| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884724
Identifier: 218884724
GI number: 218884724
Start: 1313892
End: 1314530
Strand: Direct
Name: 218884724
Synonym: DKAM_1413
Alternate gene names: NA
Gene position: 1313892-1314530 (Clockwise)
Preceding gene: 218884723
Following gene: 218884725
Centisome position: 96.24
GC content: 46.79
Gene sequence:
>639_bases ATGGGGCTTATTAGGAGTAAGAAGGAGCTAGAGTTGATTCTCTCACGGATCAACTGGTACATGCACTCGAAGAAGAGGCT TGAGCAATACCAGACACCGTCAAGCATAGTGGCGCATATGGTTTGGACAGCGTATATGAGGGGCGACGTGAAGGGGTTGA CGATAGGTGATTATGGATGTGGCGATGGGAGAATATCTATTGCGTCGATACTGATGGGTGCTCGTAGAGCTATCTGTGTA GATATTGATGAAGATATATTACTATATGGTTTAGGTACAGTATCATCCTTGTTTCCAGGTGCAGCGGGCAGGATTCTCTA CGTGGATGCCGACGTGGAGCGTTTAGGACTCAAGAATGTTGACACAGTGTTGATGAACCCTCCTTTTGGCGTGGTCGCTG AAAACAGGGGCTTGGACATAGTCTTCCTTAGGAGGGCTATGGCGACGGCTAGAAGCATATATAGTATACACAAGTATTCT GAGGCATTCATGGATATCGCTAGGGAGGTGGCCGAGGACAACGGGTTTACCCTGGACTCGTATGAGCTACTGGACTTTGA AATACCAATGATGTTTGAGACCCATAGGAGGCGAATATATAGGGTTAAAACAGTATTCATTATCCTGACAAGGGCGTGA
Upstream 100 bases:
>100_bases CATAGACGACTTAGATGACTTCTATAAGCCGGTGTTAACCCCTGGCGAATTCCTGATGCTTCTAACAGGCTCGGAGAAAT ATGTATACCCGTGGTGAGCA
Downstream 100 bases:
>100_bases TTAATTATGCAAGAGATAGTGATGCCTGGCGAACCACTTGCAGTAGAGGAGGAGGCACTGCCTCTCCAAGGTGCATACAT TGATGAAAAGGGCTTGATCA
Product: putative DNA methylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MGLIRSKKELELILSRINWYMHSKKRLEQYQTPSSIVAHMVWTAYMRGDVKGLTIGDYGCGDGRISIASILMGARRAICV DIDEDILLYGLGTVSSLFPGAAGRILYVDADVERLGLKNVDTVLMNPPFGVVAENRGLDIVFLRRAMATARSIYSIHKYS EAFMDIAREVAEDNGFTLDSYELLDFEIPMMFETHRRRIYRVKTVFIILTRA
Sequences:
>Translated_212_residues MGLIRSKKELELILSRINWYMHSKKRLEQYQTPSSIVAHMVWTAYMRGDVKGLTIGDYGCGDGRISIASILMGARRAICV DIDEDILLYGLGTVSSLFPGAAGRILYVDADVERLGLKNVDTVLMNPPFGVVAENRGLDIVFLRRAMATARSIYSIHKYS EAFMDIAREVAEDNGFTLDSYELLDFEIPMMFETHRRRIYRVKTVFIILTRA >Mature_211_residues GLIRSKKELELILSRINWYMHSKKRLEQYQTPSSIVAHMVWTAYMRGDVKGLTIGDYGCGDGRISIASILMGARRAICVD IDEDILLYGLGTVSSLFPGAAGRILYVDADVERLGLKNVDTVLMNPPFGVVAENRGLDIVFLRRAMATARSIYSIHKYSE AFMDIAREVAEDNGFTLDSYELLDFEIPMMFETHRRRIYRVKTVFIILTRA
Specific function: Unknown
COG id: COG2263
COG function: function code J; Predicted RNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI92859575, Length=201, Percent_Identity=30.8457711442786, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI221512926, Length=160, Percent_Identity=38.75, Blast_Score=88, Evalue=4e-18, Organism=Drosophila melanogaster, GI28574609, Length=160, Percent_Identity=38.75, Blast_Score=88, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010456 [H]
Pfam domain/function: PF06325 PrmA [H]
EC number: NA
Molecular weight: Translated: 24052; Mature: 23921
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLIRSKKELELILSRINWYMHSKKRLEQYQTPSSIVAHMVWTAYMRGDVKGLTIGDYGC CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCCCC GDGRISIASILMGARRAICVDIDEDILLYGLGTVSSLFPGAAGRILYVDADVERLGLKNV CCCCHHHHHHHHHCCCEEEEECCCCEEEEECHHHHHHCCCCCCEEEEEECCHHHCCCCCC DTVLMNPPFGVVAENRGLDIVFLRRAMATARSIYSIHKYSEAFMDIAREVAEDNGFTLDS CEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC YELLDFEIPMMFETHRRRIYRVKTVFIILTRA EEEEEEECCHHHHHHHHHHHEEEEEEEEEECC >Mature Secondary Structure GLIRSKKELELILSRINWYMHSKKRLEQYQTPSSIVAHMVWTAYMRGDVKGLTIGDYGC CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCCCC GDGRISIASILMGARRAICVDIDEDILLYGLGTVSSLFPGAAGRILYVDADVERLGLKNV CCCCHHHHHHHHHCCCEEEEECCCCEEEEECHHHHHHCCCCCCEEEEEECCHHHCCCCCC DTVLMNPPFGVVAENRGLDIVFLRRAMATARSIYSIHKYSEAFMDIAREVAEDNGFTLDS CEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC YELLDFEIPMMFETHRRRIYRVKTVFIILTRA EEEEEEECCHHHHHHHHHHHEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]