTGTGTAATACATGCGGGAATATTGAGAAACGTAAAACCAGTTTAAACTATAT ACACGTCTCAAGGTGATCGC
Downstream 100 bases:
>100_bases GGGTCAAAGGTGTTTTAAATGGAGATACGTGTTGTATCCAGGAGTGAGAGAGAATTAGTGTTAGAAATATATGATGAAGA CCATACACTTGGCAATCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MPLVKRRYRIPCRGEECLKLYELVKERVPSIEHVEFAVTSNGLIVDAYGYETDLKKLWIELKNYSRMAKGVSGPGLQAFS IDVIVKLTRKTFPPEVLVKILEKQGYKARLEDGTIYTNIEKNRILELVERISELNTAIRGRVKGTAARYFIITVTIITGL QLDDAINHAVEAGLLGVDESGLYVLKHEWRDAVDLFIKSFKQQNE
Sequences:
>Translated_205_residues MPLVKRRYRIPCRGEECLKLYELVKERVPSIEHVEFAVTSNGLIVDAYGYETDLKKLWIELKNYSRMAKGVSGPGLQAFS IDVIVKLTRKTFPPEVLVKILEKQGYKARLEDGTIYTNIEKNRILELVERISELNTAIRGRVKGTAARYFIITVTIITGL QLDDAINHAVEAGLLGVDESGLYVLKHEWRDAVDLFIKSFKQQNE >Mature_204_residues PLVKRRYRIPCRGEECLKLYELVKERVPSIEHVEFAVTSNGLIVDAYGYETDLKKLWIELKNYSRMAKGVSGPGLQAFSI DVIVKLTRKTFPPEVLVKILEKQGYKARLEDGTIYTNIEKNRILELVERISELNTAIRGRVKGTAARYFIITVTIITGLQ LDDAINHAVEAGLLGVDESGLYVLKHEWRDAVDLFIKSFKQQNE
Specific function: Unknown
COG id: COG3286
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23384; Mature: 23252
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLVKRRYRIPCRGEECLKLYELVKERVPSIEHVEFAVTSNGLIVDAYGYETDLKKLWIE CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHEEEEEECCCEEEEECCCHHHHHHHHHH LKNYSRMAKGVSGPGLQAFSIDVIVKLTRKTFPPEVLVKILEKQGYKARLEDGTIYTNIE HHHHHHHHCCCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCCEEEECCC KNRILELVERISELNTAIRGRVKGTAARYFIITVTIITGLQLDDAINHAVEAGLLGVDES HHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEEHHHCCCHHHHHHHHHHHCCCCCCCC GLYVLKHEWRDAVDLFIKSFKQQNE CEEEEHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PLVKRRYRIPCRGEECLKLYELVKERVPSIEHVEFAVTSNGLIVDAYGYETDLKKLWIE CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHEEEEEECCCEEEEECCCHHHHHHHHHH LKNYSRMAKGVSGPGLQAFSIDVIVKLTRKTFPPEVLVKILEKQGYKARLEDGTIYTNIE HHHHHHHHCCCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCCEEEECCC KNRILELVERISELNTAIRGRVKGTAARYFIITVTIITGLQLDDAINHAVEAGLLGVDES HHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEEHHHCCCHHHHHHHHHHHCCCCCCCC GLYVLKHEWRDAVDLFIKSFKQQNE CEEEEHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA