Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is atpE [H]
Identifier: 218884305
GI number: 218884305
Start: 940721
End: 941296
Strand: Direct
Name: atpE [H]
Synonym: DKAM_0994
Alternate gene names: 218884305
Gene position: 940721-941296 (Clockwise)
Preceding gene: 218884304
Following gene: 218884306
Centisome position: 68.91
GC content: 44.44
Gene sequence:
>576_bases GTGGCACTGGAAAGCGAGGCGATAAAAGCCAGGTTACTCGAGGAGGCAAGGGCTAGGGCAGAGGAGATAGTGAAGGAGGC TGAGAAAGAAGCAGAGAGGAAGATAAGGGAGGCTGAAGCCTTATGGAGAGAGAAAGCTGAGAAAGAAAGAATGAGGATTA TTAGTGAGGCAGAGAAGGAGGCAAACAACATTGTTTCAGATGCTGTAAGAGAGGCGAGATTCATCATATCGATGGAAGTA GATAATATTATTTCAGACATATTGAATCAAGCATACAGTGTTATAAGAAGCCGCGGATTCGATGTCAAAGCCTCCCTCAA AAACCTGATCACCGAATCTATGAAAGTCATTGACTCACCTAGAAGACTTATTGTTAGTAGAAGAGACCTGGAGACAGCTA GGGAGGTAGTTACTGAGCTGGGATTAACAGGGGTCTCAATAGAGGTAGGCAATATAGAGGGTGGAATAATAGTTGAGTCT GCCAGCGGTATAATAGTGGATAACACGTATGAATCCCGGTTCAAGGAGTTCCAGAACAAGTATCTAAATGAGGTCAGGAG AATACTGTGGGGCTGA
Upstream 100 bases:
>100_bases CATGAGCTCGATCGTGCTTGCAGCATATGTAGAGCTATGGGGTATATTAGGCATAGTATTCACGATTCTCGGTCTATCCT TACTTGGGTGACAATAATTG
Downstream 100 bases:
>100_bases TGCATCCCCATGCTAATCGAATCCTCCAAGCTGTTTTTTACTAGAAGCGACTACATTAACATATTGTCATCACAGAATCT AGAGACAGCGATTGGTTATC
Product: V-type ATPase subunit E
Products: NA
Alternate protein names: V-ATPase subunit E [H]
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MALESEAIKARLLEEARARAEEIVKEAEKEAERKIREAEALWREKAEKERMRIISEAEKEANNIVSDAVREARFIISMEV DNIISDILNQAYSVIRSRGFDVKASLKNLITESMKVIDSPRRLIVSRRDLETAREVVTELGLTGVSIEVGNIEGGIIVES ASGIIVDNTYESRFKEFQNKYLNEVRRILWG
Sequences:
>Translated_191_residues MALESEAIKARLLEEARARAEEIVKEAEKEAERKIREAEALWREKAEKERMRIISEAEKEANNIVSDAVREARFIISMEV DNIISDILNQAYSVIRSRGFDVKASLKNLITESMKVIDSPRRLIVSRRDLETAREVVTELGLTGVSIEVGNIEGGIIVES ASGIIVDNTYESRFKEFQNKYLNEVRRILWG >Mature_190_residues ALESEAIKARLLEEARARAEEIVKEAEKEAERKIREAEALWREKAEKERMRIISEAEKEANNIVSDAVREARFIISMEVD NIISDILNQAYSVIRSRGFDVKASLKNLITESMKVIDSPRRLIVSRRDLETAREVVTELGLTGVSIEVGNIEGGIIVESA SGIIVDNTYESRFKEFQNKYLNEVRRILWG
Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane [H]
COG id: COG1390
COG function: function code C; Archaeal/vacuolar-type H+-ATPase subunit E
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the V-ATPase E subunit family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002842 [H]
Pfam domain/function: PF01991 vATP-synt_E [H]
EC number: NA
Molecular weight: Translated: 21781; Mature: 21650
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALESEAIKARLLEEARARAEEIVKEAEKEAERKIREAEALWREKAEKERMRIISEAEKE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANNIVSDAVREARFIISMEVDNIISDILNQAYSVIRSRGFDVKASLKNLITESMKVIDSP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH RRLIVSRRDLETAREVVTELGLTGVSIEVGNIEGGIIVESASGIIVDNTYESRFKEFQNK HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEECCCCEEEECCHHHHHHHHHHH YLNEVRRILWG HHHHHHHHHCC >Mature Secondary Structure ALESEAIKARLLEEARARAEEIVKEAEKEAERKIREAEALWREKAEKERMRIISEAEKE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANNIVSDAVREARFIISMEVDNIISDILNQAYSVIRSRGFDVKASLKNLITESMKVIDSP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH RRLIVSRRDLETAREVVTELGLTGVSIEVGNIEGGIIVESASGIIVDNTYESRFKEFQNK HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEECCCCEEEECCHHHHHHHHHHH YLNEVRRILWG HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA