| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884551
Identifier: 218884551
GI number: 218884551
Start: 1161666
End: 1162760
Strand: Direct
Name: 218884551
Synonym: DKAM_1240
Alternate gene names: NA
Gene position: 1161666-1162760 (Clockwise)
Preceding gene: 218884550
Following gene: 218884552
Centisome position: 85.09
GC content: 45.57
Gene sequence:
>1095_bases ATGGATGGCGATACCGCTTCACTAATAATACAGGTTATCTGGCTTATAATGTTCTTTCTAATTATAACCGGGTTGAACCA GAAGATACAGATGAAGATTTGGGTCACAGATATAAGAATGAAGCTGGATTTGATCAAGGGCATACTGGAGGAGGATAAGC AGAAGACTAAAGTTATGCTTAGAAACCTCGGTATTCAATCACCGGAGCCGCTTATCGATAGGGTCATCGAGTTCTTCACT ATAGAACCCGTCGGGATAGAGCCTGTTGACATTATAAAGAGGATGGATCACCTGATTCGTATAACAGATACAACTGTGAG AAGGTTAATTGAGGCTGAAATACCCCATGCGGGTAAGTATGAGAGAAGCCTTGTAGAGACAACTCTCTCAATCGTGGGGG CGCTACACGTAATATATAAGGTGGTTAGACACTACCTGCTAACCGGCGAGAAGGAGAATAATTGGATACTGATAATGCAG CTACAGCTCCAGATGCCGCAGATACTGAAATACGTGAACACGTATCATGAAGCGTTCGACGCCTTTGCAACGGGTAAGCC TATAGGCGATGGAATCGGCCCCCTGGTAGCTTATAGGCTGATAGAATCCGGGAGGAAGATATCATCAAGGATTCTAGATG ATACCTCGATAACCGAGGTCTGGTATAAAGATAGAAGGATCTATGTTGTGAAAGCTGAGGGGCCTGGAAGCAATGTGGGT CATCCGGGTGCGGTGATAAATAGATTGGTAGACGAGCTCAAGGGCAGTGTTGACTTAATGATCACGGTGGATGCTGCATT AAAGCTCGAGGGCGAGAAATCAGGCTCGATAGCTGAGGGAGTTGGGGCAGCAATAGGCGATCCCGGTCCTGAGAAAATAG CTATTGAGAGGGCGGCATCTAAATATGGAATTCCATTAAGGGCGCTTGTCATCAAGATGGATCTTCGCGAGGCGATAACG GTTATGCGTAAGGAGATATTTGAAGCAGCTGACTCAACCCTAAAGTACCTTGAAAGAATTATAGAGGAGCATACAAAACC GAATTCAACGATAATAGTTGCCGGGATAGGGAATACCATGGGGATACCCGGGTGA
Upstream 100 bases:
>100_bases ATTTATAATACTTCATAGGGAAGTTATTGTTACGACTATTTAAATCTCTCTTCTAATAAATATCATGGCTAATGAGAAGA ATACAGTAGCGGTGAATTAG
Downstream 100 bases:
>100_bases ATGGTATGAGTATAGACCTGAACACCTTATCTAATATAATAATGGTAATACTGATGGTGATACTTATAGTCTACCTCTAC TTGGAGTCTCGCCCAAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MDGDTASLIIQVIWLIMFFLIITGLNQKIQMKIWVTDIRMKLDLIKGILEEDKQKTKVMLRNLGIQSPEPLIDRVIEFFT IEPVGIEPVDIIKRMDHLIRITDTTVRRLIEAEIPHAGKYERSLVETTLSIVGALHVIYKVVRHYLLTGEKENNWILIMQ LQLQMPQILKYVNTYHEAFDAFATGKPIGDGIGPLVAYRLIESGRKISSRILDDTSITEVWYKDRRIYVVKAEGPGSNVG HPGAVINRLVDELKGSVDLMITVDAALKLEGEKSGSIAEGVGAAIGDPGPEKIAIERAASKYGIPLRALVIKMDLREAIT VMRKEIFEAADSTLKYLERIIEEHTKPNSTIIVAGIGNTMGIPG
Sequences:
>Translated_364_residues MDGDTASLIIQVIWLIMFFLIITGLNQKIQMKIWVTDIRMKLDLIKGILEEDKQKTKVMLRNLGIQSPEPLIDRVIEFFT IEPVGIEPVDIIKRMDHLIRITDTTVRRLIEAEIPHAGKYERSLVETTLSIVGALHVIYKVVRHYLLTGEKENNWILIMQ LQLQMPQILKYVNTYHEAFDAFATGKPIGDGIGPLVAYRLIESGRKISSRILDDTSITEVWYKDRRIYVVKAEGPGSNVG HPGAVINRLVDELKGSVDLMITVDAALKLEGEKSGSIAEGVGAAIGDPGPEKIAIERAASKYGIPLRALVIKMDLREAIT VMRKEIFEAADSTLKYLERIIEEHTKPNSTIIVAGIGNTMGIPG >Mature_364_residues MDGDTASLIIQVIWLIMFFLIITGLNQKIQMKIWVTDIRMKLDLIKGILEEDKQKTKVMLRNLGIQSPEPLIDRVIEFFT IEPVGIEPVDIIKRMDHLIRITDTTVRRLIEAEIPHAGKYERSLVETTLSIVGALHVIYKVVRHYLLTGEKENNWILIMQ LQLQMPQILKYVNTYHEAFDAFATGKPIGDGIGPLVAYRLIESGRKISSRILDDTSITEVWYKDRRIYVVKAEGPGSNVG HPGAVINRLVDELKGSVDLMITVDAALKLEGEKSGSIAEGVGAAIGDPGPEKIAIERAASKYGIPLRALVIKMDLREAIT VMRKEIFEAADSTLKYLERIIEEHTKPNSTIIVAGIGNTMGIPG
Specific function: Unknown
COG id: COG4046
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40643; Mature: 40643
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGDTASLIIQVIWLIMFFLIITGLNQKIQMKIWVTDIRMKLDLIKGILEEDKQKTKVML CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH RNLGIQSPEPLIDRVIEFFTIEPVGIEPVDIIKRMDHLIRITDTTVRRLIEAEIPHAGKY HHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEHHHHHHHHHHHHCCCCCCHH ERSLVETTLSIVGALHVIYKVVRHYLLTGEKENNWILIMQLQLQMPQILKYVNTYHEAFD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH AFATGKPIGDGIGPLVAYRLIESGRKISSRILDDTSITEVWYKDRRIYVVKAEGPGSNVG HHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHCCCCEEEEEEECCCCCCCC HPGAVINRLVDELKGSVDLMITVDAALKLEGEKSGSIAEGVGAAIGDPGPEKIAIERAAS CCHHHHHHHHHHHCCCEEEEEEEEEEEEECCCCCCCHHHHCCHHCCCCCCHHHHHHHHHH KYGIPLRALVIKMDLREAITVMRKEIFEAADSTLKYLERIIEEHTKPNSTIIVAGIGNTM HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC GIPG CCCC >Mature Secondary Structure MDGDTASLIIQVIWLIMFFLIITGLNQKIQMKIWVTDIRMKLDLIKGILEEDKQKTKVML CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH RNLGIQSPEPLIDRVIEFFTIEPVGIEPVDIIKRMDHLIRITDTTVRRLIEAEIPHAGKY HHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEHHHHHHHHHHHHCCCCCCHH ERSLVETTLSIVGALHVIYKVVRHYLLTGEKENNWILIMQLQLQMPQILKYVNTYHEAFD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH AFATGKPIGDGIGPLVAYRLIESGRKISSRILDDTSITEVWYKDRRIYVVKAEGPGSNVG HHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHCCCCEEEEEEECCCCCCCC HPGAVINRLVDELKGSVDLMITVDAALKLEGEKSGSIAEGVGAAIGDPGPEKIAIERAAS CCHHHHHHHHHHHCCCEEEEEEEEEEEEECCCCCCCHHHHCCHHCCCCCCHHHHHHHHHH KYGIPLRALVIKMDLREAITVMRKEIFEAADSTLKYLERIIEEHTKPNSTIIVAGIGNTM HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC GIPG CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA