Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is 218884304
Identifier: 218884304
GI number: 218884304
Start: 940238
End: 940711
Strand: Direct
Name: 218884304
Synonym: DKAM_0993
Alternate gene names: NA
Gene position: 940238-940711 (Clockwise)
Preceding gene: 218884303
Following gene: 218884305
Centisome position: 68.87
GC content: 45.36
Gene sequence:
>474_bases ATGGACCCATTAGCCATGGGGCTTATGTATTTAGCAGCAGCATTACCATTAGCTGGCGGTATCACTGGTTCAACAACAGG TATGAGGCATGCAGCCAGTATAGGTGCATCGGTTCTAGCAGAGGACCCAACTCAGTTCAGGAATGTATTAATCTTGGCTG CACTACCAATGACTCAGACCTTCTATGGTTTAATACAAATGATCTATATGATGCTGATGTATATACCTAACTTACCATTG GACAGCATTAACATGACGAAAGCACTCGCATTAATCGGCATCGGGCTAGCTGGTTTCCTAGCCGAATACCTATCTGCCTG GGCACAGGGAATAATATGCGCCAACGGTATTGCTGAGTTACCTAGAACAAAGGGCAGCAACCTCATGAGCTCGATCGTGC TTGCAGCATATGTAGAGCTATGGGGTATATTAGGCATAGTATTCACGATTCTCGGTCTATCCTTACTTGGGTGA
Upstream 100 bases:
>100_bases CGTATCGTGGTTTCTTAGAAAAGATAAAAGATTATTGAATTTGTTTTTAATCCCCAGATTGGATCTATATAAGAACCAGT TTGCGTATAAGGGTGGTTAA
Downstream 100 bases:
>100_bases CAATAATTGGTGGCACTGGAAAGCGAGGCGATAAAAGCCAGGTTACTCGAGGAGGCAAGGGCTAGGGCAGAGGAGATAGT GAAGGAGGCTGAGAAAGAAG
Product: V-type ATPase subunit K
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MDPLAMGLMYLAAALPLAGGITGSTTGMRHAASIGASVLAEDPTQFRNVLILAALPMTQTFYGLIQMIYMMLMYIPNLPL DSINMTKALALIGIGLAGFLAEYLSAWAQGIICANGIAELPRTKGSNLMSSIVLAAYVELWGILGIVFTILGLSLLG
Sequences:
>Translated_157_residues MDPLAMGLMYLAAALPLAGGITGSTTGMRHAASIGASVLAEDPTQFRNVLILAALPMTQTFYGLIQMIYMMLMYIPNLPL DSINMTKALALIGIGLAGFLAEYLSAWAQGIICANGIAELPRTKGSNLMSSIVLAAYVELWGILGIVFTILGLSLLG >Mature_157_residues MDPLAMGLMYLAAALPLAGGITGSTTGMRHAASIGASVLAEDPTQFRNVLILAALPMTQTFYGLIQMIYMMLMYIPNLPL DSINMTKALALIGIGLAGFLAEYLSAWAQGIICANGIAELPRTKGSNLMSSIVLAAYVELWGILGIVFTILGLSLLG
Specific function: Unknown
COG id: COG0636
COG function: function code C; F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16509; Mature: 16509
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 7.0 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPLAMGLMYLAAALPLAGGITGSTTGMRHAASIGASVLAEDPTQFRNVLILAALPMTQT CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH FYGLIQMIYMMLMYIPNLPLDSINMTKALALIGIGLAGFLAEYLSAWAQGIICANGIAEL HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PRTKGSNLMSSIVLAAYVELWGILGIVFTILGLSLLG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDPLAMGLMYLAAALPLAGGITGSTTGMRHAASIGASVLAEDPTQFRNVLILAALPMTQT CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH FYGLIQMIYMMLMYIPNLPLDSINMTKALALIGIGLAGFLAEYLSAWAQGIICANGIAEL HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PRTKGSNLMSSIVLAAYVELWGILGIVFTILGLSLLG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA