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The map label for this gene is yhgF [C]

Identifier: 218884725

GI number: 218884725

Start: 1314537

End: 1315082

Strand: Direct

Name: yhgF [C]

Synonym: DKAM_1414

Alternate gene names: 218884725

Gene position: 1314537-1315082 (Clockwise)

Preceding gene: 218884724

Following gene: 218884726

Centisome position: 96.29

GC content: 43.04

Gene sequence:

>546_bases
ATGCAAGAGATAGTGATGCCTGGCGAACCACTTGCAGTAGAGGAGGAGGCACTGCCTCTCCAAGGTGCATACATTGATGA
AAAGGGCTTGATCAGGTCCCAGGTATTCGGGTTAAAGGTCTTCGATAGATATAAGAAGCAAGTATATGTTAGACAAGTGA
AAAACATAGAGTTGATTAAGCCGGGAACCATTGTCGAAGCATATGTCGAGGCCGTGACTGATGAGCTGGCTTTTCTAAAG
ATATATAGTATAGAAGGGCAAAGAGTTGAAGCCTCCGGGATTATACATGTATCGCAGGCATCCAATGAGTTTACACAGAG
CCTTCTAGGGGCCATTAGACCAGGTGACTTCGTTAAGGCTAAGGTGCTCAATAATTCTATACCATACCAATTAACCATTA
AGGAACCAGGATTAGGCGTTATAGAGGCGTATTGCAGTGTATGCGGCTCCCTGCTCTACAAGAGCAATGATAAATTAGTG
TGTAATACATGCGGGAATATTGAGAAACGTAAAACCAGTTTAAACTATATACACGTCTCAAGGTGA

Upstream 100 bases:

>100_bases
GCTACTGGACTTTGAAATACCAATGATGTTTGAGACCCATAGGAGGCGAATATATAGGGTTAAAACAGTATTCATTATCC
TGACAAGGGCGTGATTAATT

Downstream 100 bases:

>100_bases
TCGCTTGCCACTGGTTAAGCGGAGATATAGGATTCCATGTAGAGGCGAAGAATGTTTAAAATTATACGAGCTTGTCAAGG
AGAGGGTTCCCTCAATAGAG

Product: putative RNA-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MQEIVMPGEPLAVEEEALPLQGAYIDEKGLIRSQVFGLKVFDRYKKQVYVRQVKNIELIKPGTIVEAYVEAVTDELAFLK
IYSIEGQRVEASGIIHVSQASNEFTQSLLGAIRPGDFVKAKVLNNSIPYQLTIKEPGLGVIEAYCSVCGSLLYKSNDKLV
CNTCGNIEKRKTSLNYIHVSR

Sequences:

>Translated_181_residues
MQEIVMPGEPLAVEEEALPLQGAYIDEKGLIRSQVFGLKVFDRYKKQVYVRQVKNIELIKPGTIVEAYVEAVTDELAFLK
IYSIEGQRVEASGIIHVSQASNEFTQSLLGAIRPGDFVKAKVLNNSIPYQLTIKEPGLGVIEAYCSVCGSLLYKSNDKLV
CNTCGNIEKRKTSLNYIHVSR
>Mature_181_residues
MQEIVMPGEPLAVEEEALPLQGAYIDEKGLIRSQVFGLKVFDRYKKQVYVRQVKNIELIKPGTIVEAYVEAVTDELAFLK
IYSIEGQRVEASGIIHVSQASNEFTQSLLGAIRPGDFVKAKVLNNSIPYQLTIKEPGLGVIEAYCSVCGSLLYKSNDKLV
CNTCGNIEKRKTSLNYIHVSR

Specific function: Unknown

COG id: COG1096

COG function: function code J; Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20141; Mature: 20141

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEIVMPGEPLAVEEEALPLQGAYIDEKGLIRSQVFGLKVFDRYKKQVYVRQVKNIELIK
CCCCCCCCCCCEECCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEC
PGTIVEAYVEAVTDELAFLKIYSIEGQRVEASGIIHVSQASNEFTQSLLGAIRPGDFVKA
CCHHHHHHHHHHHHHHEEEEEEECCCCEEECCCEEEEECCCHHHHHHHHHHCCCCCCEEE
KVLNNSIPYQLTIKEPGLGVIEAYCSVCGSLLYKSNDKLVCNTCGNIEKRKTSLNYIHVS
EEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHCEEEEEEEC
R
C
>Mature Secondary Structure
MQEIVMPGEPLAVEEEALPLQGAYIDEKGLIRSQVFGLKVFDRYKKQVYVRQVKNIELIK
CCCCCCCCCCCEECCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEC
PGTIVEAYVEAVTDELAFLKIYSIEGQRVEASGIIHVSQASNEFTQSLLGAIRPGDFVKA
CCHHHHHHHHHHHHHHEEEEEEECCCCEEECCCEEEEECCCHHHHHHHHHHCCCCCCEEE
KVLNNSIPYQLTIKEPGLGVIEAYCSVCGSLLYKSNDKLVCNTCGNIEKRKTSLNYIHVS
EEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHCEEEEEEEC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA